data_KB2
# 
_chem_comp.id                                    KB2 
_chem_comp.name                                  "(3S)-3-(4-{(1S)-1,2-dimethyl-1-[(quinolin-6-ylmethyl)amino]propyl}-1H-1,2,3-triazol-1-yl)heptan-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H33 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-09 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        407.552 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KB2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3IUT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KB2 C1   C1   C 0 1 Y N N N N N 0.879  13.317 -1.389 6.627  -2.957 -0.304 C1   KB2 1  
KB2 N2   N2   N 0 1 Y N N N N N 1.352  14.003 -0.363 5.916  -2.655 0.755  N2   KB2 2  
KB2 C3   C3   C 0 1 Y N N N N N 0.869  13.788 0.896  5.062  -1.627 0.748  C3   KB2 3  
KB2 C4   C4   C 0 1 Y N N N N N -0.100 12.771 1.139  4.916  -0.840 -0.422 C4   KB2 4  
KB2 C5   C5   C 0 1 Y N N N N N -0.619 12.112 0.028  5.678  -1.161 -1.560 C5   KB2 5  
KB2 C6   C6   C 0 1 Y N N N N N -0.092 12.397 -1.199 6.531  -2.225 -1.485 C6   KB2 6  
KB2 C7   C7   C 0 1 Y N N N N N -0.507 12.548 2.470  4.017  0.239  -0.424 C7   KB2 7  
KB2 C8   C8   C 0 1 Y N N N N N 0.051  13.268 3.520  3.297  0.517  0.697  C8   KB2 8  
KB2 C9   C9   C 0 1 Y N N N N N 0.991  14.284 3.268  3.439  -0.255 1.849  C9   KB2 9  
KB2 C10  C10  C 0 1 Y N N N N N 1.405  14.529 1.963  4.301  -1.307 1.886  C10  KB2 10 
KB2 C11  C11  C 0 1 N N N N N N -0.324 12.915 4.985  2.333  1.676  0.694  C11  KB2 11 
KB2 N12  N12  N 0 1 N N N N N N -0.145 11.391 5.168  1.011  1.212  0.253  N12  KB2 12 
KB2 C13  C13  C 0 1 N N S N N N 0.245  10.920 6.529  0.043  2.317  0.237  C13  KB2 13 
KB2 C14  C14  C 0 1 Y N N N N N 1.606  11.579 6.865  -1.298 1.804  -0.219 C14  KB2 14 
KB2 N15  N15  N 0 1 Y N N N N N 2.652  11.432 5.986  -1.986 2.206  -1.293 N15  KB2 15 
KB2 N16  N16  N 0 1 Y N N N N N 3.672  12.039 6.463  -3.085 1.541  -1.357 N16  KB2 16 
KB2 N17  N17  N 0 1 Y N N N N N 3.331  12.508 7.611  -3.161 0.713  -0.375 N17  KB2 17 
KB2 C18  C18  C 0 1 Y N N N N N 2.036  12.271 7.923  -2.041 0.841  0.375  C18  KB2 18 
KB2 C19  C19  C 0 1 N N S N N N 4.339  13.299 8.361  -4.266 -0.212 -0.115 C19  KB2 19 
KB2 C20  C20  C 0 1 N N N N N N 5.173  12.433 9.304  -4.466 -0.352 1.372  C20  KB2 20 
KB2 O21  O21  O 0 1 N N N N N N 6.408  12.541 9.354  -3.547 -0.142 2.127  O21  KB2 21 
KB2 C22  C22  C 0 1 N N N N N N 4.526  11.385 10.102 -5.812 -0.753 1.918  C22  KB2 22 
KB2 C23  C23  C 0 1 N N N N N N 3.728  14.482 9.042  -3.939 -1.580 -0.716 C23  KB2 23 
KB2 C24  C24  C 0 1 N N N N N N 3.254  15.490 7.965  -5.143 -2.510 -0.555 C24  KB2 24 
KB2 C25  C25  C 0 1 N N N N N N 4.397  16.139 7.183  -4.815 -3.878 -1.156 C25  KB2 25 
KB2 C26  C26  C 0 1 N N N N N N 5.003  17.382 7.865  -6.019 -4.808 -0.995 C26  KB2 26 
KB2 C27  C27  C 0 1 N N N N N N 0.415  9.366  6.458  0.527  3.405  -0.724 C27  KB2 27 
KB2 C28  C28  C 0 1 N N N N N N -0.825 8.592  6.117  0.537  2.855  -2.152 C28  KB2 28 
KB2 C29  C29  C 0 1 N N N N N N 1.069  8.793  7.759  -0.414 4.609  -0.647 C29  KB2 29 
KB2 C30  C30  C 0 1 N N N N N N -0.865 11.322 7.552  -0.086 2.902  1.645  C30  KB2 30 
KB2 H1   H1   H 0 1 N N N N N N 1.269  13.492 -2.381 7.309  -3.793 -0.258 H1   KB2 31 
KB2 H5   H5   H 0 1 N N N N N N -1.418 11.393 0.134  5.591  -0.582 -2.468 H5   KB2 32 
KB2 H6   H6   H 0 1 N N N N N N -0.469 11.862 -2.058 7.131  -2.499 -2.341 H6   KB2 33 
KB2 H7   H7   H 0 1 N N N N N N -1.264 11.806 2.677  3.898  0.845  -1.310 H7   KB2 34 
KB2 H9   H9   H 0 1 N N N N N N 1.389  14.870 4.083  2.857  -0.014 2.726  H9   KB2 35 
KB2 H10  H10  H 0 1 N N N N N N 2.143  15.293 1.768  4.400  -1.895 2.786  H10  KB2 36 
KB2 H11  H11  H 0 1 N N N N N N 0.332  13.457 5.682  2.257  2.088  1.700  H11  KB2 37 
KB2 H11A H11A H 0 0 N N N N N N -1.368 13.198 5.184  2.694  2.446  0.012  H11A KB2 38 
KB2 HN12 HN12 H 0 0 N N N N N N -1.022 10.963 4.948  1.067  0.767  -0.651 HN12 KB2 39 
KB2 H18  H18  H 0 1 N N N N N N 1.488  12.567 8.805  -1.792 0.288  1.268  H18  KB2 40 
KB2 H19  H19  H 0 1 N N N N N N 5.046  13.702 7.621  -5.179 0.175  -0.569 H19  KB2 41 
KB2 H22  H22  H 0 1 N N N N N N 5.290  10.821 10.657 -6.510 -0.898 1.093  H22  KB2 42 
KB2 H22A H22A H 0 0 N N N N N N 3.823  11.846 10.812 -5.715 -1.683 2.478  H22A KB2 43 
KB2 H22B H22B H 0 0 N N N N N N 3.979  10.702 9.435  -6.186 0.031  2.576  H22B KB2 44 
KB2 H23  H23  H 0 1 N N N N N N 2.870  14.158 9.649  -3.707 -1.466 -1.775 H23  KB2 45 
KB2 H23A H23A H 0 0 N N N N N N 4.474  14.960 9.694  -3.078 -2.007 -0.200 H23A KB2 46 
KB2 H24  H24  H 0 1 N N N N N N 2.615  14.950 7.250  -5.374 -2.625 0.504  H24  KB2 47 
KB2 H24A H24A H 0 0 N N N N N N 2.690  16.288 8.470  -6.003 -2.083 -1.071 H24A KB2 48 
KB2 H25  H25  H 0 1 N N N N N N 5.196  15.392 7.069  -4.584 -3.764 -2.215 H25  KB2 49 
KB2 H25A H25A H 0 0 N N N N N N 4.004  16.448 6.203  -3.955 -4.305 -0.640 H25A KB2 50 
KB2 H26  H26  H 0 1 N N N N N N 5.814  17.785 7.240  -5.786 -5.783 -1.423 H26  KB2 51 
KB2 H26A H26A H 0 0 N N N N N N 4.223  18.147 7.992  -6.251 -4.923 0.064  H26A KB2 52 
KB2 H26B H26B H 0 0 N N N N N N 5.404  17.101 8.850  -6.879 -4.381 -1.510 H26B KB2 53 
KB2 H27  H27  H 0 1 N N N N N N 1.094  9.220  5.605  1.535  3.713  -0.446 H27  KB2 54 
KB2 H28  H28  H 0 1 N N N N N N -0.592 7.517  6.094  -0.470 2.547  -2.430 H28  KB2 55 
KB2 H28A H28A H 0 0 N N N N N N -1.597 8.784  6.876  0.882  3.630  -2.837 H28A KB2 56 
KB2 H28B H28B H 0 0 N N N N N N -1.194 8.908  5.130  1.208  1.998  -2.207 H28B KB2 57 
KB2 H29  H29  H 0 1 N N N N N N 1.170  7.701  7.669  -0.422 5.000  0.370  H29  KB2 58 
KB2 H29A H29A H 0 0 N N N N N N 2.063  9.243  7.898  -0.070 5.383  -1.332 H29A KB2 59 
KB2 H29B H29B H 0 0 N N N N N N 0.433  9.032  8.624  -1.422 4.300  -0.925 H29B KB2 60 
KB2 H30  H30  H 0 1 N N N N N N -0.581 10.976 8.557  0.884  3.273  1.975  H30  KB2 61 
KB2 H30A H30A H 0 0 N N N N N N -0.978 12.416 7.559  -0.804 3.722  1.633  H30A KB2 62 
KB2 H30B H30B H 0 0 N N N N N N -1.818 10.857 7.260  -0.431 2.127  2.330  H30B KB2 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KB2 C1  C6   DOUB Y N 1  
KB2 C1  N2   SING Y N 2  
KB2 C1  H1   SING N N 3  
KB2 N2  C3   DOUB Y N 4  
KB2 C3  C4   SING Y N 5  
KB2 C3  C10  SING Y N 6  
KB2 C5  C4   DOUB Y N 7  
KB2 C4  C7   SING Y N 8  
KB2 C6  C5   SING Y N 9  
KB2 C5  H5   SING N N 10 
KB2 C6  H6   SING N N 11 
KB2 C7  C8   DOUB Y N 12 
KB2 C7  H7   SING N N 13 
KB2 C9  C8   SING Y N 14 
KB2 C8  C11  SING N N 15 
KB2 C10 C9   DOUB Y N 16 
KB2 C9  H9   SING N N 17 
KB2 C10 H10  SING N N 18 
KB2 C11 N12  SING N N 19 
KB2 C11 H11  SING N N 20 
KB2 C11 H11A SING N N 21 
KB2 N12 C13  SING N N 22 
KB2 N12 HN12 SING N N 23 
KB2 C27 C13  SING N N 24 
KB2 C13 C14  SING N N 25 
KB2 C13 C30  SING N N 26 
KB2 N15 C14  SING Y N 27 
KB2 C14 C18  DOUB Y N 28 
KB2 N15 N16  DOUB Y N 29 
KB2 N16 N17  SING Y N 30 
KB2 N17 C18  SING Y N 31 
KB2 N17 C19  SING N N 32 
KB2 C18 H18  SING N N 33 
KB2 C19 C23  SING N N 34 
KB2 C19 C20  SING N N 35 
KB2 C19 H19  SING N N 36 
KB2 C20 O21  DOUB N N 37 
KB2 C20 C22  SING N N 38 
KB2 C22 H22  SING N N 39 
KB2 C22 H22A SING N N 40 
KB2 C22 H22B SING N N 41 
KB2 C24 C23  SING N N 42 
KB2 C23 H23  SING N N 43 
KB2 C23 H23A SING N N 44 
KB2 C25 C24  SING N N 45 
KB2 C24 H24  SING N N 46 
KB2 C24 H24A SING N N 47 
KB2 C25 C26  SING N N 48 
KB2 C25 H25  SING N N 49 
KB2 C25 H25A SING N N 50 
KB2 C26 H26  SING N N 51 
KB2 C26 H26A SING N N 52 
KB2 C26 H26B SING N N 53 
KB2 C28 C27  SING N N 54 
KB2 C27 C29  SING N N 55 
KB2 C27 H27  SING N N 56 
KB2 C28 H28  SING N N 57 
KB2 C28 H28A SING N N 58 
KB2 C28 H28B SING N N 59 
KB2 C29 H29  SING N N 60 
KB2 C29 H29A SING N N 61 
KB2 C29 H29B SING N N 62 
KB2 C30 H30  SING N N 63 
KB2 C30 H30A SING N N 64 
KB2 C30 H30B SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KB2 SMILES           ACDLabs              11.02 "O=C(C(n1nnc(c1)C(NCc3cc2cccnc2cc3)(C)C(C)C)CCCC)C"                                                                                                                      
KB2 SMILES_CANONICAL CACTVS               3.352 "CCCC[C@H](n1cc(nn1)[C@@](C)(NCc2ccc3ncccc3c2)C(C)C)C(C)=O"                                                                                                              
KB2 SMILES           CACTVS               3.352 "CCCC[CH](n1cc(nn1)[C](C)(NCc2ccc3ncccc3c2)C(C)C)C(C)=O"                                                                                                                 
KB2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCC[C@@H](C(=O)C)n1cc(nn1)[C@](C)(C(C)C)NCc2ccc3c(c2)cccn3"                                                                                                            
KB2 SMILES           "OpenEye OEToolkits" 1.7.0 "CCCCC(C(=O)C)n1cc(nn1)C(C)(C(C)C)NCc2ccc3c(c2)cccn3"                                                                                                                    
KB2 InChI            InChI                1.03  "InChI=1S/C24H33N5O/c1-6-7-10-22(18(4)30)29-16-23(27-28-29)24(5,17(2)3)26-15-19-11-12-21-20(14-19)9-8-13-25-21/h8-9,11-14,16-17,22,26H,6-7,10,15H2,1-5H3/t22-,24-/m0/s1" 
KB2 InChIKey         InChI                1.03  XHOTUPQHXLRCJV-UPVQGACJSA-N                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KB2 "SYSTEMATIC NAME" ACDLabs              11.02 "(3S)-3-(4-{(2S)-3-methyl-2-[(quinolin-6-ylmethyl)amino]butan-2-yl}-1H-1,2,3-triazol-1-yl)heptan-2-one" 
KB2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(3S)-3-[4-[(2S)-3-methyl-2-(quinolin-6-ylmethylamino)butan-2-yl]-1,2,3-triazol-1-yl]heptan-2-one"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KB2 "Create component"     2009-09-09 RCSB 
KB2 "Modify aromatic_flag" 2011-06-04 RCSB 
KB2 "Modify descriptor"    2011-06-04 RCSB 
KB2 "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KB2 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C22 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
