data_WS2
# 
_chem_comp.id                                    WS2 
_chem_comp.name                                  "6-(1-beta-D-Galactopyranosyloxymethyl)-N-(5'-deoxyluridine-5'-yl)picolinamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H28 N4 O12" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-08-16 
_chem_comp.pdbx_modified_date                    2015-02-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        540.477 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WS2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WS2 O4    O4    O 0 1 N N N -6.016 -4.476 2.491  -6.016 -4.476 2.491  O4    WS2 1  
WS2 C4    C4    C 0 1 N N N -5.720 -3.555 1.752  -5.720 -3.555 1.752  C4    WS2 2  
WS2 N3    N3    N 0 1 N N N -5.321 -3.798 0.487  -5.321 -3.798 0.487  N3    WS2 3  
WS2 C2    C2    C 0 1 N N N -4.995 -2.779 -0.329 -4.995 -2.779 -0.329 C2    WS2 4  
WS2 O2    O2    O 0 1 N N N -4.637 -3.013 -1.467 -4.637 -3.013 -1.467 O2    WS2 5  
WS2 C5    C5    C 0 1 N N N -5.797 -2.217 2.211  -5.797 -2.217 2.211  C5    WS2 6  
WS2 C6    C6    C 0 1 N N N -5.463 -1.214 1.371  -5.463 -1.214 1.371  C6    WS2 7  
WS2 N1    N1    N 0 1 N N N -5.058 -1.504 0.097  -5.058 -1.504 0.097  N1    WS2 8  
WS2 "C1'" "C1'" C 0 1 N N R -4.696 -0.415 -0.814 -4.696 -0.415 -0.814 "C1'" WS2 9  
WS2 "O4'" "O4'" O 0 1 N N N -3.721 0.453  -0.198 -3.721 0.453  -0.198 "O4'" WS2 10 
WS2 "C2'" "C2'" C 0 1 N N R -5.919 0.489  -1.085 -5.919 0.489  -1.085 "C2'" WS2 11 
WS2 "O2'" "O2'" O 0 1 N N N -6.536 0.140  -2.326 -6.536 0.140  -2.326 "O2'" WS2 12 
WS2 "C3'" "C3'" C 0 1 N N S -5.324 1.913  -1.157 -5.324 1.913  -1.157 "C3'" WS2 13 
WS2 "O3'" "O3'" O 0 1 N N N -5.558 2.488  -2.444 -5.558 2.488  -2.444 "O3'" WS2 14 
WS2 "C4'" "C4'" C 0 1 N N R -3.810 1.700  -0.922 -3.810 1.700  -0.922 "C4'" WS2 15 
WS2 "C5'" "C5'" C 0 1 N N N -3.234 2.844  -0.086 -3.234 2.844  -0.086 "C5'" WS2 16 
WS2 N11   N11   N 0 1 N N N -1.782 2.687  0.024  -1.782 2.687  0.024  N11   WS2 17 
WS2 C12   C12   C 0 1 N N N -1.057 3.585  0.720  -1.057 3.585  0.720  C12   WS2 18 
WS2 O13   O13   O 0 1 N N N -1.608 4.525  1.256  -1.608 4.525  1.256  O13   WS2 19 
WS2 C14   C14   C 0 1 Y N N 0.412  3.425  0.831  0.412  3.425  0.831  C14   WS2 20 
WS2 C15   C15   C 0 1 Y N N 1.155  4.357  1.552  1.155  4.357  1.552  C15   WS2 21 
WS2 C16   C16   C 0 1 Y N N 2.528  4.194  1.647  2.528  4.194  1.647  C16   WS2 22 
WS2 C17   C17   C 0 1 Y N N 3.110  3.104  1.018  3.110  3.104  1.018  C17   WS2 23 
WS2 C18   C18   C 0 1 Y N N 2.309  2.217  0.317  2.309  2.217  0.317  C18   WS2 24 
WS2 N19   N19   N 0 1 Y N N 1.008  2.392  0.247  1.008  2.392  0.247  N19   WS2 25 
WS2 C20   C20   C 0 1 N N N 2.937  1.031  -0.368 2.937  1.031  -0.368 C20   WS2 26 
WS2 "O1'" "O1'" O 0 1 N N N 4.349  1.046  -0.150 4.349  1.046  -0.150 "O1'" WS2 27 
WS2 H1    H1    H 0 1 N N N -5.267 -4.739 0.154  -5.270 -4.711 0.164  H1    WS2 28 
WS2 H2    H2    H 0 1 N N N -6.119 -2.002 3.219  -6.118 -2.003 3.220  H2    WS2 29 
WS2 H3    H3    H 0 1 N N N -5.515 -0.188 1.703  -5.515 -0.188 1.704  H3    WS2 30 
WS2 H4    H4    H 0 1 N N N -4.318 -0.816 -1.766 -4.308 -0.818 -1.750 H4    WS2 31 
WS2 H5    H5    H 0 1 N N N -6.628 0.421  -0.247 -6.636 0.415  -0.267 H5    WS2 32 
WS2 H6    H6    H 0 1 N N N -6.896 -0.737 -2.265 -7.273 0.715  -2.574 H6    WS2 33 
WS2 H7    H7    H 0 1 N N N -5.744 2.535  -0.353 -5.748 2.544  -0.375 H7    WS2 34 
WS2 H8    H8    H 0 1 N N N -5.187 3.362  -2.473 -6.494 2.588  -2.667 H8    WS2 35 
WS2 H9    H9    H 0 1 N N N -3.288 1.639  -1.888 -3.285 1.625  -1.875 H9    WS2 36 
WS2 H10   H10   H 0 1 N N N -3.463 3.804  -0.572 -3.461 3.796  -0.568 H10   WS2 37 
WS2 H11   H11   H 0 1 N N N -3.682 2.825  0.919  -3.678 2.826  0.909  H11   WS2 38 
WS2 H12   H12   H 0 1 N N N -1.328 1.913  -0.418 -1.342 1.936  -0.405 H12   WS2 39 
WS2 H13   H13   H 0 1 N N N 0.668  5.194  2.030  0.669  5.194  2.029  H13   WS2 40 
WS2 H14   H14   H 0 1 N N N 3.131  4.900  2.199  3.131  4.900  2.199  H14   WS2 41 
WS2 H15   H15   H 0 1 N N N 4.177  2.948  1.074  4.177  2.949  1.072  H15   WS2 42 
WS2 H16   H16   H 0 1 N N N 2.732  1.081  -1.448 2.517  0.111  0.039  H16   WS2 43 
WS2 H17   H17   H 0 1 N N N 2.513  0.103  0.043  2.734  1.080  -1.438 H17   WS2 44 
WS2 C11   C11   C 0 1 N N R 5.044  -0.042 -0.762 5.044  -0.042 -0.762 C11   WS2 45 
WS2 C22   C22   C 0 1 N N S 6.552  0.143  -0.570 6.552  0.143  -0.570 C22   WS2 46 
WS2 C33   C33   C 0 1 N N S 7.286  -1.057 -1.175 7.286  -1.057 -1.175 C33   WS2 47 
WS2 C44   C44   C 0 1 N N R 6.770  -2.342 -0.519 6.770  -2.342 -0.519 C44   WS2 48 
WS2 C55   C55   C 0 1 N N R 5.254  -2.431 -0.713 5.254  -2.431 -0.713 C55   WS2 49 
WS2 O66   O66   O 0 1 N N N 4.635  -1.270 -0.155 4.635  -1.270 -0.155 O66   WS2 50 
WS2 H18   H18   H 0 1 N N N 4.828  -0.066 -1.840 4.814  -0.068 -1.827 H18   WS2 51 
WS2 H19   H19   H 0 1 N N N 6.871  1.059  -1.089 6.873  1.057  -1.069 H19   WS2 52 
WS2 H21   H21   H 0 1 N N N 7.081  -1.097 -2.255 7.100  -1.095 -2.248 H21   WS2 53 
WS2 H23   H23   H 0 1 N N N 7.246  -3.208 -1.003 7.248  -3.205 -0.983 H23   WS2 54 
WS2 H25   H25   H 0 1 N N N 5.034  -2.504 -1.788 5.026  -2.488 -1.778 H25   WS2 55 
WS2 C77   C77   C 0 1 N N N 4.722  -3.681 -0.009 4.722  -3.681 -0.009 C77   WS2 56 
WS2 O70   O70   O 0 1 N N N 3.328  -3.826 -0.287 3.328  -3.826 -0.287 O70   WS2 57 
WS2 H26   H26   H 0 1 N N N 5.263  -4.566 -0.375 5.259  -4.557 -0.371 H26   WS2 58 
WS2 H27   H27   H 0 1 N N N 4.871  -3.582 1.076  4.870  -3.583 1.066  H27   WS2 59 
WS2 H28   H28   H 0 1 N N N 2.997  -4.602 0.150  2.923  -4.600 0.128  H28   WS2 60 
WS2 O71   O71   O 0 1 N N N 7.073  -2.320 0.877  7.073  -2.320 0.877  O71   WS2 61 
WS2 O72   O72   O 0 1 N N N 8.689  -0.929 -0.936 8.689  -0.929 -0.936 O72   WS2 62 
WS2 O73   O73   O 0 1 N N N 6.848  0.230  0.825  6.848  0.230  0.825  O73   WS2 63 
WS2 H20   H20   H 0 1 N N N 6.753  -3.117 1.284  8.017  -2.260 1.074  H20   WS2 64 
WS2 H22   H22   H 0 1 N N N 9.144  -1.674 -1.312 9.082  -0.132 -1.318 H22   WS2 65 
WS2 H24   H24   H 0 1 N N N 7.783  0.345  0.944  6.412  0.967  1.275  H24   WS2 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WS2 "O2'" "C2'" SING N N 1  
WS2 "O3'" "C3'" SING N N 2  
WS2 "C2'" "C3'" SING N N 3  
WS2 "C2'" "C1'" SING N N 4  
WS2 "C4'" "C3'" SING N N 5  
WS2 "C4'" "C5'" SING N N 6  
WS2 "C4'" "O4'" SING N N 7  
WS2 "C5'" N11   SING N N 8  
WS2 O13   C12   DOUB N N 9  
WS2 "O4'" "C1'" SING N N 10 
WS2 "C1'" N1    SING N N 11 
WS2 O2    C2    DOUB N N 12 
WS2 C12   N11   SING N N 13 
WS2 C12   C14   SING N N 14 
WS2 "O1'" C20   SING N N 15 
WS2 N1    C2    SING N N 16 
WS2 N1    C6    SING N N 17 
WS2 C2    N3    SING N N 18 
WS2 N19   C14   DOUB Y N 19 
WS2 N19   C18   SING Y N 20 
WS2 C14   C15   SING Y N 21 
WS2 C6    C5    DOUB N N 22 
WS2 C20   C18   SING N N 23 
WS2 N3    C4    SING N N 24 
WS2 C18   C17   DOUB Y N 25 
WS2 C15   C16   DOUB Y N 26 
WS2 C5    C4    SING N N 27 
WS2 C4    O4    DOUB N N 28 
WS2 C17   C16   SING Y N 29 
WS2 N3    H1    SING N N 30 
WS2 C5    H2    SING N N 31 
WS2 C6    H3    SING N N 32 
WS2 "C1'" H4    SING N N 33 
WS2 "C2'" H5    SING N N 34 
WS2 "O2'" H6    SING N N 35 
WS2 "C3'" H7    SING N N 36 
WS2 "O3'" H8    SING N N 37 
WS2 "C4'" H9    SING N N 38 
WS2 "C5'" H10   SING N N 39 
WS2 "C5'" H11   SING N N 40 
WS2 N11   H12   SING N N 41 
WS2 C15   H13   SING N N 42 
WS2 C16   H14   SING N N 43 
WS2 C17   H15   SING N N 44 
WS2 C20   H16   SING N N 45 
WS2 C20   H17   SING N N 46 
WS2 "O1'" C11   SING N N 47 
WS2 C11   C22   SING N N 48 
WS2 C22   C33   SING N N 49 
WS2 C33   C44   SING N N 50 
WS2 C44   C55   SING N N 51 
WS2 C55   O66   SING N N 52 
WS2 O66   C11   SING N N 53 
WS2 C11   H18   SING N N 54 
WS2 C22   H19   SING N N 55 
WS2 C33   H21   SING N N 56 
WS2 C44   H23   SING N N 57 
WS2 C55   H25   SING N N 58 
WS2 C55   C77   SING N N 59 
WS2 C77   O70   SING N N 60 
WS2 C77   H26   SING N N 61 
WS2 C77   H27   SING N N 62 
WS2 O70   H28   SING N N 63 
WS2 C44   O71   SING N N 64 
WS2 C33   O72   SING N N 65 
WS2 C22   O73   SING N N 66 
WS2 O71   H20   SING N N 67 
WS2 O72   H22   SING N N 68 
WS2 O73   H24   SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WS2 SMILES           ACDLabs              12.01 "O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)CNC(=O)c3nc(ccc3)COC4OC(C(O)C(O)C4O)CO" 
WS2 InChI            InChI                1.03  
"InChI=1S/C22H28N4O12/c27-7-12-15(30)16(31)18(33)21(38-12)36-8-9-2-1-3-10(24-9)19(34)23-6-11-14(29)17(32)20(37-11)26-5-4-13(28)25-22(26)35/h1-5,11-12,14-18,20-21,27,29-33H,6-8H2,(H,23,34)(H,25,28,35)/t11-,12-,14-,15+,16+,17-,18+,20-,21-/m1/s1" 
WS2 InChIKey         InChI                1.03  KPOTWZYLDCHCIG-GBMKPDNQSA-N 
WS2 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H](OCc2cccc(n2)C(=O)NC[C@H]3O[C@H]([C@H](O)[C@@H]3O)N4C=CC(=O)NC4=O)[C@@H](O)[C@@H](O)[C@H]1O" 
WS2 SMILES           CACTVS               3.385 "OC[CH]1O[CH](OCc2cccc(n2)C(=O)NC[CH]3O[CH]([CH](O)[CH]3O)N4C=CC(=O)NC4=O)[CH](O)[CH](O)[CH]1O" 
WS2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(nc(c1)C(=O)NC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)O)CO[C@H]4[C@H]([C@H]([C@H]([C@H](O4)CO)O)O)O" 
WS2 SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(nc(c1)C(=O)NCC2C(C(C(O2)N3C=CC(=O)NC3=O)O)O)COC4C(C(C(C(O4)CO)O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WS2 "SYSTEMATIC NAME" ACDLabs              12.01 "5'-deoxy-5'-[({6-[(beta-D-talopyranosyloxy)methyl]pyridin-2-yl}carbonyl)amino]uridine"                                                                                                                 
WS2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-6-[[(2R,3S,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]pyridine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WS2 "Create component"   2013-08-16 RCSB 
WS2 "Other modification" 2013-08-29 RCSB 
WS2 "Initial release"    2013-09-11 RCSB 
WS2 "Other modification" 2015-02-25 RCSB 
# 
