data_2W2
#

_chem_comp.id                                   2W2
_chem_comp.name                                 "N-[(1S)-4-carbamimidamido-1-carboxybutyl]-D-glutamic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H20 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Nopaline
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-02-28
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       304.300
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2W2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4POX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2W2  OXT  OXT  O  0  1  N  N  N  16.478  -8.039  -1.830   1.790  -3.057   2.131  OXT  2W2   1  
2W2  CAQ  CAQ  C  0  1  N  N  N  18.852  -8.192   2.160   0.405   3.428   0.693  CAQ  2W2   2  
2W2  CAK  CAK  C  0  1  N  N  N  20.223  -7.725   1.757   0.821   1.980   0.758  CAK  2W2   3  
2W2  CAM  CAM  C  0  1  N  N  N  20.697  -7.850   0.340   1.906   1.714  -0.287  CAM  2W2   4  
2W2  CAU  CAU  C  0  1  N  N  R  20.208  -6.842  -0.680   2.378   0.263  -0.175  CAU  2W2   5  
2W2  OAC  OAC  O  0  1  N  N  N  17.857  -8.102   1.389   0.924   4.170  -0.106  OAC  2W2   6  
2W2  OAF  OAF  O  0  1  N  N  N  18.687  -8.666   3.317  -0.541   3.892   1.524  OAF  2W2   7  
2W2  CAS  CAS  C  0  1  N  N  N  20.438  -5.436  -0.229   3.547   0.042  -1.099  CAS  2W2   8  
2W2  OAH  OAH  O  0  1  N  N  N  19.497  -4.784   0.299   4.795   0.301  -0.676  OAH  2W2   9  
2W2  OAE  OAE  O  0  1  N  N  N  21.578  -4.893  -0.375   3.362  -0.368  -2.220  OAE  2W2  10  
2W2  N    N    N  0  1  N  N  N  18.822  -7.139  -1.051   1.281  -0.639  -0.550  N    2W2  11  
2W2  CA   CA   C  0  1  N  N  S  18.056  -6.241  -1.957   0.789  -1.383   0.618  CA   2W2  12  
2W2  C    C    C  0  1  N  N  N  16.686  -6.865  -2.222   1.704  -2.548   0.892  C    2W2  13  
2W2  O    O    O  0  1  N  N  N  15.798  -6.211  -2.826   2.361  -3.025  -0.003  O    2W2  14  
2W2  CB   CB   C  0  1  N  N  N  18.728  -5.847  -3.266  -0.623  -1.899   0.336  CB   2W2  15  
2W2  CG   CG   C  0  1  N  N  N  19.430  -6.943  -4.008  -1.578  -0.713   0.180  CG   2W2  16  
2W2  CD   CD   C  0  1  N  N  N  19.387  -6.973  -5.496  -2.991  -1.229  -0.102  CD   2W2  17  
2W2  NE   NE   N  0  1  N  N  N  20.139  -8.086  -6.043  -3.905  -0.094  -0.251  NE   2W2  18  
2W2  CZ   CZ   C  0  1  N  N  N  20.948  -7.968  -7.240  -5.237  -0.313  -0.510  CZ   2W2  19  
2W2  NH2  NH2  N  0  1  N  N  N  21.601  -9.023  -7.646  -6.094   0.752  -0.650  NH2  2W2  20  
2W2  NH1  NH1  N  0  1  N  N  N  21.033  -6.867  -7.916  -5.686  -1.531  -0.624  NH1  2W2  21  
2W2  H1   H1   H  0  1  N  N  N  15.595  -8.300  -2.064   2.390  -3.804   2.259  H1   2W2  22  
2W2  H2   H2   H  0  1  N  N  N  20.939  -8.285   2.377   1.211   1.758   1.751  H2   2W2  23  
2W2  H3   H3   H  0  1  N  N  N  20.276  -6.656   2.011  -0.042   1.345   0.555  H3   2W2  24  
2W2  H4   H4   H  0  1  N  N  N  20.394  -8.845  -0.017   1.501   1.889  -1.284  H4   2W2  25  
2W2  H5   H5   H  0  1  N  N  N  21.795  -7.786   0.359   2.748   2.385  -0.115  H5   2W2  26  
2W2  H6   H6   H  0  1  N  N  N  20.821  -6.989  -1.581   2.682   0.059   0.851  H6   2W2  27  
2W2  H7   H7   H  0  1  N  N  N  17.774  -8.898   3.437  -0.774   4.827   1.446  H7   2W2  28  
2W2  H8   H8   H  0  1  N  N  N  19.803  -3.914   0.528   5.513   0.144  -1.305  H8   2W2  29  
2W2  H9   H9   H  0  1  N  N  N  18.304  -7.188  -0.197   1.565  -1.267  -1.286  H9   2W2  30  
2W2  H11  H11  H  0  1  N  N  N  17.873  -5.307  -1.405   0.769  -0.725   1.486  H11  2W2  31  
2W2  H12  H12  H  0  1  N  N  N  19.470  -5.067  -3.040  -0.619  -2.485  -0.583  H12  2W2  32  
2W2  H13  H13  H  0  1  N  N  N  17.953  -5.436  -3.930  -0.954  -2.525   1.164  H13  2W2  33  
2W2  H14  H14  H  0  1  N  N  N  18.999  -7.892  -3.657  -1.582  -0.127   1.099  H14  2W2  34  
2W2  H15  H15  H  0  1  N  N  N  20.491  -6.894  -3.721  -1.248  -0.087  -0.649  H15  2W2  35  
2W2  H16  H16  H  0  1  N  N  N  19.812  -6.035  -5.882  -2.987  -1.815  -1.021  H16  2W2  36  
2W2  H17  H17  H  0  1  N  N  N  18.339  -7.061  -5.819  -3.321  -1.855   0.727  H17  2W2  37  
2W2  H18  H18  H  0  1  N  N  N  20.098  -8.969  -5.576  -3.570   0.812  -0.166  H18  2W2  38  
2W2  H19  H19  H  0  1  N  N  N  21.534  -9.880  -7.135  -5.760   1.658  -0.565  H19  2W2  39  
2W2  H20  H20  H  0  1  N  N  N  22.168  -8.974  -8.468  -7.034   0.597  -0.833  H20  2W2  40  
2W2  H21  H21  H  0  1  N  N  N  20.483  -6.136  -7.512  -5.081  -2.283  -0.526  H21  2W2  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2W2  NH1  CZ   DOUB  N  N   1  
2W2  NH2  CZ   SING  N  N   2  
2W2  CZ   NE   SING  N  N   3  
2W2  NE   CD   SING  N  N   4  
2W2  CD   CG   SING  N  N   5  
2W2  CG   CB   SING  N  N   6  
2W2  CB   CA   SING  N  N   7  
2W2  O    C    DOUB  N  N   8  
2W2  C    CA   SING  N  N   9  
2W2  C    OXT  SING  N  N  10  
2W2  CA   N    SING  N  N  11  
2W2  N    CAU  SING  N  N  12  
2W2  CAU  CAS  SING  N  N  13  
2W2  CAU  CAM  SING  N  N  14  
2W2  OAE  CAS  DOUB  N  N  15  
2W2  CAS  OAH  SING  N  N  16  
2W2  CAM  CAK  SING  N  N  17  
2W2  OAC  CAQ  DOUB  N  N  18  
2W2  CAK  CAQ  SING  N  N  19  
2W2  CAQ  OAF  SING  N  N  20  
2W2  OXT  H1   SING  N  N  21  
2W2  CAK  H2   SING  N  N  22  
2W2  CAK  H3   SING  N  N  23  
2W2  CAM  H4   SING  N  N  24  
2W2  CAM  H5   SING  N  N  25  
2W2  CAU  H6   SING  N  N  26  
2W2  OAF  H7   SING  N  N  27  
2W2  OAH  H8   SING  N  N  28  
2W2  N    H9   SING  N  N  29  
2W2  CA   H11  SING  N  N  30  
2W2  CB   H12  SING  N  N  31  
2W2  CB   H13  SING  N  N  32  
2W2  CG   H14  SING  N  N  33  
2W2  CG   H15  SING  N  N  34  
2W2  CD   H16  SING  N  N  35  
2W2  CD   H17  SING  N  N  36  
2W2  NE   H18  SING  N  N  37  
2W2  NH2  H19  SING  N  N  38  
2W2  NH2  H20  SING  N  N  39  
2W2  NH1  H21  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2W2  SMILES            ACDLabs               12.01  "O=C(O)C(NC(C(=O)O)CCC(=O)O)CCCNC(=[N@H])N"  
2W2  InChI             InChI                 1.03   "InChI=1S/C11H20N4O6/c12-11(13)14-5-1-2-6(9(18)19)15-7(10(20)21)3-4-8(16)17/h6-7,15H,1-5H2,(H,16,17)(H,18,19)(H,20,21)(H4,12,13,14)/t6-,7+/m0/s1"  
2W2  InChIKey          InChI                 1.03   LMKYZBGVKHTLTN-NKWVEPMBSA-N  
2W2  SMILES_CANONICAL  CACTVS                3.385  "NC(=N)NCCC[C@H](N[C@H](CCC(O)=O)C(O)=O)C(O)=O"  
2W2  SMILES            CACTVS                3.385  "NC(=N)NCCC[CH](N[CH](CCC(O)=O)C(O)=O)C(O)=O"  
2W2  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "[H]/N=C(/N)\NCCC[C@@H](C(=O)O)N[C@H](CCC(=O)O)C(=O)O"  
2W2  SMILES            "OpenEye OEToolkits"  1.7.6  "C(CC(C(=O)O)NC(CCC(=O)O)C(=O)O)CNC(=N)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2W2  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(1S)-4-carbamimidamido-1-carboxybutyl]-D-glutamic acid"  
2W2  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R)-2-[[(2S)-5-carbamimidamido-1-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]pentanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2W2  "Create component"  2014-02-28  RCSB  
2W2  "Modify synonyms"   2014-03-04  RCSB  
2W2  "Initial release"   2014-10-22  RCSB  
2W2  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2W2
_pdbx_chem_comp_synonyms.name        Nopaline
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
