data_YA2
# 
_chem_comp.id                                    YA2 
_chem_comp.name                                  "(1R,3R,7E,17beta)-17-[(2R,3R)-3-butyl-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H54 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-05-02 
_chem_comp.pdbx_modified_date                    2014-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        486.769 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YA2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WT7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YA2 O31 O31 O 0 1 N N N 2.166  -0.610 59.218 4.512  -0.714 2.469  O31 YA2 1  
YA2 C26 C26 C 0 1 N N N 2.642  0.133  58.125 5.425  -0.843 1.377  C26 YA2 2  
YA2 C29 C29 C 0 1 N N N 2.890  -0.900 57.022 6.386  0.347  1.373  C29 YA2 3  
YA2 C30 C30 C 0 1 N N N 1.627  -1.602 56.591 7.345  0.225  0.186  C30 YA2 4  
YA2 C27 C27 C 0 1 N N N 1.520  1.149  57.786 6.221  -2.141 1.528  C27 YA2 5  
YA2 C28 C28 C 0 1 N N N 1.851  1.907  56.517 6.984  -2.120 2.854  C28 YA2 6  
YA2 C25 C25 C 0 1 N N N 4.000  0.788  58.493 4.645  -0.873 0.061  C25 YA2 7  
YA2 C20 C20 C 0 1 N N R 3.835  1.793  59.635 3.781  0.385  -0.048 C20 YA2 8  
YA2 C21 C21 C 0 1 N N N 4.622  1.322  60.881 4.614  1.527  -0.633 C21 YA2 9  
YA2 C22 C22 C 0 1 N N N 4.021  1.957  62.123 3.784  2.812  -0.642 C22 YA2 10 
YA2 C23 C23 C 0 1 N N N 4.794  1.504  63.363 4.580  3.929  -1.320 C23 YA2 11 
YA2 C24 C24 C 0 1 N N N 4.270  2.226  64.584 3.749  5.214  -1.329 C24 YA2 12 
YA2 C18 C18 C 0 1 N N R 4.115  3.231  59.169 2.586  0.105  -0.962 C18 YA2 13 
YA2 C19 C19 C 0 1 N N N 2.980  4.085  59.670 3.086  -0.432 -2.305 C19 YA2 14 
YA2 C17 C17 C 0 1 N N R 5.514  3.746  59.551 1.674  -0.933 -0.306 C17 YA2 15 
YA2 C16 C16 C 0 1 N N N 6.635  2.921  58.860 1.205  -0.434 1.086  C16 YA2 16 
YA2 C15 C15 C 0 1 N N N 7.772  3.901  58.509 -0.350 -0.435 1.048  C15 YA2 17 
YA2 C13 C13 C 0 1 N N R 5.836  5.200  59.179 0.399  -1.104 -1.117 C13 YA2 18 
YA2 C14 C14 C 0 1 N N S 7.351  5.219  59.221 -0.661 -1.467 -0.038 C14 YA2 19 
YA2 C35 C35 C 0 1 N N N 5.315  5.506  57.741 0.027  0.234  -1.758 C35 YA2 20 
YA2 C12 C12 C 0 1 N N N 5.385  6.263  60.138 0.359  -2.181 -2.177 C12 YA2 21 
YA2 C11 C11 C 0 1 N N N 5.794  7.645  59.629 -0.988 -2.060 -2.909 C11 YA2 22 
YA2 C10 C10 C 0 1 N N N 7.287  7.765  59.368 -2.169 -2.221 -1.954 C10 YA2 23 
YA2 C9  C9  C 0 1 N N N 7.845  6.508  58.669 -1.990 -1.344 -0.722 C9  YA2 24 
YA2 C8  C8  C 0 1 N N N 8.708  6.539  57.640 -2.943 -0.528 -0.286 C8  YA2 25 
YA2 C7  C7  C 0 1 N N N 9.148  7.808  57.079 -4.228 -0.449 -0.998 C7  YA2 26 
YA2 C1  C1  C 0 1 N N N 9.789  7.910  55.897 -5.215 0.292  -0.507 C1  YA2 27 
YA2 C2  C2  C 0 1 N N N 10.154 9.275  55.350 -6.578 0.288  -1.162 C2  YA2 28 
YA2 C6  C6  C 0 1 N N N 10.144 6.652  55.124 -4.998 1.149  0.719  C6  YA2 29 
YA2 C5  C5  C 0 1 N N R 11.528 6.730  54.481 -6.050 0.774  1.770  C5  YA2 30 
YA2 O33 O33 O 0 1 N N N 11.703 5.613  53.532 -6.027 1.728  2.834  O33 YA2 31 
YA2 C4  C4  C 0 1 N N N 11.689 8.062  53.835 -7.411 0.775  1.112  C4  YA2 32 
YA2 C32 C32 C 0 1 N N N 11.993 8.126  52.574 -8.385 1.505  1.597  C32 YA2 33 
YA2 C3  C3  C 0 1 N N R 11.508 9.313  54.648 -7.627 -0.085 -0.106 C3  YA2 34 
YA2 O34 O34 O 0 1 N N N 12.595 9.429  55.592 -7.489 -1.462 0.249  O34 YA2 35 
YA2 H1  H1  H 0 1 N N N 1.990  -0.026 59.946 3.872  -1.436 2.534  H1  YA2 36 
YA2 H2  H2  H 0 1 N N N 3.601  -1.652 57.396 5.818  1.273  1.287  H2  YA2 37 
YA2 H3  H3  H 0 1 N N N 3.323  -0.388 56.150 6.957  0.357  2.302  H3  YA2 38 
YA2 H4  H4  H 0 1 N N N 1.863  -2.330 55.800 7.968  1.117  0.130  H4  YA2 39 
YA2 H5  H5  H 0 1 N N N 1.187  -2.126 57.452 7.977  -0.653 0.319  H5  YA2 40 
YA2 H6  H6  H 0 1 N N N 0.910  -0.862 56.206 6.771  0.124  -0.735 H6  YA2 41 
YA2 H7  H7  H 0 1 N N N 1.416  1.863  58.616 5.537  -2.990 1.516  H7  YA2 42 
YA2 H8  H8  H 0 1 N N N 0.573  0.608  57.647 6.928  -2.231 0.703  H8  YA2 43 
YA2 H9  H9  H 0 1 N N N 1.044  2.621  56.295 7.614  -1.231 2.897  H9  YA2 44 
YA2 H10 H10 H 0 1 N N N 2.796  2.453  56.652 6.275  -2.103 3.681  H10 YA2 45 
YA2 H11 H11 H 0 1 N N N 1.953  1.198  55.682 7.608  -3.010 2.928  H11 YA2 46 
YA2 H12 H12 H 0 1 N N N 4.705  0.003  58.804 5.344  -0.908 -0.775 H12 YA2 47 
YA2 H13 H13 H 0 1 N N N 4.398  1.309  57.610 4.006  -1.756 0.038  H13 YA2 48 
YA2 H14 H14 H 0 1 N N N 2.772  1.765  59.918 3.423  0.667  0.942  H14 YA2 49 
YA2 H15 H15 H 0 1 N N N 4.561  0.227  60.962 5.506  1.675  -0.024 H15 YA2 50 
YA2 H16 H16 H 0 1 N N N 5.675  1.625  60.786 4.908  1.277  -1.653 H16 YA2 51 
YA2 H17 H17 H 0 1 N N N 4.078  3.052  62.037 2.857  2.642  -1.191 H17 YA2 52 
YA2 H18 H18 H 0 1 N N N 2.969  1.651  62.217 3.552  3.102  0.382  H18 YA2 53 
YA2 H19 H19 H 0 1 N N N 4.667  0.420  63.497 5.506  4.099  -0.772 H19 YA2 54 
YA2 H20 H20 H 0 1 N N N 5.862  1.734  63.232 4.812  3.639  -2.345 H20 YA2 55 
YA2 H21 H21 H 0 1 N N N 4.829  1.897  65.473 4.316  6.010  -1.812 H21 YA2 56 
YA2 H22 H22 H 0 1 N N N 4.397  3.311  64.451 2.823  5.044  -1.877 H22 YA2 57 
YA2 H23 H23 H 0 1 N N N 3.203  1.996  64.716 3.517  5.503  -0.304 H23 YA2 58 
YA2 H24 H24 H 0 1 N N N 4.063  3.228  58.070 2.029  1.028  -1.125 H24 YA2 59 
YA2 H25 H25 H 0 1 N N N 2.022  3.646  59.353 3.644  -1.354 -2.143 H25 YA2 60 
YA2 H26 H26 H 0 1 N N N 3.015  4.134  60.768 2.235  -0.631 -2.956 H26 YA2 61 
YA2 H27 H27 H 0 1 N N N 3.073  5.099  59.255 3.736  0.308  -2.773 H27 YA2 62 
YA2 H28 H28 H 0 1 N N N 5.634  3.636  60.639 2.194  -1.887 -0.211 H28 YA2 63 
YA2 H29 H29 H 0 1 N N N 6.247  2.451  57.945 1.561  -1.109 1.865  H29 YA2 64 
YA2 H30 H30 H 0 1 N N N 7.006  2.143  59.543 1.575  0.575  1.267  H30 YA2 65 
YA2 H31 H31 H 0 1 N N N 8.736  3.538  58.893 -0.759 -0.749 2.009  H31 YA2 66 
YA2 H32 H32 H 0 1 N N N 7.843  4.047  57.421 -0.730 0.548  0.768  H32 YA2 67 
YA2 H33 H33 H 0 1 N N N 7.666  5.146  60.272 -0.504 -2.479 0.336  H33 YA2 68 
YA2 H34 H34 H 0 1 N N N 4.215  5.486  57.737 0.123  1.030  -1.020 H34 YA2 69 
YA2 H35 H35 H 0 1 N N N 5.665  6.501  57.428 0.695  0.434  -2.596 H35 YA2 70 
YA2 H36 H36 H 0 1 N N N 5.698  4.747  57.043 -1.002 0.192  -2.115 H36 YA2 71 
YA2 H37 H37 H 0 1 N N N 4.290  6.222  60.237 1.178  -2.036 -2.882 H37 YA2 72 
YA2 H38 H38 H 0 1 N N N 5.848  6.086  61.120 0.441  -3.162 -1.711 H38 YA2 73 
YA2 H39 H39 H 0 1 N N N 5.509  8.394  60.382 -1.047 -1.082 -3.386 H39 YA2 74 
YA2 H40 H40 H 0 1 N N N 5.257  7.846  58.690 -1.046 -2.832 -3.676 H40 YA2 75 
YA2 H41 H41 H 0 1 N N N 7.807  7.900  60.328 -3.087 -1.936 -2.467 H41 YA2 76 
YA2 H42 H42 H 0 1 N N N 7.468  8.640  58.726 -2.240 -3.263 -1.643 H42 YA2 77 
YA2 H43 H43 H 0 1 N N N 9.079  5.613  57.225 -2.775 0.078  0.593  H43 YA2 78 
YA2 H44 H44 H 0 1 N N N 8.952  8.712  57.637 -4.368 -0.993 -1.921 H44 YA2 79 
YA2 H45 H45 H 0 1 N N N 10.176 9.989  56.186 -6.796 1.279  -1.560 H45 YA2 80 
YA2 H46 H46 H 0 1 N N N 9.381  9.578  54.629 -6.594 -0.443 -1.970 H46 YA2 81 
YA2 H47 H47 H 0 1 N N N 9.395  6.502  54.332 -4.000 0.968  1.119  H47 YA2 82 
YA2 H48 H48 H 0 1 N N N 10.124 5.796  55.815 -5.101 2.201  0.453  H48 YA2 83 
YA2 H49 H49 H 0 1 N N N 12.280 6.636  55.279 -5.835 -0.219 2.165  H49 YA2 84 
YA2 H50 H50 H 0 1 N N N 11.591 4.788  53.989 -6.669 1.552  3.535  H50 YA2 85 
YA2 H51 H51 H 0 1 N N N 12.119 9.087  52.097 -8.219 2.114  2.473  H51 YA2 86 
YA2 H52 H52 H 0 1 N N N 12.120 7.219  52.002 -9.354 1.498  1.119  H52 YA2 87 
YA2 H53 H53 H 0 1 N N N 11.521 10.178 53.968 -8.624 0.094  -0.508 H53 YA2 88 
YA2 H54 H54 H 0 1 N N N 12.484 10.219 56.108 -8.118 -1.760 0.921  H54 YA2 89 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YA2 C32 C4  DOUB N N 1  
YA2 O33 C5  SING N N 2  
YA2 C4  C5  SING N N 3  
YA2 C4  C3  SING N N 4  
YA2 C5  C6  SING N N 5  
YA2 C3  C2  SING N N 6  
YA2 C3  O34 SING N N 7  
YA2 C6  C1  SING N N 8  
YA2 C2  C1  SING N N 9  
YA2 C1  C7  DOUB N N 10 
YA2 C28 C27 SING N N 11 
YA2 C30 C29 SING N N 12 
YA2 C29 C26 SING N N 13 
YA2 C7  C8  SING N N 14 
YA2 C8  C9  DOUB N E 15 
YA2 C35 C13 SING N N 16 
YA2 C27 C26 SING N N 17 
YA2 C26 C25 SING N N 18 
YA2 C26 O31 SING N N 19 
YA2 C25 C20 SING N N 20 
YA2 C15 C16 SING N N 21 
YA2 C15 C14 SING N N 22 
YA2 C9  C14 SING N N 23 
YA2 C9  C10 SING N N 24 
YA2 C16 C17 SING N N 25 
YA2 C18 C17 SING N N 26 
YA2 C18 C20 SING N N 27 
YA2 C18 C19 SING N N 28 
YA2 C13 C14 SING N N 29 
YA2 C13 C17 SING N N 30 
YA2 C13 C12 SING N N 31 
YA2 C10 C11 SING N N 32 
YA2 C11 C12 SING N N 33 
YA2 C20 C21 SING N N 34 
YA2 C21 C22 SING N N 35 
YA2 C22 C23 SING N N 36 
YA2 C23 C24 SING N N 37 
YA2 O31 H1  SING N N 38 
YA2 C29 H2  SING N N 39 
YA2 C29 H3  SING N N 40 
YA2 C30 H4  SING N N 41 
YA2 C30 H5  SING N N 42 
YA2 C30 H6  SING N N 43 
YA2 C27 H7  SING N N 44 
YA2 C27 H8  SING N N 45 
YA2 C28 H9  SING N N 46 
YA2 C28 H10 SING N N 47 
YA2 C28 H11 SING N N 48 
YA2 C25 H12 SING N N 49 
YA2 C25 H13 SING N N 50 
YA2 C20 H14 SING N N 51 
YA2 C21 H15 SING N N 52 
YA2 C21 H16 SING N N 53 
YA2 C22 H17 SING N N 54 
YA2 C22 H18 SING N N 55 
YA2 C23 H19 SING N N 56 
YA2 C23 H20 SING N N 57 
YA2 C24 H21 SING N N 58 
YA2 C24 H22 SING N N 59 
YA2 C24 H23 SING N N 60 
YA2 C18 H24 SING N N 61 
YA2 C19 H25 SING N N 62 
YA2 C19 H26 SING N N 63 
YA2 C19 H27 SING N N 64 
YA2 C17 H28 SING N N 65 
YA2 C16 H29 SING N N 66 
YA2 C16 H30 SING N N 67 
YA2 C15 H31 SING N N 68 
YA2 C15 H32 SING N N 69 
YA2 C14 H33 SING N N 70 
YA2 C35 H34 SING N N 71 
YA2 C35 H35 SING N N 72 
YA2 C35 H36 SING N N 73 
YA2 C12 H37 SING N N 74 
YA2 C12 H38 SING N N 75 
YA2 C11 H39 SING N N 76 
YA2 C11 H40 SING N N 77 
YA2 C10 H41 SING N N 78 
YA2 C10 H42 SING N N 79 
YA2 C8  H43 SING N N 80 
YA2 C7  H44 SING N N 81 
YA2 C2  H45 SING N N 82 
YA2 C2  H46 SING N N 83 
YA2 C6  H47 SING N N 84 
YA2 C6  H48 SING N N 85 
YA2 C5  H49 SING N N 86 
YA2 O33 H50 SING N N 87 
YA2 C32 H51 SING N N 88 
YA2 C32 H52 SING N N 89 
YA2 C3  H53 SING N N 90 
YA2 O34 H54 SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YA2 SMILES           ACDLabs              12.01 "OC3C(=C)\C(O)C/C(=C\C=C1/CCCC2(C)C(C(C)C(CCCC)CC(O)(CC)CC)CCC12)C3" 
YA2 InChI            InChI                1.03  
"InChI=1S/C32H54O3/c1-7-10-12-26(21-32(35,8-2)9-3)22(4)27-16-17-28-25(13-11-18-31(27,28)6)15-14-24-19-29(33)23(5)30(34)20-24/h14-15,22,26-30,33-35H,5,7-13,16-21H2,1-4,6H3/b25-15+/t22-,26-,27-,28+,29-,30-,31-/m1/s1" 
YA2 InChIKey         InChI                1.03  OILLQCLQUXHGBN-ZVBNMKQKSA-N 
YA2 SMILES_CANONICAL CACTVS               3.385 "CCCC[C@H](CC(O)(CC)CC)[C@@H](C)[C@H]1CC[C@H]2/C(CCC[C@]12C)=C/C=C3C[C@@H](O)C(=C)[C@H](O)C3" 
YA2 SMILES           CACTVS               3.385 "CCCC[CH](CC(O)(CC)CC)[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3" 
YA2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCC[C@H](CC(CC)(CC)O)[C@@H](C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](C(=C)[C@@H](C3)O)O)C" 
YA2 SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCC(CC(CC)(CC)O)C(C)C1CCC2C1(CCCC2=CC=C3CC(C(=C)C(C3)O)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YA2 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,3R,7E,17beta)-17-[(2R,3R)-3-butyl-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol"                                                                   
YA2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,3R)-3-butyl-5-ethyl-5-oxidanyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YA2 "Create component" 2014-05-02 PDBJ 
YA2 "Initial release"  2014-06-11 RCSB 
# 
