data_OD2
#

_chem_comp.id                                   OD2
_chem_comp.name                                 "2-[6-(4-methylsulfanylphenyl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H12 N2 O2 S3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-27
_chem_comp.pdbx_modified_date                   2020-03-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       348.463
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OD2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Y6F
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OD2  C    C1   C  0  1  N  N  N  58.968   3.834  -0.888   6.211  -1.542   0.001  C    OD2   1  
OD2  O    O1   O  0  1  N  N  N  57.889   4.358  -0.698   5.740  -2.655  -0.000  O    OD2   2  
OD2  O1   O2   O  0  1  N  N  N  59.987   3.984  -0.113   7.543  -1.378  -0.004  O1   OD2   3  
OD2  C1   C2   C  0  1  N  N  N  59.283   2.950  -2.063   5.303  -0.340   0.002  C1   OD2   4  
OD2  S    S1   S  0  1  N  N  N  61.029   2.502  -2.140   3.578  -0.886   0.000  S    OD2   5  
OD2  C2   C3   C  0  1  Y  N  N  61.122   1.569  -3.617   2.762   0.675   0.001  C2   OD2   6  
OD2  N1   N1   N  0  1  Y  N  N  60.035   1.404  -4.383   3.463   1.804   0.002  N1   OD2   7  
OD2  C14  C4   C  0  1  Y  N  N  60.246   0.762  -5.534   2.857   2.977   0.003  C14  OD2   8  
OD2  N    N2   N  0  1  Y  N  N  61.383   0.235  -5.998   1.553   3.097   0.003  N    OD2   9  
OD2  C4   C5   C  0  1  Y  N  N  62.454   0.398  -5.178   0.750   2.006   0.002  C4   OD2  10  
OD2  C5   C6   C  0  1  Y  N  N  63.804  -0.026  -5.430  -0.648   1.928   0.001  C5   OD2  11  
OD2  C6   C7   C  0  1  Y  N  N  64.687   0.350  -4.492  -1.157   0.691   0.000  C6   OD2  12  
OD2  S1   S2   S  0  1  Y  N  N  63.915   1.223  -3.209   0.128  -0.506  -0.001  S1   OD2  13  
OD2  C3   C8   C  0  1  Y  N  N  62.365   1.084  -3.967   1.359   0.748  -0.005  C3   OD2  14  
OD2  C7   C9   C  0  1  Y  N  N  66.142   0.163  -4.471  -2.601   0.375  -0.000  C7   OD2  15  
OD2  C12  C10  C  0  1  Y  N  N  66.793  -0.506  -5.506  -3.543   1.406  -0.005  C12  OD2  16  
OD2  C11  C11  C  0  1  Y  N  N  68.153  -0.757  -5.439  -4.888   1.109  -0.005  C11  OD2  17  
OD2  C10  C12  C  0  1  Y  N  N  68.886  -0.350  -4.335  -5.309  -0.217  -0.001  C10  OD2  18  
OD2  S2   S3   S  0  1  N  N  N  70.590  -0.793  -4.342  -7.030  -0.594  -0.001  S2   OD2  19  
OD2  C13  C13  C  0  1  N  N  N  71.127  -0.491  -2.655  -7.051  -2.408   0.006  C13  OD2  20  
OD2  C9   C14  C  0  1  Y  N  N  68.253   0.339  -3.311  -4.373  -1.247   0.004  C9   OD2  21  
OD2  C8   C15  C  0  1  Y  N  N  66.898   0.597  -3.381  -3.026  -0.955  -0.002  C8   OD2  22  
OD2  H1   H1   H  0  1  N  N  N  59.755   4.557   0.609   8.085  -2.179  -0.008  H1   OD2  23  
OD2  H2   H2   H  0  1  N  N  N  59.014   3.482  -2.987   5.494   0.259   0.892  H2   OD2  24  
OD2  H3   H3   H  0  1  N  N  N  58.686   2.030  -1.983   5.495   0.261  -0.888  H3   OD2  25  
OD2  H4   H4   H  0  1  N  N  N  59.384   0.654  -6.175   3.460   3.873   0.005  H4   OD2  26  
OD2  H5   H5   H  0  1  N  N  N  64.084  -0.599  -6.301  -1.274   2.809   0.002  H5   OD2  27  
OD2  H6   H6   H  0  1  N  N  N  66.231  -0.832  -6.369  -3.217   2.436  -0.008  H6   OD2  28  
OD2  H7   H7   H  0  1  N  N  N  68.645  -1.272  -6.251  -5.616   1.906  -0.009  H7   OD2  29  
OD2  H8   H8   H  0  1  N  N  N  72.194  -0.742  -2.559  -6.540  -2.780  -0.882  H8   OD2  30  
OD2  H9   H9   H  0  1  N  N  N  70.976   0.570  -2.407  -6.542  -2.773   0.898  H9   OD2  31  
OD2  H10  H10  H  0  1  N  N  N  70.540  -1.116  -1.966  -8.083  -2.759   0.006  H10  OD2  32  
OD2  H11  H11  H  0  1  N  N  N  68.821   0.675  -2.456  -4.702  -2.275   0.007  H11  OD2  33  
OD2  H12  H12  H  0  1  N  N  N  66.417   1.142  -2.582  -2.300  -1.755  -0.002  H12  OD2  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OD2  N    C14  DOUB  Y  N   1  
OD2  N    C4   SING  Y  N   2  
OD2  C14  N1   SING  Y  N   3  
OD2  C12  C11  DOUB  Y  N   4  
OD2  C12  C7   SING  Y  N   5  
OD2  C11  C10  SING  Y  N   6  
OD2  C5   C4   SING  Y  N   7  
OD2  C5   C6   DOUB  Y  N   8  
OD2  C4   C3   DOUB  Y  N   9  
OD2  C6   C7   SING  N  N  10  
OD2  C6   S1   SING  Y  N  11  
OD2  C7   C8   DOUB  Y  N  12  
OD2  N1   C2   DOUB  Y  N  13  
OD2  S2   C10  SING  N  N  14  
OD2  S2   C13  SING  N  N  15  
OD2  C10  C9   DOUB  Y  N  16  
OD2  C3   C2   SING  Y  N  17  
OD2  C3   S1   SING  Y  N  18  
OD2  C2   S    SING  N  N  19  
OD2  C8   C9   SING  Y  N  20  
OD2  S    C1   SING  N  N  21  
OD2  C1   C    SING  N  N  22  
OD2  C    O    DOUB  N  N  23  
OD2  C    O1   SING  N  N  24  
OD2  O1   H1   SING  N  N  25  
OD2  C1   H2   SING  N  N  26  
OD2  C1   H3   SING  N  N  27  
OD2  C14  H4   SING  N  N  28  
OD2  C5   H5   SING  N  N  29  
OD2  C12  H6   SING  N  N  30  
OD2  C11  H7   SING  N  N  31  
OD2  C13  H8   SING  N  N  32  
OD2  C13  H9   SING  N  N  33  
OD2  C13  H10  SING  N  N  34  
OD2  C9   H11  SING  N  N  35  
OD2  C8   H12  SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OD2  InChI             InChI                 1.03   "InChI=1S/C15H12N2O2S3/c1-20-10-4-2-9(3-5-10)12-6-11-14(22-12)15(17-8-16-11)21-7-13(18)19/h2-6,8H,7H2,1H3,(H,18,19)"  
OD2  InChIKey          InChI                 1.03   KJCQGDBVLKOAHP-UHFFFAOYSA-N  
OD2  SMILES_CANONICAL  CACTVS                3.385  "CSc1ccc(cc1)c2sc3c(SCC(O)=O)ncnc3c2"  
OD2  SMILES            CACTVS                3.385  "CSc1ccc(cc1)c2sc3c(SCC(O)=O)ncnc3c2"  
OD2  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CSc1ccc(cc1)c2cc3c(s2)c(ncn3)SCC(=O)O"  
OD2  SMILES            "OpenEye OEToolkits"  2.0.7  "CSc1ccc(cc1)c2cc3c(s2)c(ncn3)SCC(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          OD2
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-[6-(4-methylsulfanylphenyl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OD2  "Create component"  2020-02-27  PDBE  
OD2  "Initial release"   2020-03-11  RCSB  
##
