data_RY2
# 
_chem_comp.id                                    RY2 
_chem_comp.name                                  "(3-(1H-tetrazol-5-yl)phenyl)boronic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H7 B N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[3-(2H-1,2,3,4-tetrazol-5-yl)phenyl]boronic acid; 3-(1H-Tetrazol-5-yl)phenylboronic Acid; 3-(2H-Tetrazol-5-yl)-phenyl-boronic acid; 3-(TETRAZOL-5-YL)PHENYLBORONIC ACID; Boronic acid,B-[3-(2H-tetrazol-5-yl)phenyl]-" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-10-31 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        189.967 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RY2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ATM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RY2 C1 C1 C 0 1 Y N N N N N -4.842 3.190 18.435 -2.004 1.565  -0.003 C1 RY2 1  
RY2 N1 N1 N 0 1 Y N N N N N -0.770 3.102 13.580 4.051  -0.170 0.002  N1 RY2 2  
RY2 C2 C2 C 0 1 Y N N N N N -4.933 2.088 17.591 -0.917 2.415  -0.002 C2 RY2 3  
RY2 N2 N2 N 0 1 Y N N N N N -1.721 2.477 12.952 3.586  -1.370 0.001  N2 RY2 4  
RY2 C3 C3 C 0 1 Y N N N N N -4.128 2.002 16.473 0.367  1.903  -0.001 C3 RY2 5  
RY2 C4 C4 C 0 1 Y N N N N N -3.187 2.986 16.208 0.570  0.524  -0.002 C4 RY2 6  
RY2 C5 C5 C 0 1 Y N N N N N -2.398 2.971 14.973 1.950  -0.024 -0.000 C5 RY2 7  
RY2 C6 C6 C 0 1 Y N N N N N -3.119 4.097 17.067 -0.522 -0.337 -0.003 C6 RY2 8  
RY2 B  B1 B 0 1 N N N N N N -3.977 5.606 19.053 -3.050 -0.782 0.002  B  RY2 9  
RY2 C  C7 C 0 1 Y N N N N N -3.962 4.247 18.182 -1.813 0.184  0.002  C  RY2 10 
RY2 N3 N3 N 0 1 Y N N N N N -2.733 2.360 13.833 2.297  -1.319 -0.001 N3 RY2 11 
RY2 N  N4 N 0 1 Y N N N N N -1.157 3.417 14.842 3.072  0.668  0.002  N  RY2 12 
RY2 H1 H1 H 0 1 N N N N N N -5.470 3.231 19.313 -3.005 1.970  -0.004 H1 RY2 13 
RY2 H2 H2 H 0 1 N N N N N N 0.123  3.321 13.187 4.992  0.067  0.007  H2 RY2 14 
RY2 H3 H3 H 0 1 N N N N N N -5.635 1.298 17.811 -1.069 3.484  -0.002 H3 RY2 15 
RY2 H4 H4 H 0 1 N N N N N N -4.231 1.163 15.800 1.214  2.573  0.000  H4 RY2 16 
RY2 H5 H5 H 0 1 N N N N N N -2.389 4.866 16.862 -0.369 -1.406 -0.004 H5 RY2 17 
RY2 O2 O2 O 0 1 N N N N N N -3.263 6.421 18.821 -2.854 -2.188 -0.004 O2 RY2 18 
RY2 O1 O1 O 0 1 N N N N N N -4.701 5.724 19.883 -4.367 -0.249 0.007  O1 RY2 19 
RY2 H6 H6 H 0 1 N N N N N N -3.402 7.144 19.421 -1.924 -2.456 -0.008 H6 RY2 20 
RY2 H7 H7 H 0 1 N N N N N N -4.580 6.573 20.291 -5.063 -0.920 0.006  H7 RY2 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RY2 N2 N1 SING Y N 1  
RY2 N2 N3 DOUB Y N 2  
RY2 N1 N  SING Y N 3  
RY2 N3 C5 SING Y N 4  
RY2 N  C5 DOUB Y N 5  
RY2 C5 C4 SING N N 6  
RY2 C4 C3 DOUB Y N 7  
RY2 C4 C6 SING Y N 8  
RY2 C3 C2 SING Y N 9  
RY2 C6 C  DOUB Y N 10 
RY2 C2 C1 DOUB Y N 11 
RY2 C  C1 SING Y N 12 
RY2 C  B  SING N N 13 
RY2 C1 H1 SING N N 14 
RY2 N1 H2 SING N N 15 
RY2 C2 H3 SING N N 16 
RY2 C3 H4 SING N N 17 
RY2 C6 H5 SING N N 18 
RY2 B  O2 SING N N 19 
RY2 B  O1 SING N N 20 
RY2 O2 H6 SING N N 21 
RY2 O1 H7 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RY2 InChI            InChI                1.03  "InChI=1S/C7H7BN4O2/c13-8(14)6-3-1-2-5(4-6)7-9-11-12-10-7/h1-4,13-14H,(H,9,10,11,12)" 
RY2 InChIKey         InChI                1.03  XMJKBDSKRITXBW-UHFFFAOYSA-N                                                           
RY2 SMILES_CANONICAL CACTVS               3.385 "OB(O)c1cccc(c1)c2n[nH]nn2"                                                           
RY2 SMILES           CACTVS               3.385 "OB(O)c1cccc(c1)c2n[nH]nn2"                                                           
RY2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(c1cccc(c1)c2n[nH]nn2)(O)O"                                                         
RY2 SMILES           "OpenEye OEToolkits" 2.0.7 "B(c1cccc(c1)c2n[nH]nn2)(O)O"                                                         
# 
_pdbx_chem_comp_identifier.comp_id           RY2 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[3-(2~{H}-1,2,3,4-tetrazol-5-yl)phenyl]boronic acid" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 RY2 "[3-(2H-1,2,3,4-tetrazol-5-yl)phenyl]boronic acid" PDB     ? 
2 RY2 "(3-(1H-tetrazol-5-yl)phenyl)boronic acid"         AUTHOR  ? 
3 RY2 "3-(1H-Tetrazol-5-yl)phenylboronic Acid"           PUBCHEM ? 
4 RY2 "3-(2H-Tetrazol-5-yl)-phenyl-boronic acid"         PUBCHEM ? 
5 RY2 "3-(TETRAZOL-5-YL)PHENYLBORONIC ACID"              PUBCHEM ? 
6 RY2 "Boronic acid,B-[3-(2H-tetrazol-5-yl)phenyl]-"     PUBCHEM ? 
7 RY2 46737996                                           PUBCHEM ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RY2 "Create component" 2020-10-31 PDBE 
RY2 "Initial release"  2021-08-11 RCSB 
RY2 "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 RY2 LYS None "Covalent chemical modification" "Amino-acid side chain" "Any position" B NZ ? ? 
2 RY2 SER None "Covalent chemical modification" "Amino-acid side chain" "Any position" B OG ? ? 
# 
