data_MA2
#

_chem_comp.id                                   MA2
_chem_comp.name                                 4-S-methyl-4-thio-alpha-D-glucopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-S-methyl-4-thio-alpha-D-glucose; 4-S-methyl-4-thio-D-glucose; 4-S-methyl-4-thio-glucose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       210.248
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MA2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1JFH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  MA2  4-S-methyl-4-thio-alpha-D-glucose  PDB  ?  
2  MA2  4-S-methyl-4-thio-D-glucose        PDB  ?  
3  MA2  4-S-methyl-4-thio-glucose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MA2  C1   C1   C  0  1  N  N  S   -7.763  41.728  20.939  -1.648  -0.055  -1.219  C1   MA2   1  
MA2  C2   C2   C  0  1  N  N  R   -8.700  40.523  20.840  -0.410   0.471  -1.947  C2   MA2   2  
MA2  C3   C3   C  0  1  N  N  R   -9.990  40.906  20.103   0.838   0.132  -1.125  C3   MA2   3  
MA2  C4   C4   C  0  1  N  N  S  -10.635  42.125  20.764   0.643   0.659   0.301  C4   MA2   4  
MA2  C5   C5   C  0  1  N  N  R   -9.603  43.257  20.802  -0.674   0.117   0.859  C5   MA2   5  
MA2  C6   C6   C  0  1  N  N  N  -10.112  44.521  21.470  -0.861   0.614   2.294  C6   MA2   6  
MA2  C7   C7   C  0  1  N  N  N  -11.711  42.803  18.201   1.784  -1.690   1.248  C7   MA2   7  
MA2  O1   O1   O  0  1  N  Y  N   -7.059  42.161  19.318  -1.528  -1.469  -1.044  O1   MA2   8  
MA2  O2   O2   O  0  1  N  N  N   -8.050  39.470  20.144  -0.316  -0.139  -3.236  O2   MA2   9  
MA2  O3   O3   O  0  1  N  N  N  -10.898  39.814  20.124   1.984   0.746  -1.717  O3   MA2  10  
MA2  S4   S4   S  0  1  N  N  N  -12.202  42.646  19.955   2.019   0.105   1.346  S4   MA2  11  
MA2  O5   O5   O  0  1  N  N  N   -8.444  42.824  21.534  -1.762   0.571   0.056  O5   MA2  12  
MA2  O6   O6   O  0  1  N  N  N  -10.533  44.263  22.801  -2.091   0.109   2.817  O6   MA2  13  
MA2  H1   H1   H  0  1  N  N  N   -6.902  41.457  21.594  -2.537   0.162  -1.810  H1   MA2  14  
MA2  H2   H2   H  0  1  N  N  N   -8.961  40.186  21.870  -0.487   1.552  -2.061  H2   MA2  15  
MA2  H3   H3   H  0  1  N  N  N   -9.739  41.158  19.046   0.975  -0.948  -1.097  H3   MA2  16  
MA2  H4   H4   H  0  1  N  N  N  -10.932  41.849  21.802   0.612   1.749   0.286  H4   MA2  17  
MA2  H5   H5   H  0  1  N  N  N   -9.369  43.495  19.738  -0.649  -0.971   0.853  H5   MA2  18  
MA2  H61  H61  H  0  1  N  N  N   -9.355  45.339  21.430  -0.033   0.264   2.911  H61  MA2  19  
MA2  H62  H62  H  0  1  N  N  N  -10.918  45.005  20.871  -0.883   1.704   2.301  H62  MA2  20  
MA2  H71  H71  H  0  1  N  N  N  -12.661  43.118  17.710   2.562  -2.190   1.827  H71  MA2  21  
MA2  H72  H72  H  0  1  N  N  N  -10.842  43.476  18.016   0.806  -1.951   1.653  H72  MA2  22  
MA2  H73  H73  H  0  1  N  N  N  -11.238  41.892  17.763   1.844  -2.009   0.208  H73  MA2  23  
MA2  HO1  HO1  H  0  1  N  Y  N   -6.477  42.909  19.379  -2.328  -1.762  -0.587  HO1  MA2  24  
MA2  HO2  HO2  H  0  1  N  Y  N   -8.631  38.721  20.082  -1.123   0.095  -3.715  HO2  MA2  25  
MA2  HO3  HO3  H  0  1  N  Y  N  -11.696  40.051  19.667   2.058   0.392  -2.614  HO3  MA2  26  
MA2  HO6  HO6  H  0  1  N  Y  N  -10.851  45.054  23.219  -2.170   0.445   3.720  HO6  MA2  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MA2  C1  C2   SING  N  N   1  
MA2  C1  O1   SING  N  N   2  
MA2  C1  O5   SING  N  N   3  
MA2  C1  H1   SING  N  N   4  
MA2  C2  C3   SING  N  N   5  
MA2  C2  O2   SING  N  N   6  
MA2  C2  H2   SING  N  N   7  
MA2  C3  C4   SING  N  N   8  
MA2  C3  O3   SING  N  N   9  
MA2  C3  H3   SING  N  N  10  
MA2  C4  C5   SING  N  N  11  
MA2  C4  S4   SING  N  N  12  
MA2  C4  H4   SING  N  N  13  
MA2  C5  C6   SING  N  N  14  
MA2  C5  O5   SING  N  N  15  
MA2  C5  H5   SING  N  N  16  
MA2  C6  O6   SING  N  N  17  
MA2  C6  H61  SING  N  N  18  
MA2  C6  H62  SING  N  N  19  
MA2  C7  S4   SING  N  N  20  
MA2  C7  H71  SING  N  N  21  
MA2  C7  H72  SING  N  N  22  
MA2  C7  H73  SING  N  N  23  
MA2  O1  HO1  SING  N  N  24  
MA2  O2  HO2  SING  N  N  25  
MA2  O3  HO3  SING  N  N  26  
MA2  O6  HO6  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MA2  SMILES            ACDLabs               10.04  "OC1C(SC)C(OC(O)C1O)CO"  
MA2  SMILES_CANONICAL  CACTVS                3.341  "CS[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O"  
MA2  SMILES            CACTVS                3.341  "CS[CH]1[CH](CO)O[CH](O)[CH](O)[CH]1O"  
MA2  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CS[C@@H]1[C@H](O[C@@H]([C@@H]([C@H]1O)O)O)CO"  
MA2  SMILES            "OpenEye OEToolkits"  1.5.0  "CSC1C(OC(C(C1O)O)O)CO"  
MA2  InChI             InChI                 1.03   "InChI=1S/C7H14O5S/c1-13-6-3(2-8)12-7(11)5(10)4(6)9/h3-11H,2H2,1H3/t3-,4-,5-,6-,7+/m1/s1"  
MA2  InChIKey          InChI                 1.03   UYUQSQYXZFSOEM-GKHCUFPYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MA2  "SYSTEMATIC NAME"  ACDLabs               10.04  4-S-methyl-4-thio-alpha-D-glucopyranose  
MA2  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3R,4R,5S,6R)-6-(hydroxymethyl)-5-methylsulfanyl-oxane-2,3,4-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
MA2  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
MA2  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
MA2  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
MA2  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MA2  "Create component"          1999-07-08  EBI   
MA2  "Modify descriptor"         2011-06-04  RCSB  
MA2  "Other modification"        2020-07-03  RCSB  
MA2  "Modify synonyms"           2020-07-17  RCSB  
MA2  "Modify linking type"       2020-07-17  RCSB  
MA2  "Modify leaving atom flag"  2020-07-17  RCSB  
##
