data_VF2
# 
_chem_comp.id                                    VF2 
_chem_comp.name                                  "4-[(E)-2-[1-(7-chloranylheptyl)pyridin-1-ium-4-yl]ethenyl]-N,N-dimethyl-aniline" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H30 Cl N2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2021-05-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        357.940 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VF2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7OIR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VF2 C10 C1  C  0 1 Y N N N N N 16.194 -26.508 7.565  1.372   1.074  0.179  C10 VF2 1  
VF2 C15 C2  C  0 1 N N N N N N 17.795 -22.310 9.416  -3.541  0.801  -0.097 C15 VF2 2  
VF2 C17 C3  C  0 1 N N N N N N 17.554 -19.816 9.898  -5.881  -0.065 0.038  C17 VF2 3  
VF2 C20 C4  C  0 1 N N N N N N 17.065 -16.837 10.826 -9.694  -0.591 -0.062 C20 VF2 4  
VF2 C22 C5  C  0 1 Y N N N N N 16.125 -25.072 9.538  -0.732  1.930  0.941  C22 VF2 5  
VF2 C24 C6  C  0 1 Y N N N N N 16.469 -29.981 4.079  5.696   -0.699 -1.383 C24 VF2 6  
VF2 C01 C7  C  0 1 N N N N N N 12.702 -32.695 2.288  9.550   -0.831 1.599  C01 VF2 7  
VF2 N02 N1  N  0 1 N N N N N N 14.116 -32.338 2.338  8.938   -1.089 0.293  N02 VF2 8  
VF2 C03 C8  C  0 1 N N N N N N 15.035 -32.962 1.379  9.734   -1.681 -0.785 C03 VF2 9  
VF2 C04 C9  C  0 1 Y N N N N N 14.605 -31.301 3.282  7.598   -0.770 0.076  C04 VF2 10 
VF2 C05 C10 C  0 1 Y N N N N N 13.728 -30.576 4.121  6.844   -0.207 1.102  C05 VF2 11 
VF2 C06 C11 C  0 1 Y N N N N N 14.213 -29.584 4.965  5.522   0.114  0.890  C06 VF2 12 
VF2 C07 C12 C  0 1 Y N N N N N 15.599 -29.289 4.921  4.935   -0.134 -0.355 C07 VF2 13 
VF2 C08 C13 C  0 1 N N N N N N 16.228 -28.207 5.811  3.518   0.198  -0.583 C08 VF2 14 
VF2 C09 C14 C  0 1 N N N N N N 15.439 -27.527 6.679  2.788   0.741  0.406  C09 VF2 15 
VF2 C11 C15 C  0 1 Y N N N N N 17.523 -26.035 7.356  0.763   0.827  -1.060 C11 VF2 16 
VF2 C12 C16 C  0 1 Y N N N N N 18.070 -25.121 8.276  -0.567  1.149  -1.227 C12 VF2 17 
VF2 N13 N2  N  1 1 Y N N N N N 17.358 -24.663 9.297  -1.264  1.681  -0.241 N13 VF2 18 
VF2 C14 C17 C  0 1 N N N N N N 17.994 -23.662 10.163 -2.675  2.007  -0.465 C14 VF2 19 
VF2 C16 C18 C  0 1 N N N N N N 18.106 -21.149 10.369 -5.015  1.141  -0.331 C16 VF2 20 
VF2 C18 C19 C  0 1 N N N N N N 18.575 -18.812 10.497 -7.354  0.275  -0.197 C18 VF2 21 
VF2 C19 C20 C  0 1 N N N N N N 18.307 -17.347 10.110 -8.221  -0.931 0.172  C19 VF2 22 
VF2 C23 C21 C  0 1 Y N N N N N 15.492 -26.022 8.721  0.592   1.640  1.196  C23 VF2 23 
VF2 C25 C22 C  0 1 Y N N N N N 15.981 -30.993 3.256  7.019   -1.013 -1.165 C25 VF2 24 
VF2 CL1 CL1 CL 0 0 N N N N N N 16.528 -16.099 9.772  -10.715 -2.012 0.372  CL1 VF2 25 
VF2 H1  H1  H  0 1 N N N N N N 18.473 -22.266 8.551  -3.262  -0.051 -0.717 H1  VF2 26 
VF2 H2  H2  H  0 1 N N N N N N 16.754 -22.232 9.070  -3.389  0.552  0.953  H2  VF2 27 
VF2 H3  H3  H  0 1 N N N N N N 17.534 -19.758 8.800  -5.601  -0.917 -0.582 H3  VF2 28 
VF2 H4  H4  H  0 1 N N N N N N 16.543 -19.641 10.293 -5.728  -0.315 1.088  H4  VF2 29 
VF2 H5  H5  H  0 1 N N N N N N 16.401 -17.655 11.144 -9.974  0.260  0.558  H5  VF2 30 
VF2 H6  H6  H  0 1 N N N N N N 17.312 -16.207 11.693 -9.847  -0.342 -1.112 H6  VF2 31 
VF2 H7  H7  H  0 1 N N N N N N 15.591 -24.666 10.384 -1.341  2.367  1.718  H7  VF2 32 
VF2 H8  H8  H  0 1 N N N N N N 17.520 -29.732 4.065  5.246   -0.893 -2.345 H8  VF2 33 
VF2 H9  H9  H  0 1 N N N N N N 12.156 -32.143 3.067  9.428   -1.707 2.237  H9  VF2 34 
VF2 H10 H10 H  0 1 N N N N N N 12.293 -32.435 1.300  10.612  -0.623 1.468  H10 VF2 35 
VF2 H11 H11 H  0 1 N N N N N N 12.591 -33.776 2.458  9.066   0.027  2.065  H11 VF2 36 
VF2 H12 H12 H  0 1 N N N N N N 16.055 -32.587 1.551  9.657   -2.767 -0.738 H12 VF2 37 
VF2 H13 H13 H  0 1 N N N N N N 15.018 -34.054 1.512  9.360   -1.331 -1.747 H13 VF2 38 
VF2 H14 H14 H  0 1 N N N N N N 14.721 -32.713 0.355  10.777  -1.385 -0.671 H14 VF2 39 
VF2 H15 H15 H  0 1 N N N N N N 12.671 -30.795 4.106  7.297   -0.019 2.063  H15 VF2 40 
VF2 H16 H16 H  0 1 N N N N N N 13.553 -29.053 5.635  4.937   0.551  1.686  H16 VF2 41 
VF2 H17 H17 H  0 1 N N N N N N 17.284 -27.991 5.746  3.066   0.006  -1.544 H17 VF2 42 
VF2 H18 H18 H  0 1 N N N N N N 14.373 -27.684 6.746  3.240   0.933  1.368  H18 VF2 43 
VF2 H19 H19 H  0 1 N N N N N N 18.099 -26.372 6.507  1.328   0.391  -1.872 H19 VF2 44 
VF2 H20 H20 H  0 1 N N N N N N 19.089 -24.786 8.148  -1.044  0.963  -2.177 H20 VF2 45 
VF2 H21 H21 H  0 1 N N N N N N 17.507 -23.636 11.149 -2.828  2.256  -1.516 H21 VF2 46 
VF2 H22 H22 H  0 1 N N N N N N 19.064 -23.882 10.289 -2.954  2.859  0.155  H22 VF2 47 
VF2 H23 H23 H  0 1 N N N N N N 17.670 -21.379 11.352 -5.294  1.992  0.289  H23 VF2 48 
VF2 H24 H24 H  0 1 N N N N N N 19.198 -21.060 10.464 -5.167  1.390  -1.381 H24 VF2 49 
VF2 H25 H25 H  0 1 N N N N N N 18.539 -18.893 11.593 -7.634  1.126  0.423  H25 VF2 50 
VF2 H26 H26 H  0 1 N N N N N N 19.580 -19.086 10.142 -7.507  0.524  -1.247 H26 VF2 51 
VF2 H27 H27 H  0 1 N N N N N N 19.172 -16.731 10.397 -8.068  -1.181 1.222  H27 VF2 52 
VF2 H28 H28 H  0 1 N N N N N N 18.154 -17.280 9.023  -7.941  -1.783 -0.448 H28 VF2 53 
VF2 H29 H29 H  0 1 N N N N N N 14.500 -26.379 8.956  1.020   1.842  2.167  H29 VF2 54 
VF2 H30 H30 H  0 1 N N N N N N 16.649 -31.536 2.605  7.608   -1.450 -1.958 H30 VF2 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VF2 C03 N02 SING N N 1  
VF2 C01 N02 SING N N 2  
VF2 N02 C04 SING N N 3  
VF2 C25 C04 DOUB Y N 4  
VF2 C25 C24 SING Y N 5  
VF2 C04 C05 SING Y N 6  
VF2 C24 C07 DOUB Y N 7  
VF2 C05 C06 DOUB Y N 8  
VF2 C07 C06 SING Y N 9  
VF2 C07 C08 SING N N 10 
VF2 C08 C09 DOUB N E 11 
VF2 C09 C10 SING N N 12 
VF2 C11 C10 DOUB Y N 13 
VF2 C11 C12 SING Y N 14 
VF2 C10 C23 SING Y N 15 
VF2 C12 N13 DOUB Y N 16 
VF2 C23 C22 DOUB Y N 17 
VF2 N13 C22 SING Y N 18 
VF2 N13 C14 SING N N 19 
VF2 C15 C14 SING N N 20 
VF2 C15 C16 SING N N 21 
VF2 C17 C16 SING N N 22 
VF2 C17 C18 SING N N 23 
VF2 C19 C18 SING N N 24 
VF2 C19 C20 SING N N 25 
VF2 C20 CL1 SING N N 26 
VF2 C15 H1  SING N N 27 
VF2 C15 H2  SING N N 28 
VF2 C17 H3  SING N N 29 
VF2 C17 H4  SING N N 30 
VF2 C20 H5  SING N N 31 
VF2 C20 H6  SING N N 32 
VF2 C22 H7  SING N N 33 
VF2 C24 H8  SING N N 34 
VF2 C01 H9  SING N N 35 
VF2 C01 H10 SING N N 36 
VF2 C01 H11 SING N N 37 
VF2 C03 H12 SING N N 38 
VF2 C03 H13 SING N N 39 
VF2 C03 H14 SING N N 40 
VF2 C05 H15 SING N N 41 
VF2 C06 H16 SING N N 42 
VF2 C08 H17 SING N N 43 
VF2 C09 H18 SING N N 44 
VF2 C11 H19 SING N N 45 
VF2 C12 H20 SING N N 46 
VF2 C14 H21 SING N N 47 
VF2 C14 H22 SING N N 48 
VF2 C16 H23 SING N N 49 
VF2 C16 H24 SING N N 50 
VF2 C18 H25 SING N N 51 
VF2 C18 H26 SING N N 52 
VF2 C19 H27 SING N N 53 
VF2 C19 H28 SING N N 54 
VF2 C23 H29 SING N N 55 
VF2 C25 H30 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VF2 InChI            InChI                1.03  "InChI=1S/C22H30ClN2/c1-24(2)22-12-10-20(11-13-22)8-9-21-14-18-25(19-15-21)17-7-5-3-4-6-16-23/h8-15,18-19H,3-7,16-17H2,1-2H3/q+1" 
VF2 InChIKey         InChI                1.03  WTHMXSWCQZGWBE-UHFFFAOYSA-N                                                                                                       
VF2 SMILES_CANONICAL CACTVS               3.385 "CN(C)c1ccc(\C=C\c2cc[n+](CCCCCCCCl)cc2)cc1"                                                                                      
VF2 SMILES           CACTVS               3.385 "CN(C)c1ccc(C=Cc2cc[n+](CCCCCCCCl)cc2)cc1"                                                                                        
VF2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(cc1)/C=C/c2cc[n+](cc2)CCCCCCCCl"                                                                                      
VF2 SMILES           "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(cc1)C=Cc2cc[n+](cc2)CCCCCCCCl"                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           VF2 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-[(~{E})-2-[1-(7-chloranylheptyl)pyridin-1-ium-4-yl]ethenyl]-~{N},~{N}-dimethyl-aniline" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VF2 "Create component" 2021-05-12 PDBE 
VF2 "Modify formula"   2021-05-13 PDBE 
VF2 "Initial release"  2021-07-21 RCSB 
VF2 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VF2 
_pdbx_chem_comp_pcm.modified_residue_id                ASP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OD1 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
