data_VM1
# 
_chem_comp.id                                    VM1 
_chem_comp.name                                  "5-(2-thienyl)nicotinic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H7 N O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "5-thiophen-2-ylpyridine-3-carboxylic acid; 5-(thien-2-yl)nicotinic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-18 
_chem_comp.pdbx_modified_date                    2020-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        205.233 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VM1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3JS2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VM1 O1A  O1A  O 0 1 N N N 20.769 -25.323 57.236 2.891  -2.055 0.002  O1A  VM1 1  
VM1 C1B  C1B  C 0 1 N N N 20.185 -26.348 56.821 3.131  -0.864 0.001  C1B  VM1 2  
VM1 O1C  O1C  O 0 1 N N N 20.361 -27.496 57.284 4.408  -0.435 -0.005 O1C  VM1 3  
VM1 S1D  S1D  S 0 1 Y N N 17.175 -23.431 51.872 -2.326 -1.413 0.001  S1D  VM1 4  
VM1 C1E  C1E  C 0 1 Y N N 17.396 -21.742 51.801 -3.993 -0.855 0.000  C1E  VM1 5  
VM1 C1F  C1F  C 0 1 Y N N 18.019 -21.394 52.928 -4.022 0.481  -0.001 C1F  VM1 6  
VM1 C1G  C1G  C 0 1 Y N N 19.191 -26.180 55.669 2.023  0.113  -0.001 C1G  VM1 7  
VM1 C1H  C1H  C 0 1 Y N N 19.014 -24.932 55.085 0.695  -0.321 -0.000 C1H  VM1 8  
VM1 C1I  C1I  C 0 1 Y N N 18.110 -24.820 54.033 -0.315 0.646  -0.001 C1I  VM1 9  
VM1 C1J  C1J  C 0 1 Y N N 17.927 -23.597 53.401 -1.738 0.244  -0.001 C1J  VM1 10 
VM1 C1K  C1K  C 0 1 Y N N 18.306 -22.378 53.785 -2.786 1.092  -0.001 C1K  VM1 11 
VM1 C1L  C1L  C 0 1 Y N N 18.466 -27.266 55.191 2.288  1.485  0.004  C1L  VM1 12 
VM1 N1M  N1M  N 0 1 Y N N 17.615 -27.120 54.190 1.306  2.362  0.003  N1M  VM1 13 
VM1 C1N  C1N  C 0 1 Y N N 17.420 -25.950 53.607 0.041  1.996  -0.002 C1N  VM1 14 
VM1 HO1C HO1C H 0 0 N N N 20.998 -27.460 57.988 5.099  -1.112 -0.007 HO1C VM1 15 
VM1 H1E  H1E  H 0 1 N N N 17.092 -21.083 51.001 -4.863 -1.496 0.001  H1E  VM1 16 
VM1 H1F  H1F  H 0 1 N N N 18.279 -20.367 53.138 -4.946 1.040  -0.001 H1F  VM1 17 
VM1 H1H  H1H  H 0 1 N N N 19.563 -24.072 55.438 0.454  -1.374 0.000  H1H  VM1 18 
VM1 H1K  H1K  H 0 1 N N N 18.810 -22.198 54.723 -2.666 2.165  -0.002 H1K  VM1 19 
VM1 H1L  H1L  H 0 1 N N N 18.599 -28.238 55.642 3.312  1.830  0.008  H1L  VM1 20 
VM1 H1N  H1N  H 0 1 N N N 16.717 -25.871 52.791 -0.732 2.750  -0.004 H1N  VM1 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VM1 C1B O1A  DOUB N N 1  
VM1 C1G C1B  SING N N 2  
VM1 C1B O1C  SING N N 3  
VM1 O1C HO1C SING N N 4  
VM1 C1E S1D  SING Y N 5  
VM1 S1D C1J  SING Y N 6  
VM1 C1E C1F  DOUB Y N 7  
VM1 C1E H1E  SING N N 8  
VM1 C1F C1K  SING Y N 9  
VM1 C1F H1F  SING N N 10 
VM1 C1H C1G  DOUB Y N 11 
VM1 C1L C1G  SING Y N 12 
VM1 C1I C1H  SING Y N 13 
VM1 C1H H1H  SING N N 14 
VM1 C1J C1I  SING Y N 15 
VM1 C1N C1I  DOUB Y N 16 
VM1 C1J C1K  DOUB Y N 17 
VM1 C1K H1K  SING N N 18 
VM1 N1M C1L  DOUB Y N 19 
VM1 C1L H1L  SING N N 20 
VM1 C1N N1M  SING Y N 21 
VM1 C1N H1N  SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VM1 SMILES           ACDLabs              11.02 "O=C(O)c2cncc(c1sccc1)c2"                                                  
VM1 SMILES_CANONICAL CACTVS               3.352 "OC(=O)c1cncc(c1)c2sccc2"                                                  
VM1 SMILES           CACTVS               3.352 "OC(=O)c1cncc(c1)c2sccc2"                                                  
VM1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(sc1)c2cc(cnc2)C(=O)O"                                                
VM1 SMILES           "OpenEye OEToolkits" 1.7.0 "c1cc(sc1)c2cc(cnc2)C(=O)O"                                                
VM1 InChI            InChI                1.03  "InChI=1S/C10H7NO2S/c12-10(13)8-4-7(5-11-6-8)9-2-1-3-14-9/h1-6H,(H,12,13)" 
VM1 InChIKey         InChI                1.03  DFWKRZGYBOVSKW-UHFFFAOYSA-N                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VM1 "SYSTEMATIC NAME" ACDLabs              11.02 "5-(thiophen-2-yl)pyridine-3-carboxylic acid" 
VM1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "5-thiophen-2-ylpyridine-3-carboxylic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VM1 "Create component"     2009-09-18 RCSB 
VM1 "Modify aromatic_flag" 2011-06-04 RCSB 
VM1 "Modify descriptor"    2011-06-04 RCSB 
VM1 "Modify synonyms"      2020-05-26 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 VM1 "5-thiophen-2-ylpyridine-3-carboxylic acid" ? ? 
2 VM1 "5-(thien-2-yl)nicotinic acid"              ? ? 
# 
