data_LP0
# 
_chem_comp.id                                    LP0 
_chem_comp.name                                  "(7Z)-7-(2-amino-1,3-thiazol-4-yl)-1,1,3-trihydroxy-10,10-dimethyl-1,6-dioxo-2,9-dioxa-5,8-diaza-1lambda~5~-phospha-3-boraundec-7-en-11-oic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H16 B N4 O9 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-07-25 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        410.105 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LP0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6PWL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LP0 O5  O1  O 0 1 N N N N N N 15.639 -11.897 43.030 -4.399 2.035  -1.431 O5  LP0 1  
LP0 P1  P1  P 0 1 N N N N N N 16.882 -12.387 42.333 -5.123 1.135  -0.309 P1  LP0 2  
LP0 O2  O2  O 0 1 N N N N N N 17.441 -13.519 43.167 -6.451 1.884  0.206  O2  LP0 3  
LP0 O3  O3  O 0 1 N N N N N N 17.956 -11.330 42.194 -5.490 -0.176 -0.890 O3  LP0 4  
LP0 O20 O4  O 0 1 N N N N N N 16.542 -12.907 40.861 -4.119 0.911  0.929  O20 LP0 5  
LP0 B1  B1  B 0 1 N N N N N N 16.962 -12.194 39.677 -2.909 0.254  0.581  B1  LP0 6  
LP0 O21 O5  O 0 1 N N N N N N 16.798 -10.679 39.724 -2.677 -0.141 -0.763 O21 LP0 7  
LP0 C1  C1  C 0 1 N N N N N N 18.475 -12.584 39.270 -1.828 -0.036 1.682  C1  LP0 8  
LP0 N2  N1  N 0 1 N N N N N N 19.391 -11.494 39.563 -0.682 -0.717 1.074  N2  LP0 9  
LP0 C3  C2  C 0 1 N N N N N N 20.417 -11.183 38.772 0.387  -0.005 0.668  C3  LP0 10 
LP0 O4  O6  O 0 1 N N N N N N 20.724 -11.758 37.730 0.363  1.209  0.718  O4  LP0 11 
LP0 C5  C3  C 0 1 N N N N N N 21.263 -10.067 39.175 1.593  -0.702 0.161  C5  LP0 12 
LP0 N6  N2  N 0 1 N N N N N N 21.883 -10.128 40.280 2.664  -0.021 -0.132 N6  LP0 13 
LP0 O7  O7  O 0 1 N N N N N N 21.748 -11.132 41.042 2.716  1.369  0.137  O7  LP0 14 
LP0 C8  C4  C 0 1 N N N N N N 21.811 -11.051 42.471 3.949  1.987  -0.235 C8  LP0 15 
LP0 C11 C5  C 0 1 N N N N N N 20.718 -10.123 42.952 3.893  3.457  0.095  C11 LP0 16 
LP0 O13 O8  O 0 1 N N N N N N 19.935 -10.484 43.863 4.948  4.244  -0.169 O13 LP0 17 
LP0 O12 O9  O 0 1 N N N N N N 20.640 -8.997  42.416 2.899  3.926  0.598  O12 LP0 18 
LP0 C10 C6  C 0 1 N N N N N N 21.609 -12.453 43.055 5.099  1.335  0.535  C10 LP0 19 
LP0 C9  C7  C 0 1 N N N N N N 23.164 -10.476 42.892 4.175  1.811  -1.738 C9  LP0 20 
LP0 C14 C8  C 0 1 Y N N N N N 21.411 -8.940  38.240 1.580  -2.170 -0.013 C14 LP0 21 
LP0 N18 N3  N 0 1 Y N N N N N 20.947 -8.954  36.930 0.547  -2.925 0.363  N18 LP0 22 
LP0 C17 C9  C 0 1 Y N N N N N 21.255 -7.788  36.308 0.647  -4.201 0.156  C17 LP0 23 
LP0 N19 N4  N 0 1 N N N N N N 20.898 -7.484  34.964 -0.318 -5.140 0.476  N19 LP0 24 
LP0 S16 S1  S 0 1 Y N N N N N 22.111 -6.651  37.273 2.199  -4.554 -0.596 S16 LP0 25 
LP0 C15 C10 C 0 1 Y N N N N N 22.086 -7.757  38.593 2.609  -2.841 -0.567 C15 LP0 26 
LP0 H1  H1  H 0 1 N N N N N N 15.748 -10.984 43.268 -4.130 2.911  -1.119 H1  LP0 27 
LP0 H2  H2  H 0 1 N N N N N N 18.335 -13.317 43.417 -7.102 2.052  -0.489 H2  LP0 28 
LP0 H3  H3  H 0 1 N N N N N N 17.121 -10.351 40.555 -1.827 -0.580 -0.903 H3  LP0 29 
LP0 H4  H4  H 0 1 N N N N N N 18.512 -12.805 38.193 -1.499 0.904  2.125  H4  LP0 30 
LP0 H5  H5  H 0 1 N N N N N N 18.782 -13.474 39.838 -2.259 -0.671 2.456  H5  LP0 31 
LP0 H6  H6  H 0 1 N N N N N N 19.245 -10.955 40.393 -0.694 -1.681 0.963  H6  LP0 32 
LP0 H7  H7  H 0 1 N N N N N N 19.320 -9.784  44.048 4.865  5.180  0.061  H7  LP0 33 
LP0 H8  H8  H 0 1 N N N N N N 21.655 -12.404 44.153 5.140  0.272  0.296  H8  LP0 34 
LP0 H9  H9  H 0 1 N N N N N N 20.627 -12.840 42.747 6.040  1.807  0.251  H9  LP0 35 
LP0 H10 H10 H 0 1 N N N N N N 22.400 -13.122 42.684 4.938  1.461  1.605  H10 LP0 36 
LP0 H11 H11 H 0 1 N N N N N N 23.211 -10.414 43.989 3.356  2.275  -2.286 H11 LP0 37 
LP0 H12 H12 H 0 1 N N N N N N 23.970 -11.130 42.527 5.116  2.283  -2.021 H12 LP0 38 
LP0 H13 H13 H 0 1 N N N N N N 23.284 -9.470  42.463 4.216  0.748  -1.976 H13 LP0 39 
LP0 H14 H14 H 0 1 N N N N N N 20.397 -8.254  34.569 -1.150 -4.860 0.890  H14 LP0 40 
LP0 H15 H15 H 0 1 N N N N N N 20.321 -6.668  34.949 -0.163 -6.079 0.287  H15 LP0 41 
LP0 H16 H16 H 0 1 N N N N N N 22.528 -7.568  39.560 3.525  -2.403 -0.934 H16 LP0 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LP0 N19 C17 SING N N 1  
LP0 C17 N18 DOUB Y N 2  
LP0 C17 S16 SING Y N 3  
LP0 N18 C14 SING Y N 4  
LP0 S16 C15 SING Y N 5  
LP0 O4  C3  DOUB N N 6  
LP0 C14 C15 DOUB Y N 7  
LP0 C14 C5  SING N N 8  
LP0 C3  C5  SING N N 9  
LP0 C3  N2  SING N N 10 
LP0 C5  N6  DOUB N Z 11 
LP0 C1  N2  SING N N 12 
LP0 C1  B1  SING N N 13 
LP0 B1  O21 SING N N 14 
LP0 B1  O20 SING N N 15 
LP0 N6  O7  SING N N 16 
LP0 O20 P1  SING N N 17 
LP0 O7  C8  SING N N 18 
LP0 O3  P1  DOUB N N 19 
LP0 P1  O5  SING N N 20 
LP0 P1  O2  SING N N 21 
LP0 O12 C11 DOUB N N 22 
LP0 C8  C9  SING N N 23 
LP0 C8  C11 SING N N 24 
LP0 C8  C10 SING N N 25 
LP0 C11 O13 SING N N 26 
LP0 O5  H1  SING N N 27 
LP0 O2  H2  SING N N 28 
LP0 O21 H3  SING N N 29 
LP0 C1  H4  SING N N 30 
LP0 C1  H5  SING N N 31 
LP0 N2  H6  SING N N 32 
LP0 O13 H7  SING N N 33 
LP0 C10 H8  SING N N 34 
LP0 C10 H9  SING N N 35 
LP0 C10 H10 SING N N 36 
LP0 C9  H11 SING N N 37 
LP0 C9  H12 SING N N 38 
LP0 C9  H13 SING N N 39 
LP0 N19 H14 SING N N 40 
LP0 N19 H15 SING N N 41 
LP0 C15 H16 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LP0 SMILES           ACDLabs              12.01 "OP(O)(=O)OB(O)CNC(\C(=N/OC(C)(C(O)=O)C)c1csc(n1)N)=O"                                                                                                             
LP0 InChI            InChI                1.03  "InChI=1S/C10H16BN4O9PS/c1-10(2,8(17)18)23-15-6(5-3-26-9(12)14-5)7(16)13-4-11(19)24-25(20,21)22/h3,19H,4H2,1-2H3,(H2,12,14)(H,13,16)(H,17,18)(H2,20,21,22)/b15-6-" 
LP0 InChIKey         InChI                1.03  NLJWLRKAKQZXHE-UUASQNMZSA-N                                                                                                                                        
LP0 SMILES_CANONICAL CACTVS               3.385 "CC(C)(O\N=C(/C(=O)NCB(O)O[P](O)(O)=O)c1csc(N)n1)C(O)=O"                                                                                                           
LP0 SMILES           CACTVS               3.385 "CC(C)(ON=C(C(=O)NCB(O)O[P](O)(O)=O)c1csc(N)n1)C(O)=O"                                                                                                             
LP0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(CNC(=O)/C(=N\OC(C)(C)C(=O)O)/c1csc(n1)N)(O)OP(=O)(O)O"                                                                                                          
LP0 SMILES           "OpenEye OEToolkits" 2.0.7 "B(CNC(=O)C(=NOC(C)(C)C(=O)O)c1csc(n1)N)(O)OP(=O)(O)O"                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LP0 "SYSTEMATIC NAME" ACDLabs              12.01 "(7Z)-7-(2-amino-1,3-thiazol-4-yl)-1,1,3-trihydroxy-10,10-dimethyl-1,6-dioxo-2,9-dioxa-5,8-diaza-1lambda~5~-phospha-3-boraundec-7-en-11-oic acid"     
LP0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(~{Z})-[1-(2-azanyl-1,3-thiazol-4-yl)-2-oxidanylidene-2-[[oxidanyl(phosphonooxy)boranyl]methylamino]ethylidene]amino]oxy-2-methyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LP0 "Create component" 2019-07-25 RCSB 
LP0 "Initial release"  2020-10-21 RCSB 
LP0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            LP0 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
