data_GL2
#

_chem_comp.id                                   GL2
_chem_comp.name                                 "(5S,7R,8S,9S,10R)-3-amino-8,9,10-trihydroxy-7-(hydroxymethyl)-6-oxa-1,3-diazaspiro[4.5]decane-2,4-dione"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H13 N3 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "3-AMINO-8,9,10-TRIHYDROXY-7-HYDROXYMETHYL-6-OXA-1,3-DIAZA-SPIRO[4.5]DECANE-2,4-DIONE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2000-09-15
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       263.205
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GL2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1FTQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GL2
_pdbx_chem_comp_synonyms.name        "3-AMINO-8,9,10-TRIHYDROXY-7-HYDROXYMETHYL-6-OXA-1,3-DIAZA-SPIRO[4.5]DECANE-2,4-DIONE"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GL2  C1    C1    C  0  1  N  N  S  33.938  22.732  27.755  -0.087   0.602   0.470  C1    GL2   1  
GL2  C2    C2    C  0  1  N  N  R  33.912  23.063  26.239  -1.478   0.713  -0.145  C2    GL2   2  
GL2  O2    O2    O  0  1  N  N  N  33.967  24.451  26.008  -2.459   0.303   0.809  O2    GL2   3  
GL2  C3    C3    C  0  1  N  N  S  32.633  22.475  25.596  -1.555  -0.193  -1.380  C3    GL2   4  
GL2  O3    O3    O  0  1  N  N  N  32.772  22.643  24.197  -2.790   0.024  -2.064  O3    GL2   5  
GL2  C4    C4    C  0  1  N  N  S  32.497  20.967  25.941  -0.385   0.148  -2.310  C4    GL2   6  
GL2  O4    O4    O  0  1  N  N  N  31.331  20.531  25.312  -0.355  -0.773  -3.402  O4    GL2   7  
GL2  C5    C5    C  0  1  N  N  R  32.393  20.812  27.475   0.923   0.053  -1.523  C5    GL2   8  
GL2  C6    C6    C  0  1  N  N  N  32.195  19.422  27.943   2.099   0.348  -2.456  C6    GL2   9  
GL2  O6    O6    O  0  1  N  N  N  33.227  18.606  27.385   3.323   0.253  -1.724  O6    GL2  10  
GL2  O5    O5    O  0  1  N  N  N  33.611  21.310  28.053   0.915   0.999  -0.455  O5    GL2  11  
GL2  N2    N2    N  0  1  N  N  N  35.270  23.036  28.206  -0.007   1.409   1.695  N2    GL2  12  
GL2  C8    C8    C  0  1  N  N  N  35.165  23.941  29.180   0.250   0.552   2.701  C8    GL2  13  
GL2  O8    O8    O  0  1  N  N  N  36.136  24.399  29.776   0.380   0.891   3.861  O8    GL2  14  
GL2  N1    N1    N  0  1  N  N  N  33.920  24.346  29.476   0.348  -0.714   2.279  N1    GL2  15  
GL2  C7    C7    C  0  1  N  N  N  33.114  23.658  28.666   0.167  -0.809   0.946  C7    GL2  16  
GL2  O7    O7    O  0  1  N  N  N  31.861  23.756  28.657   0.196  -1.817   0.272  O7    GL2  17  
GL2  N3    N3    N  0  1  N  N  N  33.548  25.301  30.432   0.605  -1.777   3.098  N3    GL2  18  
GL2  H2    H2    H  0  1  N  N  N  34.814  22.603  25.773  -1.665   1.745  -0.439  H2    GL2  19  
GL2  HO2   HO2   H  0  1  N  Y  N  33.951  24.653  25.080  -3.320   0.383   0.377  HO2   GL2  20  
GL2  H3    H3    H  0  1  N  N  N  31.720  22.989  25.977  -1.485  -1.236  -1.073  H3    GL2  21  
GL2  HO3   HO3   H  0  1  N  Y  N  31.986  22.282  23.802  -2.788  -0.555  -2.837  HO3   GL2  22  
GL2  H4    H4    H  0  1  N  N  N  33.372  20.367  25.598  -0.507   1.162  -2.693  H4    GL2  23  
GL2  HO4   HO4   H  0  1  N  Y  N  31.247  19.608  25.523   0.397  -0.525  -3.956  HO4   GL2  24  
GL2  H5    H5    H  0  1  N  N  N  31.488  21.382  27.792   1.028  -0.952  -1.115  H5    GL2  25  
GL2  H61   H61   H  0  1  N  N  N  32.143  19.347  29.054   2.106  -0.373  -3.272  H61   GL2  26  
GL2  H62   H62   H  0  1  N  N  N  31.173  19.035  27.717   1.996   1.355  -2.862  H62   GL2  27  
GL2  HO6   HO6   H  0  1  N  Y  N  33.099  17.713  27.685   4.037   0.446  -2.348  HO6   GL2  28  
GL2  HN2   HN2   H  0  1  N  N  N  35.887  23.333  27.450  -0.118   2.370   1.765  HN2   GL2  29  
GL2  HN31  HN31  H  0  0  N  N  N  32.601  25.608  30.656   0.697  -1.408   4.032  HN31  GL2  30  
GL2  HN32  HN32  H  0  0  N  N  N  34.073  26.145  30.205  -0.223  -2.353   3.094  HN32  GL2  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GL2  C1  C2    SING  N  N   1  
GL2  C1  O5    SING  N  N   2  
GL2  C1  N2    SING  N  N   3  
GL2  C1  C7    SING  N  N   4  
GL2  C2  O2    SING  N  N   5  
GL2  C2  C3    SING  N  N   6  
GL2  C2  H2    SING  N  N   7  
GL2  O2  HO2   SING  N  N   8  
GL2  C3  O3    SING  N  N   9  
GL2  C3  C4    SING  N  N  10  
GL2  C3  H3    SING  N  N  11  
GL2  O3  HO3   SING  N  N  12  
GL2  C4  O4    SING  N  N  13  
GL2  C4  C5    SING  N  N  14  
GL2  C4  H4    SING  N  N  15  
GL2  O4  HO4   SING  N  N  16  
GL2  C5  C6    SING  N  N  17  
GL2  C5  O5    SING  N  N  18  
GL2  C5  H5    SING  N  N  19  
GL2  C6  O6    SING  N  N  20  
GL2  C6  H61   SING  N  N  21  
GL2  C6  H62   SING  N  N  22  
GL2  O6  HO6   SING  N  N  23  
GL2  N2  C8    SING  N  N  24  
GL2  N2  HN2   SING  N  N  25  
GL2  C8  O8    DOUB  N  N  26  
GL2  C8  N1    SING  N  N  27  
GL2  N1  C7    SING  N  N  28  
GL2  N1  N3    SING  N  N  29  
GL2  C7  O7    DOUB  N  N  30  
GL2  N3  HN31  SING  N  N  31  
GL2  N3  HN32  SING  N  N  32  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GL2  SMILES            ACDLabs               10.04  "O=C2N(C(=O)NC21OC(C(O)C(O)C1O)CO)N"  
GL2  SMILES_CANONICAL  CACTVS                3.341  "NN1C(=O)N[C@@]2(O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C1=O"  
GL2  SMILES            CACTVS                3.341  "NN1C(=O)N[C]2(O[CH](CO)[CH](O)[CH](O)[CH]2O)C1=O"  
GL2  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@H]([C@@H]([C@H]([C@]2(O1)C(=O)N(C(=O)N2)N)O)O)O)O"  
GL2  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C2(O1)C(=O)N(C(=O)N2)N)O)O)O)O"  
GL2  InChI             InChI                 1.03   "InChI=1S/C8H13N3O7/c9-11-6(16)8(10-7(11)17)5(15)4(14)3(13)2(1-12)18-8/h2-5,12-15H,1,9H2,(H,10,17)/t2-,3-,4+,5-,8+/m1/s1"  
GL2  InChIKey          InChI                 1.03   KLJXQBRQPPSXPZ-WWHASAIZSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GL2  "SYSTEMATIC NAME"  ACDLabs               10.04  "(5S,7R,8S,9S,10R)-3-amino-8,9,10-trihydroxy-7-(hydroxymethyl)-6-oxa-1,3-diazaspiro[4.5]decane-2,4-dione"  
GL2  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(5S,6R,7S,8S,9R)-3-amino-6,7,8-trihydroxy-9-(hydroxymethyl)-10-oxa-1,3-diazaspiro[4.5]decane-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GL2  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GL2  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GL2  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GL2  "Create component"          2000-09-15  RCSB  
GL2  "Modify descriptor"         2011-06-04  RCSB  
GL2  "Other modification"        2020-07-03  RCSB  
GL2  "Modify name"               2020-07-17  RCSB  
GL2  "Modify synonyms"           2020-07-17  RCSB  
GL2  "Modify linking type"       2020-07-17  RCSB  
GL2  "Modify leaving atom flag"  2020-07-17  RCSB  
##
