data_VB0
# 
_chem_comp.id                                    VB0 
_chem_comp.name                                  "5-(2-cyclopropylethynyl)-6-(2-fluorophenyl)pyrimidine-2,4-diamine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H13 F N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-01 
_chem_comp.pdbx_modified_date                    2024-03-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        268.289 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VB0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8COW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VB0 C10 C1  C 0 1 Y N N N N N 21.577 5.867  7.094  -1.158 1.063  -1.119 C10 VB0 1  
VB0 C13 C2  C 0 1 N N N N N N 23.377 9.241  11.336 -3.145 -2.386 0.285  C13 VB0 2  
VB0 C15 C3  C 0 1 N N N N N N 22.855 10.625 10.985 -4.204 -1.640 -0.527 C15 VB0 3  
VB0 C01 C4  C 0 1 Y N N N N N 18.919 3.970  10.213 3.264  -0.260 -0.229 C01 VB0 4  
VB0 C02 C5  C 0 1 Y N N N N N 20.204 5.734  9.207  1.013  0.259  -0.195 C02 VB0 5  
VB0 C03 C6  C 0 1 Y N N N N N 20.688 6.067  10.493 0.715  -1.105 -0.025 C03 VB0 6  
VB0 C04 C7  C 0 1 Y N N N N N 20.197 5.298  11.533 1.787  -2.016 0.036  C04 VB0 7  
VB0 C05 C8  C 0 1 Y N N N N N 20.603 6.442  7.900  -0.072 1.263  -0.266 C05 VB0 8  
VB0 C06 C9  C 0 1 Y N N N N N 19.975 7.617  7.522  -0.014 2.417  0.520  C06 VB0 9  
VB0 C07 C10 C 0 1 Y N N N N N 20.350 8.249  6.330  -1.031 3.350  0.447  C07 VB0 10 
VB0 C08 C11 C 0 1 Y N N N N N 21.343 7.682  5.528  -2.103 3.143  -0.401 C08 VB0 11 
VB0 C09 C12 C 0 1 Y N N N N N 21.956 6.493  5.911  -2.163 2.006  -1.185 C09 VB0 12 
VB0 C11 C13 C 0 1 N N N N N N 21.650 7.225  10.737 -0.641 -1.555 0.084  C11 VB0 13 
VB0 C12 C14 C 0 1 N N N N N N 22.412 8.096  11.007 -1.752 -1.924 0.173  C12 VB0 14 
VB0 C14 C15 C 0 1 N N N N N N 23.923 9.957  10.111 -4.141 -1.464 0.991  C14 VB0 15 
VB0 F01 F1  F 0 1 N N N N N N 19.006 8.173  8.310  1.034  2.619  1.349  F01 VB0 16 
VB0 N01 N1  N 0 1 Y N N N N N 19.362 4.288  11.434 3.028  -1.555 -0.069 N01 VB0 17 
VB0 N02 N2  N 0 1 Y N N N N N 19.372 4.704  9.188  2.288  0.631  -0.291 N02 VB0 18 
VB0 N03 N3  N 0 1 N N N N N N 20.659 5.617  12.872 1.552  -3.369 0.202  N03 VB0 19 
VB0 N04 N4  N 0 1 N N N N N N 17.980 2.885  10.032 4.574  0.173  -0.327 N04 VB0 20 
VB0 H1  H1  H 0 1 N N N N N N 22.039 4.935  7.385  -1.209 0.173  -1.729 H1  VB0 21 
VB0 H2  H2  H 0 1 N N N N N N 24.030 9.134  12.215 -3.274 -3.461 0.415  H2  VB0 22 
VB0 H3  H3  H 0 1 N N N N N N 23.119 11.489 11.613 -3.870 -0.806 -1.145 H3  VB0 23 
VB0 H4  H4  H 0 1 N N N N N N 21.830 10.747 10.605 -5.031 -2.223 -0.933 H4  VB0 24 
VB0 H5  H5  H 0 1 N N N N N N 19.873 9.171  6.032  -0.988 4.243  1.054  H5  VB0 25 
VB0 H6  H6  H 0 1 N N N N N N 21.636 8.167  4.609  -2.893 3.878  -0.457 H6  VB0 26 
VB0 H7  H7  H 0 1 N N N N N N 22.725 6.057  5.291  -3.004 1.850  -1.846 H7  VB0 27 
VB0 H8  H8  H 0 1 N N N N N N 23.665 9.599  9.103  -4.926 -1.932 1.585  H8  VB0 28 
VB0 H9  H9  H 0 1 N N N N N N 24.954 10.341 10.111 -3.765 -0.515 1.373  H9  VB0 29 
VB0 H10 H10 H 0 1 N N N N N N 20.245 4.985  13.527 0.642  -3.697 0.278  H10 VB0 30 
VB0 H11 H11 H 0 1 N N N N N N 21.655 5.532  12.910 2.296  -3.989 0.242  H11 VB0 31 
VB0 H12 H12 H 0 1 N N N N N N 17.753 2.798  9.062  5.302  -0.466 -0.280 H12 VB0 32 
VB0 H13 H13 H 0 1 N N N N N N 18.390 2.032  10.356 4.765  1.117  -0.444 H13 VB0 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VB0 C08 C09 DOUB Y N 1  
VB0 C08 C07 SING Y N 2  
VB0 C09 C10 SING Y N 3  
VB0 C07 C06 DOUB Y N 4  
VB0 C10 C05 DOUB Y N 5  
VB0 C06 C05 SING Y N 6  
VB0 C06 F01 SING N N 7  
VB0 C05 C02 SING N N 8  
VB0 N02 C02 DOUB Y N 9  
VB0 N02 C01 SING Y N 10 
VB0 C02 C03 SING Y N 11 
VB0 N04 C01 SING N N 12 
VB0 C14 C15 SING N N 13 
VB0 C14 C13 SING N N 14 
VB0 C01 N01 DOUB Y N 15 
VB0 C03 C11 SING N N 16 
VB0 C03 C04 DOUB Y N 17 
VB0 C11 C12 TRIP N N 18 
VB0 C15 C13 SING N N 19 
VB0 C12 C13 SING N N 20 
VB0 N01 C04 SING Y N 21 
VB0 C04 N03 SING N N 22 
VB0 C10 H1  SING N N 23 
VB0 C13 H2  SING N N 24 
VB0 C15 H3  SING N N 25 
VB0 C15 H4  SING N N 26 
VB0 C07 H5  SING N N 27 
VB0 C08 H6  SING N N 28 
VB0 C09 H7  SING N N 29 
VB0 C14 H8  SING N N 30 
VB0 C14 H9  SING N N 31 
VB0 N03 H10 SING N N 32 
VB0 N03 H11 SING N N 33 
VB0 N04 H12 SING N N 34 
VB0 N04 H13 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VB0 InChI            InChI                1.06  "InChI=1S/C15H13FN4/c16-12-4-2-1-3-10(12)13-11(8-7-9-5-6-9)14(17)20-15(18)19-13/h1-4,9H,5-6H2,(H4,17,18,19,20)" 
VB0 InChIKey         InChI                1.06  GKZUWPJVDMAAMZ-UHFFFAOYSA-N                                                                                     
VB0 SMILES_CANONICAL CACTVS               3.385 "Nc1nc(N)c(C#CC2CC2)c(n1)c3ccccc3F"                                                                             
VB0 SMILES           CACTVS               3.385 "Nc1nc(N)c(C#CC2CC2)c(n1)c3ccccc3F"                                                                             
VB0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2c(c(nc(n2)N)N)C#CC3CC3)F"                                                                         
VB0 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2c(c(nc(n2)N)N)C#CC3CC3)F"                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           VB0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "5-(2-cyclopropylethynyl)-6-(2-fluorophenyl)pyrimidine-2,4-diamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VB0 "Create component" 2023-03-01 PDBE 
VB0 "Initial release"  2024-03-13 RCSB 
# 
