data_VM0
# 
_chem_comp.id                                    VM0 
_chem_comp.name                                  "(1S,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H36 Cl N3 O8 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        594.141 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VM0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E61 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VM0 C31  C1  C  0 1 Y N N N N N -22.059 0.001  -4.282 9.533  0.542  -1.948 C31  VM0 1  
VM0 C32  C2  C  0 1 Y N N N N N -21.448 0.189  -3.046 9.262  0.805  -0.616 C32  VM0 2  
VM0 C34  C3  C  0 1 Y N N N N N -22.189 0.061  -1.885 8.226  0.150  0.022  C34  VM0 3  
VM0 N10  N1  N  0 1 N N N N N N -18.765 -5.275 4.802  -3.647 0.010  0.657  N10  VM0 4  
VM0 N15  N2  N  0 1 N N N N N N -14.971 -1.917 2.540  -6.877 -3.589 -1.379 N15  VM0 5  
VM0 C11  C4  C  0 1 N N S N N N -17.341 -5.478 4.850  -4.758 0.494  -0.167 C11  VM0 6  
VM0 C13  C5  C  0 1 N N S N N N -16.523 -3.448 3.540  -5.557 -1.844 -0.536 C13  VM0 7  
VM0 C14  C6  C  0 1 N N N N N N -15.984 -2.102 3.650  -6.673 -2.834 -0.286 C14  VM0 8  
VM0 C12  C7  C  0 1 N N N N N N -16.640 -4.115 4.936  -5.949 -0.456 -0.027 C12  VM0 9  
VM0 S2   S1  S  0 1 N Y N N N N -17.783 -5.560 7.554  -6.419 2.563  -0.829 S2   VM0 10 
VM0 C16  C8  C  0 1 N N N N N N -14.906 -3.133 1.772  -5.948 -3.226 -2.457 C16  VM0 11 
VM0 C17  C9  C  0 1 N N N N N N -15.505 -4.209 2.696  -5.392 -1.838 -2.072 C17  VM0 12 
VM0 C19  C10 C  0 1 N N S N N N -17.064 -6.351 6.085  -5.164 1.894  0.296  C19  VM0 13 
VM0 C24  C11 C  0 1 N N N N N N -24.174 -2.087 0.295  4.695  -0.586 -0.265 C24  VM0 14 
VM0 C23  C12 C  0 1 N N N N N N -22.706 -2.151 0.743  3.469  -1.115 0.481  C23  VM0 15 
VM0 C28  C13 C  0 1 Y N N N N N -23.534 -0.261 -1.953 7.457  -0.774 -0.676 C28  VM0 16 
VM0 C29  C14 C  0 1 Y N N N N N -24.147 -0.450 -3.187 7.733  -1.036 -2.012 C29  VM0 17 
VM0 C30  C15 C  0 1 Y N N N N N -23.407 -0.318 -4.351 8.767  -0.373 -2.645 C30  VM0 18 
VM0 C25  C16 C  0 1 N N N N N N -25.084 -2.305 1.506  4.435  -0.634 -1.772 C25  VM0 19 
VM0 C26  C17 C  0 1 N N N N N N -24.488 -3.161 -0.744 4.966  0.859  0.159  C26  VM0 20 
VM0 O18  O1  O  0 1 N N N N N N -16.266 -1.299 4.479  -7.295 -2.933 0.751  O18  VM0 21 
VM0 C02  C18 C  0 1 N N N N N N -21.432 -3.812 1.831  1.147  -0.626 0.742  C02  VM0 22 
VM0 C04  C19 C  0 1 N N S N N N -21.028 -5.419 3.671  -1.233 -0.268 1.119  C04  VM0 23 
VM0 C05  C20 C  0 1 N N N N N N -21.712 -6.667 4.223  -1.314 0.369  2.508  C05  VM0 24 
VM0 C06  C21 C  0 1 N N N N N N -23.237 -6.592 4.173  -0.230 -0.230 3.407  C06  VM0 25 
VM0 C07  C22 C  0 1 N N N N N N -23.893 -7.619 5.094  -0.229 0.493  4.755  C07  VM0 26 
VM0 C08  C23 C  0 1 N N N N N N -23.765 -5.192 4.491  -0.514 -1.717 3.626  C08  VM0 27 
VM0 C09  C24 C  0 1 N N N N N N -19.527 -5.643 3.627  -2.375 0.231  0.271  C09  VM0 28 
VM0 N03  N3  N  0 1 N N N N N N -21.512 -5.156 2.336  0.038  0.096  0.488  N03  VM0 29 
VM0 O01  O2  O  0 1 N N N N N N -20.711 -3.034 2.373  1.093  -1.579 1.494  O01  VM0 30 
VM0 O20  O3  O  0 1 N N N N N N -15.676 -6.497 6.216  -4.018 2.748  0.294  O20  VM0 31 
VM0 O21  O4  O  0 1 N N N N N N -18.998 -6.107 2.675  -2.149 0.830  -0.759 O21  VM0 32 
VM0 O22  O5  O  0 1 N N N N N N -22.210 -3.460 0.722  2.316  -0.292 0.162  O22  VM0 33 
VM0 S27  S2  S  0 1 N N N N N N -24.501 -0.434 -0.427 6.136  -1.613 0.133  S27  VM0 34 
VM0 CL33 CL1 CL 0 0 N N N N N N -19.714 0.602  -2.938 10.223 1.960  0.253  CL33 VM0 35 
VM0 H1   H1  H  0 1 N N N N N N -21.482 0.104  -5.189 10.344 1.055  -2.444 H1   VM0 36 
VM0 H2   H2  H  0 1 N N N N N N -21.718 0.212  -0.925 8.014  0.355  1.061  H2   VM0 37 
VM0 H3   H3  H  0 1 N N N N N N -19.234 -4.875 5.590  -3.828 -0.470 1.480  H3   VM0 38 
VM0 H4   H4  H  0 1 N N N N N N -14.437 -1.089 2.369  -7.548 -4.286 -1.447 H4   VM0 39 
VM0 H5   H5  H  0 1 N N N N N N -16.996 -6.006 3.949  -4.445 0.533  -1.211 H5   VM0 40 
VM0 H6   H6  H  0 1 N N N N N N -17.504 -3.446 3.043  -4.636 -2.179 -0.059 H6   VM0 41 
VM0 H7   H7  H  0 1 N N N N N N -15.631 -4.257 5.350  -6.239 -0.522 1.022  H7   VM0 42 
VM0 H8   H8  H  0 1 N N N N N N -17.219 -3.456 5.600  -6.787 -0.076 -0.612 H8   VM0 43 
VM0 H10  H10 H  0 1 N N N N N N -15.497 -3.041 0.849  -5.138 -3.954 -2.517 H10  VM0 44 
VM0 H11  H11 H  0 1 N N N N N N -13.864 -3.376 1.517  -6.477 -3.170 -3.408 H11  VM0 45 
VM0 H12  H12 H  0 1 N N N N N N -15.997 -4.999 2.109  -5.985 -1.041 -2.521 H12  VM0 46 
VM0 H13  H13 H  0 1 N N N N N N -14.726 -4.656 3.332  -4.343 -1.746 -2.353 H13  VM0 47 
VM0 H14  H14 H  0 1 N N N N N N -17.567 -7.323 5.973  -5.573 1.839  1.305  H14  VM0 48 
VM0 H15  H15 H  0 1 N N N N N N -22.100 -1.530 0.066  3.276  -2.144 0.179  H15  VM0 49 
VM0 H16  H16 H  0 1 N N N N N N -22.630 -1.758 1.768  3.654  -1.080 1.555  H16  VM0 50 
VM0 H17  H17 H  0 1 N N N N N N -25.197 -0.699 -3.238 7.138  -1.754 -2.557 H17  VM0 51 
VM0 H18  H18 H  0 1 N N N N N N -23.879 -0.463 -5.311 8.981  -0.576 -3.684 H18  VM0 52 
VM0 H19  H19 H  0 1 N N N N N N -24.872 -1.539 2.267  3.618  0.043  -2.022 H19  VM0 53 
VM0 H20  H20 H  0 1 N N N N N N -26.136 -2.229 1.193  5.335  -0.330 -2.306 H20  VM0 54 
VM0 H21  H21 H  0 1 N N N N N N -24.898 -3.303 1.929  4.167  -1.650 -2.062 H21  VM0 55 
VM0 H22  H22 H  0 1 N N N N N N -24.293 -4.155 -0.315 5.241  0.882  1.214  H22  VM0 56 
VM0 H23  H23 H  0 1 N N N N N N -25.546 -3.089 -1.037 5.782  1.266  -0.438 H23  VM0 57 
VM0 H24  H24 H  0 1 N N N N N N -23.851 -3.012 -1.629 4.068  1.458  0.004  H24  VM0 58 
VM0 H25  H25 H  0 1 N N N N N N -21.248 -4.566 4.330  -1.296 -1.352 1.212  H25  VM0 59 
VM0 H26  H26 H  0 1 N N N N N N -21.385 -7.535 3.631  -1.163 1.445  2.424  H26  VM0 60 
VM0 H27  H27 H  0 1 N N N N N N -21.403 -6.800 5.270  -2.295 0.173  2.941  H27  VM0 61 
VM0 H28  H28 H  0 1 N N N N N N -23.543 -6.831 3.144  0.743  -0.112 2.931  H28  VM0 62 
VM0 H29  H29 H  0 1 N N N N N N -24.987 -7.528 5.025  -1.202 0.375  5.231  H29  VM0 63 
VM0 H30  H30 H  0 1 N N N N N N -23.589 -8.631 4.789  0.543  0.067  5.396  H30  VM0 64 
VM0 H31  H31 H  0 1 N N N N N N -23.575 -7.437 6.131  -0.027 1.553  4.599  H31  VM0 65 
VM0 H32  H32 H  0 1 N N N N N N -24.864 -5.194 4.441  -1.487 -1.835 4.102  H32  VM0 66 
VM0 H33  H33 H  0 1 N N N N N N -23.444 -4.900 5.502  -0.514 -2.232 2.665  H33  VM0 67 
VM0 H34  H34 H  0 1 N N N N N N -23.366 -4.475 3.759  0.258  -2.144 4.266  H34  VM0 68 
VM0 H35  H35 H  0 1 N N N N N N -21.894 -5.891 1.776  0.082  0.857  -0.112 H35  VM0 69 
VM0 H36  H36 H  0 1 N N N N N N -15.484 -7.035 6.975  -3.305 2.451  0.875  H36  VM0 70 
VM0 O1   O6  O  0 1 N Y N N N N -17.108 -6.550 8.905  -6.058 2.317  -2.182 O1   VM0 71 
VM0 O2   O7  O  0 1 N Y N N N N ?       ?      ?      -7.641 1.685  -0.601 O2   VM0 72 
VM0 O3   O8  O  0 1 N Y N N N N ?       ?      ?      -6.832 3.855  -0.405 O3   VM0 73 
VM0 H9   H9  H  0 1 N Y N N N N ?       ?      ?      -8.405 1.926  -1.142 H9   VM0 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VM0 C30 C31  DOUB Y N 1  
VM0 C30 C29  SING Y N 2  
VM0 C31 C32  SING Y N 3  
VM0 C29 C28  DOUB Y N 4  
VM0 C32 CL33 SING N N 5  
VM0 C32 C34  DOUB Y N 6  
VM0 C28 C34  SING Y N 7  
VM0 C28 S27  SING N N 8  
VM0 C26 C24  SING N N 9  
VM0 S27 C24  SING N N 10 
VM0 C24 C23  SING N N 11 
VM0 C24 C25  SING N N 12 
VM0 O22 C23  SING N N 13 
VM0 O22 C02  SING N N 14 
VM0 C16 N15  SING N N 15 
VM0 C16 C17  SING N N 16 
VM0 C02 N03  SING N N 17 
VM0 C02 O01  DOUB N N 18 
VM0 N03 C04  SING N N 19 
VM0 N15 C14  SING N N 20 
VM0 O21 C09  DOUB N N 21 
VM0 C17 C13  SING N N 22 
VM0 C13 C14  SING N N 23 
VM0 C13 C12  SING N N 24 
VM0 C09 C04  SING N N 25 
VM0 C09 N10  SING N N 26 
VM0 C14 O18  DOUB N N 27 
VM0 C04 C05  SING N N 28 
VM0 C06 C05  SING N N 29 
VM0 C06 C08  SING N N 30 
VM0 C06 C07  SING N N 31 
VM0 N10 C11  SING N N 32 
VM0 C11 C12  SING N N 33 
VM0 C11 C19  SING N N 34 
VM0 C19 O20  SING N N 35 
VM0 C19 S2   SING N N 36 
VM0 C31 H1   SING N N 37 
VM0 C34 H2   SING N N 38 
VM0 N10 H3   SING N N 39 
VM0 N15 H4   SING N N 40 
VM0 C11 H5   SING N N 41 
VM0 C13 H6   SING N N 42 
VM0 C12 H7   SING N N 43 
VM0 C12 H8   SING N N 44 
VM0 C16 H10  SING N N 45 
VM0 C16 H11  SING N N 46 
VM0 C17 H12  SING N N 47 
VM0 C17 H13  SING N N 48 
VM0 C19 H14  SING N N 49 
VM0 C23 H15  SING N N 50 
VM0 C23 H16  SING N N 51 
VM0 C29 H17  SING N N 52 
VM0 C30 H18  SING N N 53 
VM0 C25 H19  SING N N 54 
VM0 C25 H20  SING N N 55 
VM0 C25 H21  SING N N 56 
VM0 C26 H22  SING N N 57 
VM0 C26 H23  SING N N 58 
VM0 C26 H24  SING N N 59 
VM0 C04 H25  SING N N 60 
VM0 C05 H26  SING N N 61 
VM0 C05 H27  SING N N 62 
VM0 C06 H28  SING N N 63 
VM0 C07 H29  SING N N 64 
VM0 C07 H30  SING N N 65 
VM0 C07 H31  SING N N 66 
VM0 C08 H32  SING N N 67 
VM0 C08 H33  SING N N 68 
VM0 C08 H34  SING N N 69 
VM0 N03 H35  SING N N 70 
VM0 O20 H36  SING N N 71 
VM0 S2  O1   DOUB N N 72 
VM0 S2  O2   SING N N 73 
VM0 S2  O3   DOUB N N 74 
VM0 O2  H9   SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VM0 SMILES           ACDLabs              12.01 "CC(C)CC(NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"                                                                                                                                                                            
VM0 InChI            InChI                1.06  "InChI=1S/C24H36ClN3O8S2/c1-14(2)10-18(28-23(32)36-13-24(3,4)37-17-7-5-6-16(25)12-17)21(30)27-19(22(31)38(33,34)35)11-15-8-9-26-20(15)29/h5-7,12,14-15,18-19,22,31H,8-11,13H2,1-4H3,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t15-,18-,19-,22-/m0/s1" 
VM0 InChIKey         InChI                1.06  MOYGJNHMYWCTOO-BCSOYYNPSA-N                                                                                                                                                                                                                         
VM0 SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O"                                                                                                                                                       
VM0 SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"                                                                                                                                                              
VM0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl"                                                                                                                                                        
VM0 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl"                                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VM0 "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"                                           
VM0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-2-[[2-(3-chlorophenyl)sulfanyl-2-methyl-propoxy]carbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VM0 "Create component" 2022-08-30 RCSB 
VM0 "Initial release"  2022-09-07 RCSB 
VM0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VM0 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
