data_JC2
# 
_chem_comp.id                                    JC2 
_chem_comp.name                                  "(2~{S})-4-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]butanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H31 N4 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-12-13 
_chem_comp.pdbx_modified_date                    2017-06-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        458.446 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JC2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5MNR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JC2 C10 C1  C 0 1 N N N 8.463  42.659 -5.492  6.407   0.336  -1.011 C10 JC2 1  
JC2 C11 C2  C 0 1 N N N 12.152 40.034 -6.824  -1.683  -1.585 -1.461 C11 JC2 2  
JC2 C12 C3  C 0 1 N N N 12.828 40.377 -9.185  -3.755  -0.365 -1.071 C12 JC2 3  
JC2 C13 C4  C 0 1 N N N 13.793 40.339 -11.365 -5.720  0.960  -0.789 C13 JC2 4  
JC2 C14 C5  C 0 1 Y N N 15.311 40.486 -11.504 -7.056  0.898  -0.094 C14 JC2 5  
JC2 C15 C6  C 0 1 Y N N 15.989 39.882 -12.564 -8.150  0.357  -0.745 C15 JC2 6  
JC2 C16 C7  C 0 1 Y N N 17.377 40.011 -12.694 -9.375  0.302  -0.108 C16 JC2 7  
JC2 C19 C8  C 0 1 Y N N 16.053 41.218 -10.585 -7.188  1.378  1.196  C19 JC2 8  
JC2 O01 O1  O 0 1 N N N 12.439 37.413 -6.103  -0.503  -1.969 1.056  O01 JC2 9  
JC2 P01 P1  P 0 1 N N N 11.474 38.572 -5.969  -0.425  -1.042 -0.258 P01 JC2 10 
JC2 N01 N1  N 0 1 N N N 11.231 39.068 -4.394  1.105   -1.174 -0.948 N01 JC2 11 
JC2 C01 C9  C 0 1 N N S 10.085 38.625 -3.611  2.152   -0.853 0.031  C01 JC2 12 
JC2 C02 C10 C 0 1 N N N 10.452 38.642 -2.132  2.664   -2.144 0.672  C02 JC2 13 
JC2 C03 C11 C 0 1 N N N 9.372  38.121 -1.200  3.650   -1.802 1.790  C03 JC2 14 
JC2 C04 C12 C 0 1 N N N 9.654  38.521 0.238   2.907   -1.102 2.929  C04 JC2 15 
JC2 C05 C13 C 0 1 N N N 9.242  36.604 -1.346  4.292   -3.088 2.315  C05 JC2 16 
JC2 C06 C14 C 0 1 N N N 8.867  39.494 -3.860  3.291   -0.152 -0.664 C06 JC2 17 
JC2 N02 N2  N 0 1 N N N 9.159  40.841 -4.061  4.234   0.483  0.060  N02 JC2 18 
JC2 C07 C15 C 0 1 N N S 8.109  41.813 -4.280  5.280   1.255  -0.616 C07 JC2 19 
JC2 O02 O2  O 0 1 N N N 7.568  43.392 -5.966  7.482   0.827  -1.648 O02 JC2 20 
JC2 O03 O3  O 0 1 N N N 9.615  42.597 -5.995  6.346   -0.842 -0.750 O03 JC2 21 
JC2 O04 O4  O 0 1 N N N 7.744  39.072 -3.821  3.359   -0.158 -1.875 O04 JC2 22 
JC2 O05 O5  O 0 1 N N N 10.113 38.212 -6.538  -0.677  0.367  0.117  O05 JC2 23 
JC2 N04 N3  N 0 1 N N N 12.803 39.598 -8.028  -3.014  -1.470 -0.861 N04 JC2 24 
JC2 O06 O6  O 0 1 N N N 13.488 39.671 -10.162 -4.979  -0.259 -0.520 O06 JC2 25 
JC2 C17 C16 C 0 1 Y N N 18.083 40.776 -11.780 -9.508  0.786  1.179  C17 JC2 26 
JC2 C18 C17 C 0 1 Y N N 17.411 41.367 -10.716 -8.413  1.321  1.833  C18 JC2 27 
JC2 O07 O7  O 0 1 N N N 12.372 41.459 -9.286  -3.319  0.537  -1.759 O07 JC2 28 
JC2 C08 C18 C 0 1 N N N 7.873  42.663 -3.041  5.810   2.334  0.331  C08 JC2 29 
JC2 C09 C19 C 0 1 N N N 9.103  43.462 -2.651  4.696   3.339  0.633  C09 JC2 30 
JC2 N03 N4  N 0 1 N N N 8.792  44.514 -1.692  5.205   4.374  1.543  N03 JC2 31 
JC2 H1  H1  H 0 1 N N N 12.879 40.541 -6.172  -1.630  -0.957 -2.351 H1  JC2 32 
JC2 H2  H2  H 0 1 N N N 11.337 40.729 -7.074  -1.497  -2.623 -1.737 H2  JC2 33 
JC2 H3  H3  H 0 1 N N N 13.328 41.336 -11.357 -5.874  1.062  -1.863 H3  JC2 34 
JC2 H4  H4  H 0 1 N N N 13.403 39.759 -12.214 -5.158  1.816  -0.419 H4  JC2 35 
JC2 H5  H5  H 0 1 N N N 15.436 39.308 -13.293 -8.046  -0.021 -1.751 H5  JC2 36 
JC2 H6  H6  H 0 1 N N N 17.895 39.517 -13.503 -10.229 -0.120 -0.617 H6  JC2 37 
JC2 H7  H7  H 0 1 N N N 15.550 41.680 -9.749  -6.333  1.796  1.706  H7  JC2 38 
JC2 H8  H8  H 0 1 N N N 12.000 36.681 -6.521  -0.424  -2.916 0.874  H8  JC2 39 
JC2 H9  H9  H 0 1 N N N 12.044 38.787 -3.884  1.246   -2.092 -1.341 H9  JC2 40 
JC2 H10 H10 H 0 1 N N N 9.835  37.591 -3.892  1.742   -0.202 0.802  H10 JC2 41 
JC2 H11 H11 H 0 1 N N N 11.350 38.021 -1.995  1.824   -2.702 1.086  H11 JC2 42 
JC2 H12 H12 H 0 1 N N N 10.677 39.680 -1.848  3.166   -2.750 -0.083 H12 JC2 43 
JC2 H13 H13 H 0 1 N N N 8.415  38.574 -1.499  4.426   -1.142 1.402  H13 JC2 44 
JC2 H14 H14 H 0 1 N N N 8.858  38.132 0.890   3.620   -0.792 3.693  H14 JC2 45 
JC2 H15 H15 H 0 1 N N N 10.622 38.103 0.552   2.388   -0.226 2.540  H15 JC2 46 
JC2 H16 H16 H 0 1 N N N 9.686  39.618 0.314   2.182   -1.788 3.367  H16 JC2 47 
JC2 H17 H17 H 0 1 N N N 8.458  36.236 -0.668  4.822   -3.587 1.504  H17 JC2 48 
JC2 H18 H18 H 0 1 N N N 8.974  36.357 -2.384  4.995   -2.845 3.112  H18 JC2 49 
JC2 H19 H19 H 0 1 N N N 10.200 36.128 -1.091  3.517   -3.749 2.704  H19 JC2 50 
JC2 H20 H20 H 0 1 N N N 10.112 41.142 -4.054  4.221   0.428  1.028  H20 JC2 51 
JC2 H21 H21 H 0 1 N N N 7.174  41.279 -4.504  4.866   1.726  -1.508 H21 JC2 52 
JC2 H22 H22 H 0 1 N N N 7.906  43.856 -6.723  8.179   0.199  -1.881 H22 JC2 53 
JC2 H23 H23 H 0 1 N N N 13.254 38.705 -8.037  -3.362  -2.191 -0.312 H23 JC2 54 
JC2 H24 H24 H 0 1 N N N 19.148 40.912 -11.893 -10.465 0.743  1.677  H24 JC2 55 
JC2 H25 H25 H 0 1 N N N 17.960 41.946 -9.989  -8.517  1.699  2.839  H25 JC2 56 
JC2 H26 H26 H 0 1 N N N 7.047  43.361 -3.242  6.143   1.870  1.260  H26 JC2 57 
JC2 H27 H27 H 0 1 N N N 7.600  42.002 -2.205  6.647   2.850  -0.138 H27 JC2 58 
JC2 H28 H28 H 0 1 N N N 9.841  42.781 -2.203  4.363   3.802  -0.295 H28 JC2 59 
JC2 H29 H29 H 0 1 N N N 9.529  43.921 -3.555  3.859   2.822  1.103  H29 JC2 60 
JC2 H30 H30 H 0 1 N N N 9.627  45.014 -1.463  4.487   5.050  1.758  H30 JC2 61 
JC2 H31 H31 H 0 1 N N N 8.126  45.143 -2.092  5.579   3.964  2.385  H31 JC2 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JC2 C16 C15 DOUB Y N 1  
JC2 C16 C17 SING Y N 2  
JC2 C15 C14 SING Y N 3  
JC2 C17 C18 DOUB Y N 4  
JC2 C14 C13 SING N N 5  
JC2 C14 C19 DOUB Y N 6  
JC2 C13 O06 SING N N 7  
JC2 C18 C19 SING Y N 8  
JC2 O06 C12 SING N N 9  
JC2 O07 C12 DOUB N N 10 
JC2 C12 N04 SING N N 11 
JC2 N04 C11 SING N N 12 
JC2 C11 P01 SING N N 13 
JC2 O05 P01 DOUB N N 14 
JC2 O01 P01 SING N N 15 
JC2 O03 C10 DOUB N N 16 
JC2 P01 N01 SING N N 17 
JC2 O02 C10 SING N N 18 
JC2 C10 C07 SING N N 19 
JC2 N01 C01 SING N N 20 
JC2 C07 N02 SING N N 21 
JC2 C07 C08 SING N N 22 
JC2 N02 C06 SING N N 23 
JC2 C06 O04 DOUB N N 24 
JC2 C06 C01 SING N N 25 
JC2 C01 C02 SING N N 26 
JC2 C08 C09 SING N N 27 
JC2 C09 N03 SING N N 28 
JC2 C02 C03 SING N N 29 
JC2 C05 C03 SING N N 30 
JC2 C03 C04 SING N N 31 
JC2 C11 H1  SING N N 32 
JC2 C11 H2  SING N N 33 
JC2 C13 H3  SING N N 34 
JC2 C13 H4  SING N N 35 
JC2 C15 H5  SING N N 36 
JC2 C16 H6  SING N N 37 
JC2 C19 H7  SING N N 38 
JC2 O01 H8  SING N N 39 
JC2 N01 H9  SING N N 40 
JC2 C01 H10 SING N N 41 
JC2 C02 H11 SING N N 42 
JC2 C02 H12 SING N N 43 
JC2 C03 H13 SING N N 44 
JC2 C04 H14 SING N N 45 
JC2 C04 H15 SING N N 46 
JC2 C04 H16 SING N N 47 
JC2 C05 H17 SING N N 48 
JC2 C05 H18 SING N N 49 
JC2 C05 H19 SING N N 50 
JC2 N02 H20 SING N N 51 
JC2 C07 H21 SING N N 52 
JC2 O02 H22 SING N N 53 
JC2 N04 H23 SING N N 54 
JC2 C17 H24 SING N N 55 
JC2 C18 H25 SING N N 56 
JC2 C08 H26 SING N N 57 
JC2 C08 H27 SING N N 58 
JC2 C09 H28 SING N N 59 
JC2 C09 H29 SING N N 60 
JC2 N03 H30 SING N N 61 
JC2 N03 H31 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JC2 InChI            InChI                1.03  "InChI=1S/C19H31N4O7P/c1-13(2)10-16(17(24)22-15(8-9-20)18(25)26)23-31(28,29)12-21-19(27)30-11-14-6-4-3-5-7-14/h3-7,13,15-16H,8-12,20H2,1-2H3,(H,21,27)(H,22,24)(H,25,26)(H2,23,28,29)/t15-,16-/m0/s1" 
JC2 InChIKey         InChI                1.03  MUFQKMHBCUDSGW-HOTGVXAUSA-N                                                                                                                                                                           
JC2 SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[C@@H](CCN)C(O)=O"                                                                                                                                    
JC2 SMILES           CACTVS               3.385 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[CH](CCN)C(O)=O"                                                                                                                                       
JC2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)C[C@@H](C(=O)N[C@@H](CCN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                     
JC2 SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)CC(C(=O)NC(CCN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JC2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-4-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JC2 "Create component" 2016-12-13 EBI  
JC2 "Initial release"  2017-06-21 RCSB 
# 
