data_JM2
# 
_chem_comp.id                                    JM2 
_chem_comp.name                                  "N~5~-[2-(methylsulfanyl)ethanimidoyl]-L-ornithine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H17 N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-15 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        219.304 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JM2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3JT3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JM2 C    C    C 0 1 N N N 9.067  -3.107 24.663 4.968  -0.278 0.080  C    JM2 1  
JM2 N    N    N 0 1 N N N 9.917  -1.500 26.280 3.767  1.782  -0.390 N    JM2 2  
JM2 C1   C1   C 0 1 N N N 13.929 0.413  23.560 -2.451 -0.153 -0.051 C1   JM2 3  
JM2 C2   C2   C 0 1 N N N 14.199 1.680  22.780 -3.705 0.587  0.337  C2   JM2 4  
JM2 S3   S3   S 0 1 N N N 13.899 1.316  21.065 -5.156 -0.367 -0.186 S3   JM2 5  
JM2 C4   C4   C 0 1 N N N 13.483 2.875  20.345 -6.543 0.668  0.359  C4   JM2 6  
JM2 CA   CA   C 0 1 N N S 9.295  -1.630 24.957 3.718  0.517  0.356  CA   JM2 7  
JM2 CB   CB   C 0 1 N N N 10.088 -0.875 23.861 2.494  -0.288 -0.085 CB   JM2 8  
JM2 CD   CD   C 0 1 N N N 11.719 0.983  23.716 -0.004 -0.341 -0.133 CD   JM2 9  
JM2 NE   NE   N 0 1 N N N 12.673 0.175  23.972 -1.223 0.379  0.244  NE   JM2 10 
JM2 CG   CG   C 0 1 N N N 10.320 0.611  24.190 1.221  0.464  0.308  CG   JM2 11 
JM2 NH   NH   N 0 1 N N N 14.937 -0.427 23.799 -2.533 -1.290 -0.661 NH   JM2 12 
JM2 OA1  OA1  O 0 1 N N N 8.575  -3.451 23.552 5.634  -0.036 -0.899 OA1  JM2 13 
JM2 OA2  OA2  O 0 1 N N N 9.347  -3.951 25.553 5.345  -1.250 0.924  OA2  JM2 14 
JM2 HN   HN   H 0 1 N N N 10.071 -0.533 26.483 4.530  2.360  -0.071 HN   JM2 15 
JM2 HNA  HNA  H 0 1 N N N 9.312  -1.893 26.973 3.831  1.614  -1.383 HNA  JM2 16 
JM2 H2   H2   H 0 1 N N N 13.532 2.486  23.120 -3.728 0.721  1.418  H2   JM2 17 
JM2 H2A  H2A  H 0 1 N N N 15.241 2.001  22.924 -3.716 1.562  -0.150 H2A  JM2 18 
JM2 H4   H4   H 0 1 N N N 13.279 2.741  19.272 -6.483 1.641  -0.129 H4   JM2 19 
JM2 H4A  H4A  H 0 1 N N N 12.588 3.280  20.840 -7.483 0.185  0.092  H4A  JM2 20 
JM2 H4B  H4B  H 0 1 N N N 14.322 3.574  20.474 -6.495 0.799  1.439  H4B  JM2 21 
JM2 HA   HA   H 0 1 N N N 8.312  -1.137 24.956 3.649  0.727  1.423  HA   JM2 22 
JM2 HB   HB   H 0 1 N N N 11.069 -1.360 23.751 2.517  -0.421 -1.166 HB   JM2 23 
JM2 HBA  HBA  H 0 1 N N N 9.518  -0.934 22.922 2.506  -1.263 0.402  HBA  JM2 24 
JM2 HD   HD   H 0 1 N N N 11.974 1.937  24.200 0.008  -1.316 0.354  HD   JM2 25 
JM2 HG   HG   H 0 1 N N N 9.571  1.231  23.676 1.197  0.598  1.390  HG   JM2 26 
JM2 HGA  HGA  H 0 1 N N N 10.235 0.774  25.275 1.209  1.439  -0.179 HGA  JM2 27 
JM2 HNH  HNH  H 0 1 N N N 15.798 -0.099 23.411 -3.403 -1.667 -0.869 HNH  JM2 28 
JM2 HOA2 HOA2 H 0 0 N N N 9.131  -4.823 25.243 6.154  -1.733 0.705  HOA2 JM2 29 
JM2 H16  H16  H 0 1 N N N 11.668 1.076  22.621 0.020  -0.475 -1.214 H16  JM2 30 
JM2 H17  H17  H 0 1 N N N 12.480 -0.657 24.493 -1.161 1.231  0.702  H17  JM2 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JM2 C   CA   SING N N 1  
JM2 C   OA2  SING N N 2  
JM2 N   HN   SING N N 3  
JM2 N   HNA  SING N N 4  
JM2 C1  NH   DOUB N N 5  
JM2 C1  NE   SING N N 6  
JM2 C2  C1   SING N N 7  
JM2 C2  H2   SING N N 8  
JM2 C2  H2A  SING N N 9  
JM2 S3  C2   SING N N 10 
JM2 C4  S3   SING N N 11 
JM2 C4  H4   SING N N 12 
JM2 C4  H4A  SING N N 13 
JM2 C4  H4B  SING N N 14 
JM2 CA  N    SING N N 15 
JM2 CA  HA   SING N N 16 
JM2 CB  CA   SING N N 17 
JM2 CB  CG   SING N N 18 
JM2 CB  HB   SING N N 19 
JM2 CB  HBA  SING N N 20 
JM2 CD  NE   SING N N 21 
JM2 CD  CG   SING N N 22 
JM2 CD  HD   SING N N 23 
JM2 CG  HG   SING N N 24 
JM2 CG  HGA  SING N N 25 
JM2 NH  HNH  SING N N 26 
JM2 OA1 C    DOUB N N 27 
JM2 OA2 HOA2 SING N N 28 
JM2 CD  H16  SING N N 29 
JM2 NE  H17  SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JM2 SMILES           ACDLabs              11.02 "O=C(O)C(N)CCCNC(=[N@H])CSC"                                                                          
JM2 SMILES_CANONICAL CACTVS               3.352 "CSCC(=N)NCCC[C@H](N)C(O)=O"                                                                          
JM2 SMILES           CACTVS               3.352 "CSCC(=N)NCCC[CH](N)C(O)=O"                                                                           
JM2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "[H]/N=C(\CSC)/NCCC[C@@H](C(=O)O)N"                                                                   
JM2 SMILES           "OpenEye OEToolkits" 1.7.0 "CSCC(=N)NCCCC(C(=O)O)N"                                                                              
JM2 InChI            InChI                1.03  "InChI=1S/C8H17N3O2S/c1-14-5-7(10)11-4-2-3-6(9)8(12)13/h6H,2-5,9H2,1H3,(H2,10,11)(H,12,13)/t6-/m0/s1" 
JM2 InChIKey         InChI                1.03  VXQPBNRYLWZLLJ-LURJTMIESA-N                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JM2 "SYSTEMATIC NAME" ACDLabs              11.02 "N~5~-[(1E)-2-(methylsulfanyl)ethanimidoyl]-L-ornithine"            
JM2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S)-2-azanyl-5-(2-methylsulfanylethanimidoylamino)pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JM2 "Create component"  2009-09-15 RCSB 
JM2 "Modify descriptor" 2011-06-04 RCSB 
# 
