data_OS2
#

_chem_comp.id                                   OS2
_chem_comp.name                                 "(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(prop-2-yn-1-yl)sulfanyl]methyl}pyrrolidin-3-ol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H19 N5 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-03
_chem_comp.pdbx_modified_date                   2019-03-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       317.409
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OS2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DYU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OS2  "O3'"  O1   O  0  1  N  N  N  -29.618  -36.926  -55.831  -1.351   2.729   1.811  "O3'"  OS2   1  
OS2  "C3'"  C1   C  0  1  N  N  R  -30.653  -35.940  -55.725  -1.465   2.151   0.510  "C3'"  OS2   2  
OS2  "C2'"  C2   C  0  1  N  N  N  -30.082  -34.738  -54.986  -0.073   1.782  -0.035  "C2'"  OS2   3  
OS2  "N1'"  N1   N  0  1  N  N  N  -29.230  -34.136  -56.034  -0.057   0.316  -0.227  "N1'"  OS2   4  
OS2  "C1'"  C3   C  0  1  N  N  N  -29.903  -34.318  -57.335  -1.474  -0.082  -0.425  "C1'"  OS2   5  
OS2  "C4'"  C4   C  0  1  N  N  S  -31.001  -35.331  -57.076  -2.238   0.814   0.582  "C4'"  OS2   6  
OS2  "C5'"  C5   C  0  1  N  N  N  -32.308  -34.581  -57.128  -3.691   1.005   0.143  "C5'"  OS2   7  
OS2  "S5'"  S1   S  0  1  N  N  N  -33.649  -35.671  -57.277  -4.565  -0.582   0.240  "S5'"  OS2   8  
OS2  C20    C6   C  0  1  N  N  N  -33.650  -36.085  -59.024  -6.241  -0.159  -0.310  C20    OS2   9  
OS2  C21    C7   C  0  1  N  N  N  -34.776  -36.981  -59.236  -7.084  -1.366  -0.285  C21    OS2  10  
OS2  C22    C8   C  0  1  N  N  N  -35.783  -37.734  -59.357  -7.757  -2.328  -0.266  C22    OS2  11  
OS2  C10    C9   C  0  1  N  N  N  -28.772  -32.783  -55.774   0.761  -0.054  -1.390  C10    OS2  12  
OS2  C9     C10  C  0  1  Y  N  N  -29.707  -31.621  -55.884   2.214   0.200  -1.083  C9     OS2  13  
OS2  C4     C11  C  0  1  Y  N  N  -30.771  -31.194  -54.978   3.101  -0.661  -0.308  C4     OS2  14  
OS2  N3     N2   N  0  1  Y  N  N  -31.276  -31.758  -53.868   2.964  -1.830   0.325  N3     OS2  15  
OS2  C8     C12  C  0  1  Y  N  N  -29.661  -30.632  -56.843   2.941   1.262  -1.477  C8     OS2  16  
OS2  N7     N3   N  0  1  Y  N  N  -30.582  -29.665  -56.635   4.218   1.149  -1.011  N7     OS2  17  
OS2  C5     C13  C  0  1  Y  N  N  -31.286  -29.957  -55.521   4.350  -0.016  -0.292  C5     OS2  18  
OS2  C6     C14  C  0  1  Y  N  N  -32.401  -29.369  -54.802   5.401  -0.632   0.397  C6     OS2  19  
OS2  N6     N4   N  0  1  N  N  N  -32.916  -28.218  -55.257   6.654  -0.043   0.448  N6     OS2  20  
OS2  N1     N5   N  0  1  Y  N  N  -32.859  -29.981  -53.680   5.172  -1.793   1.001  N1     OS2  21  
OS2  C2     C15  C  0  1  Y  N  N  -32.308  -31.146  -53.259   3.984  -2.369   0.955  C2     OS2  22  
OS2  H1     H1   H  0  1  N  N  N  -29.429  -37.282  -54.970  -0.838   3.549   1.835  H1     OS2  23  
OS2  H2     H2   H  0  1  N  N  N  -31.551  -36.325  -55.221  -1.965   2.843  -0.168  H2     OS2  24  
OS2  H3     H3   H  0  1  N  N  N  -29.489  -35.046  -54.112   0.098   2.283  -0.988  H3     OS2  25  
OS2  H4     H4   H  0  1  N  N  N  -30.876  -34.047  -54.666   0.695   2.074   0.681  H4     OS2  26  
OS2  H6     H6   H  0  1  N  N  N  -29.195  -34.700  -58.085  -1.794   0.127  -1.446  H6     OS2  27  
OS2  H7     H7   H  0  1  N  N  N  -30.330  -33.367  -57.685  -1.615  -1.136  -0.185  H7     OS2  28  
OS2  H8     H8   H  0  1  N  N  N  -30.983  -36.110  -57.852  -2.189   0.394   1.587  H8     OS2  29  
OS2  H9     H9   H  0  1  N  N  N  -32.299  -33.903  -57.994  -4.177   1.727   0.799  H9     OS2  30  
OS2  H10    H10  H  0  1  N  N  N  -32.423  -33.995  -56.204  -3.716   1.371  -0.883  H10    OS2  31  
OS2  H11    H11  H  0  1  N  N  N  -32.709  -36.586  -59.296  -6.663   0.592   0.357  H11    OS2  32  
OS2  H12    H12  H  0  1  N  N  N  -33.769  -35.175  -59.630  -6.202   0.236  -1.324  H12    OS2  33  
OS2  H13    H13  H  0  1  N  N  N  -36.628  -38.366  -59.459  -8.358  -3.188  -0.249  H13    OS2  34  
OS2  H14    H14  H  0  1  N  N  N  -28.384  -32.776  -54.745   0.616  -1.111  -1.614  H14    OS2  35  
OS2  H15    H15  H  0  1  N  N  N  -27.949  -32.590  -56.478   0.461   0.544  -2.250  H15    OS2  36  
OS2  H16    H16  H  0  1  N  N  N  -28.966  -30.630  -57.669   2.569   2.083  -2.072  H16    OS2  37  
OS2  H17    H17  H  0  1  N  N  N  -30.720  -28.861  -57.214   4.928   1.792  -1.165  H17    OS2  38  
OS2  H18    H18  H  0  1  N  N  N  -33.653  -27.919  -54.650   6.810   0.805   0.004  H18    OS2  39  
OS2  H19    H19  H  0  1  N  N  N  -32.201  -27.520  -55.282   7.376  -0.478   0.928  H19    OS2  40  
OS2  H20    H20  H  0  1  N  N  N  -32.724  -31.613  -52.378   3.844  -3.315   1.458  H20    OS2  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OS2  C22    C21    TRIP  N  N   1  
OS2  C21    C20    SING  N  N   2  
OS2  C20    "S5'"  SING  N  N   3  
OS2  "C1'"  "C4'"  SING  N  N   4  
OS2  "C1'"  "N1'"  SING  N  N   5  
OS2  "S5'"  "C5'"  SING  N  N   6  
OS2  "C5'"  "C4'"  SING  N  N   7  
OS2  "C4'"  "C3'"  SING  N  N   8  
OS2  C8     N7     SING  Y  N   9  
OS2  C8     C9     DOUB  Y  N  10  
OS2  N7     C5     SING  Y  N  11  
OS2  "N1'"  C10    SING  N  N  12  
OS2  "N1'"  "C2'"  SING  N  N  13  
OS2  C9     C10    SING  N  N  14  
OS2  C9     C4     SING  Y  N  15  
OS2  "O3'"  "C3'"  SING  N  N  16  
OS2  "C3'"  "C2'"  SING  N  N  17  
OS2  C5     C4     DOUB  Y  N  18  
OS2  C5     C6     SING  Y  N  19  
OS2  N6     C6     SING  N  N  20  
OS2  C4     N3     SING  Y  N  21  
OS2  C6     N1     DOUB  Y  N  22  
OS2  N3     C2     DOUB  Y  N  23  
OS2  N1     C2     SING  Y  N  24  
OS2  "O3'"  H1     SING  N  N  25  
OS2  "C3'"  H2     SING  N  N  26  
OS2  "C2'"  H3     SING  N  N  27  
OS2  "C2'"  H4     SING  N  N  28  
OS2  "C1'"  H6     SING  N  N  29  
OS2  "C1'"  H7     SING  N  N  30  
OS2  "C4'"  H8     SING  N  N  31  
OS2  "C5'"  H9     SING  N  N  32  
OS2  "C5'"  H10    SING  N  N  33  
OS2  C20    H11    SING  N  N  34  
OS2  C20    H12    SING  N  N  35  
OS2  C22    H13    SING  N  N  36  
OS2  C10    H14    SING  N  N  37  
OS2  C10    H15    SING  N  N  38  
OS2  C8     H16    SING  N  N  39  
OS2  N7     H17    SING  N  N  40  
OS2  N6     H18    SING  N  N  41  
OS2  N6     H19    SING  N  N  42  
OS2  C2     H20    SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OS2  SMILES            ACDLabs               12.01  "OC3CN(Cc2c1ncnc(c1nc2)N)CC3CSCC#C"  
OS2  InChI             InChI                 1.03   "InChI=1S/C15H19N5OS/c1-2-3-22-8-11-6-20(7-12(11)21)5-10-4-17-14-13(10)18-9-19-15(14)16/h1,4,9,11-12,17,21H,3,5-8H2,(H2,16,18,19)/t11-,12+/m1/s1"  
OS2  InChIKey          InChI                 1.03   MQJBNGGMAUMWEV-NEPJUHHUSA-N  
OS2  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2c(CN3C[C@H](O)[C@@H](CSCC#C)C3)c[nH]c12"  
OS2  SMILES            CACTVS                3.385  "Nc1ncnc2c(CN3C[CH](O)[CH](CSCC#C)C3)c[nH]c12"  
OS2  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C#CCSC[C@H]1CN(C[C@@H]1O)Cc2c[nH]c3c2ncnc3N"  
OS2  SMILES            "OpenEye OEToolkits"  2.0.6  "C#CCSCC1CN(CC1O)Cc2c[nH]c3c2ncnc3N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OS2  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(prop-2-yn-1-yl)sulfanyl]methyl}pyrrolidin-3-ol"  
OS2  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{R},4~{S})-1-[(4-azanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-(prop-2-ynylsulfanylmethyl)pyrrolidin-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OS2  "Create component"  2018-07-03  RCSB  
OS2  "Initial release"   2019-03-20  RCSB  
##
