data_YV2
# 
_chem_comp.id                                    YV2 
_chem_comp.name                                  "(2S)-2-{(5S)-7-[(2E)-4-(dimethylamino)-4-methylpent-2-enoyl]-1-oxo-2,7-diazaspiro[4.4]nonan-2-yl}-N-[(1P,8S,10R,14S,21M)-22-ethyl-21-{2-[(1S)-1-methoxyethyl]pyridin-3-yl}-18,18-dimethyl-9,15-dioxo-16-oxa-10,22,28-triazapentacyclo[18.5.2.1~2,6~.1~10,14~.0~23,27~]nonacosa-1(25),2(29),3,5,20,23,26-heptaen-8-yl]-3-methylbutanamide (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C57 H76 N8 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        985.263 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YV2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8G9P 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YV2 C1  C1  C 0 1 N N N N N N 24.444 -16.164 28.425 8.526   3.631  -0.123 C1  YV2 1   
YV2 C10 C2  C 0 1 Y N N N N N 30.864 -18.328 32.207 1.679   3.538  3.799  C10 YV2 2   
YV2 C11 C3  C 0 1 Y N N N N N 31.830 -18.760 33.118 0.415   3.622  4.346  C11 YV2 3   
YV2 C12 C4  C 0 1 Y N N N N N 32.293 -17.895 34.116 -0.507  2.617  4.120  C12 YV2 4   
YV2 C13 C5  C 0 1 Y N N N N N 31.771 -16.583 34.181 -0.170  1.524  3.341  C13 YV2 5   
YV2 C14 C6  C 0 1 N N N N N N 32.249 -15.634 35.259 -1.181  0.431  3.106  C14 YV2 6   
YV2 C15 C7  C 0 1 N N S N N N 33.783 -15.420 35.208 -0.519  -0.721 2.350  C15 YV2 7   
YV2 C16 C8  C 0 1 N N N N N N 35.350 -17.245 35.765 -1.634  -0.323 0.220  C16 YV2 8   
YV2 C17 C9  C 0 1 N N S N N N 35.857 -18.149 36.868 -1.595  -0.104 -1.271 C17 YV2 9   
YV2 C18 C10 C 0 1 N N N N N N 37.381 -18.105 37.027 -1.233  1.354  -1.562 C18 YV2 10  
YV2 C19 C11 C 0 1 N N N N N N 37.791 -16.677 37.390 0.202   1.624  -1.104 C19 YV2 11  
YV2 C2  C12 C 0 1 N N N N N N 25.689 -16.033 27.530 8.417   2.523  0.927  C2  YV2 12  
YV2 C20 C13 C 0 1 N N N N N N 37.827 -18.957 38.200 -1.347  1.617  -3.065 C20 YV2 13  
YV2 C21 C14 C 0 1 N N N N N N 36.164 -20.472 35.792 -3.180  -1.516 -2.764 C21 YV2 14  
YV2 C22 C15 C 0 1 N N N N N N 35.427 -21.784 36.162 -4.542  -1.189 -3.421 C22 YV2 15  
YV2 C23 C16 C 0 1 N N R N N N 33.999 -21.363 36.548 -5.176  -0.271 -2.368 C23 YV2 16  
YV2 C24 C17 C 0 1 N N N N N N 33.048 -21.300 35.376 -6.029  0.827  -3.029 C24 YV2 17  
YV2 C25 C18 C 0 1 N N N N N N 31.666 -21.287 35.979 -7.034  1.159  -1.896 C25 YV2 18  
YV2 C26 C19 C 0 1 N N N N N N 33.244 -22.245 37.570 -6.159  -1.031 -1.475 C26 YV2 19  
YV2 C27 C20 C 0 1 N N N N N N 30.793 -22.046 38.056 -8.403  -0.435 -0.519 C27 YV2 20  
YV2 C28 C21 C 0 1 N N N N N N 30.949 -22.734 39.341 -9.518  0.521  -0.445 C28 YV2 21  
YV2 C29 C22 C 0 1 N N N N N N 29.939 -23.459 39.853 -10.606 0.220  0.258  C29 YV2 22  
YV2 C3  C23 C 0 1 Y N N N N N 27.452 -15.907 29.262 5.963   2.176  1.401  C3  YV2 23  
YV2 C30 C24 C 0 1 N N N N N N 30.238 -24.073 41.209 -11.800 1.140  0.230  C30 YV2 24  
YV2 C31 C25 C 0 1 N N N N N N 30.715 -22.925 42.095 -13.047 0.346  -0.165 C31 YV2 25  
YV2 C32 C26 C 0 1 N N N N N N 28.967 -24.661 41.817 -12.003 1.754  1.616  C32 YV2 26  
YV2 C33 C27 C 0 1 N N N N N N 30.861 -26.357 40.510 -11.526 1.671  -2.117 C33 YV2 27  
YV2 C34 C28 C 0 1 N N N N N N 31.815 -25.413 42.490 -12.590 3.261  -0.632 C34 YV2 28  
YV2 C35 C29 C 0 1 N N N N N N 34.205 -19.957 37.075 -4.029  0.306  -1.592 C35 YV2 29  
YV2 C36 C30 C 0 1 N N N N N N 34.176 -13.997 35.529 -1.308  -1.988 2.569  C36 YV2 30  
YV2 C37 C31 C 0 1 N N N N N N 34.428 -11.704 34.733 -1.672  -4.369 2.125  C37 YV2 31  
YV2 C38 C32 C 0 1 N N N N N N 33.255 -10.827 34.287 -1.546  -5.220 0.861  C38 YV2 32  
YV2 C39 C33 C 0 1 N N N N N N 32.814 -11.223 32.889 -0.084  -5.462 0.504  C39 YV2 33  
YV2 C4  C34 C 0 1 Y N N N N N 28.206 -14.933 29.952 4.985   1.237  1.018  C4  YV2 34  
YV2 C40 C35 C 0 1 N N S N N N 32.505 -12.735 32.863 0.822   -4.376 1.068  C40 YV2 35  
YV2 C41 C36 C 0 1 N N N N N N 32.186 -13.085 31.472 2.077   -4.261 0.240  C41 YV2 36  
YV2 C42 C37 C 0 1 N N N N N N 30.760 -12.594 29.544 4.086   -3.126 -0.386 C42 YV2 37  
YV2 C43 C38 C 0 1 N N N N N N 29.572 -11.697 29.261 5.021   -2.070 0.210  C43 YV2 38  
YV2 C44 C39 C 0 1 N N N N N N 29.760 -10.302 29.903 4.558   -1.719 1.625  C44 YV2 39  
YV2 C45 C40 C 0 1 N N N N N N 29.425 -11.567 27.757 6.447   -2.620 0.261  C45 YV2 40  
YV2 C46 C41 C 0 1 N N N N N N 28.310 -12.299 29.872 4.989   -0.814 -0.663 C46 YV2 41  
YV2 C47 C42 C 0 1 Y N N N N N 27.826 -13.671 29.444 5.634   0.334  0.068  C47 YV2 42  
YV2 C48 C43 C 0 1 Y N N N N N 26.832 -13.947 28.423 6.928   0.727  -0.029 C48 YV2 43  
YV2 C49 C44 C 0 1 Y N N N N N 26.105 -12.951 27.609 7.957   0.074  -0.867 C49 YV2 44  
YV2 C5  C45 C 0 1 Y N N N N N 29.123 -15.309 30.929 3.696   1.320  1.548  C5  YV2 45  
YV2 C50 C46 C 0 1 Y N N N N N 26.259 -12.832 26.223 8.125   0.444  -2.201 C50 YV2 46  
YV2 C51 C47 C 0 1 Y N N N N N 24.672 -11.093 26.153 9.837   -1.076 -2.469 C51 YV2 47  
YV2 C52 C48 C 0 1 Y N N N N N 24.499 -11.177 27.530 9.729   -1.502 -1.158 C52 YV2 48  
YV2 C53 C49 C 0 1 Y N N N N N 25.237 -12.118 28.272 8.782   -0.922 -0.332 C53 YV2 49  
YV2 C54 C50 C 0 1 N N S N N N 27.172 -13.700 25.423 7.247   1.514  -2.796 C54 YV2 50  
YV2 C55 C51 C 0 1 N N N N N N 28.091 -12.874 24.518 6.203   0.869  -3.710 C55 YV2 51  
YV2 C56 C52 C 0 1 N N N N N N 27.017 -15.732 24.189 7.540   3.756  -3.593 C56 YV2 52  
YV2 C57 C53 C 0 1 Y N N N N N 30.826 -16.179 33.265 1.088   1.435  2.781  C57 YV2 53  
YV2 C6  C54 C 0 1 Y N N N N N 29.307 -16.649 31.270 3.385   2.346  2.428  C6  YV2 54  
YV2 C7  C55 C 0 1 Y N N N N N 28.577 -17.646 30.588 4.358   3.288  2.779  C7  YV2 55  
YV2 C8  C56 C 0 1 Y N N N N N 27.646 -17.268 29.609 5.625   3.203  2.277  C8  YV2 56  
YV2 C9  C57 C 0 1 Y N N N N N 30.329 -17.047 32.284 2.023   2.442  3.010  C9  YV2 57  
YV2 N1  N1  N 0 1 Y N N N N N 26.659 -15.307 28.360 7.137   1.827  0.770  N1  YV2 58  
YV2 N2  N2  N 0 1 N N N N N N 34.401 -16.341 36.130 -0.485  -0.409 0.919  N2  YV2 59  
YV2 N3  N3  N 0 1 N N N N N N 35.379 -19.531 36.605 -2.910  -0.403 -1.843 N3  YV2 60  
YV2 N4  N4  N 0 1 N N N N N N 31.851 -21.897 37.276 -7.300  -0.131 -1.231 N4  YV2 61  
YV2 N5  N5  N 0 1 N N N N N N 31.309 -25.101 41.141 -11.570 2.210  -0.751 N5  YV2 62  
YV2 N6  N6  N 0 1 N N R N N N 34.058 -13.122 34.537 -0.947  -3.111 1.919  N6  YV2 63  
YV2 N7  N7  N 0 1 N N N N N N 33.619 -13.557 33.325 0.118   -3.084 1.053  N7  YV2 64  
YV2 N8  N8  N 0 1 Y N N N N N 25.529 -11.916 25.516 9.045   -0.134 -2.946 N8  YV2 65  
YV2 O1  O1  O 0 1 N N N N N N 35.757 -17.373 34.612 -2.700  -0.423 0.790  O1  YV2 66  
YV2 O2  O2  O 0 1 N N N N N N 29.699 -21.607 37.706 -8.476  -1.501 0.063  O2  YV2 67  
YV2 O3  O3  O 0 1 N N N N N N 33.444 -19.314 37.791 -4.098  1.264  -0.852 O3  YV2 68  
YV2 O4  O4  O 0 1 N N N N N N 34.564 -13.716 36.632 -2.257  -1.996 3.324  O4  YV2 69  
YV2 O5  O5  O 0 1 N N N N N N 32.853 -13.792 30.746 2.366   -5.121 -0.558 O5  YV2 70  
YV2 O6  O6  O 0 1 N N N N N N 31.049 -12.482 30.926 2.869   -3.188 0.401  O6  YV2 71  
YV2 O7  O7  O 0 1 N N N N N N 26.332 -14.538 24.619 8.049   2.421  -3.556 O7  YV2 72  
YV2 H1  H1  H 0 1 N N N N N N 23.655 -16.702 27.879 7.709   4.340  0.010  H1  YV2 73  
YV2 H2  H2  H 0 1 N N N N N N 24.705 -16.722 29.336 9.478   4.149  -0.006 H2  YV2 74  
YV2 H3  H3  H 0 1 N N N N N N 24.083 -15.162 28.699 8.470   3.194  -1.120 H3  YV2 75  
YV2 H4  H4  H 0 1 N N N N N N 30.527 -18.999 31.431 2.399   4.323  3.977  H4  YV2 76  
YV2 H5  H5  H 0 1 N N N N N N 32.221 -19.765 33.052 0.146   4.474  4.953  H5  YV2 77  
YV2 H6  H6  H 0 1 N N N N N N 33.038 -18.225 34.825 -1.494  2.685  4.553  H6  YV2 78  
YV2 H7  H7  H 0 1 N N N N N N 31.751 -14.663 35.123 -1.555  0.070  4.064  H7  YV2 79  
YV2 H8  H8  H 0 1 N N N N N N 31.981 -16.049 36.242 -2.010  0.823  2.517  H8  YV2 80  
YV2 H9  H9  H 0 1 N N N N N N 34.121 -15.649 34.187 0.498   -0.858 2.715  H9  YV2 81  
YV2 H10 H10 H 0 1 N N N N N N 35.414 -17.807 37.815 -0.847  -0.760 -1.715 H10 YV2 82  
YV2 H11 H11 H 0 1 N N N N N N 37.876 -18.427 36.099 -1.915  2.013  -1.025 H11 YV2 83  
YV2 H12 H12 H 0 1 N N N N N N 38.884 -16.627 37.508 0.884   0.959  -1.635 H12 YV2 84  
YV2 H13 H13 H 0 1 N N N N N N 37.477 -15.991 36.589 0.464   2.660  -1.320 H13 YV2 85  
YV2 H14 H14 H 0 1 N N N N N N 37.307 -16.385 38.334 0.281   1.445  -0.032 H14 YV2 86  
YV2 H15 H15 H 0 1 N N N N N N 25.455 -15.465 26.618 9.234   1.815  0.794  H15 YV2 87  
YV2 H16 H16 H 0 1 N N N N N N 26.077 -17.025 27.255 8.473   2.960  1.923  H16 YV2 88  
YV2 H17 H17 H 0 1 N N N N N N 38.922 -18.909 38.293 -2.369  1.425  -3.391 H17 YV2 89  
YV2 H18 H18 H 0 1 N N N N N N 37.364 -18.580 39.124 -1.088  2.655  -3.273 H18 YV2 90  
YV2 H19 H19 H 0 1 N N N N N N 37.518 -20.000 38.034 -0.664  0.958  -3.602 H19 YV2 91  
YV2 H20 H20 H 0 1 N N N N N N 37.222 -20.494 36.093 -3.243  -2.454 -2.213 H20 YV2 92  
YV2 H21 H21 H 0 1 N N N N N N 36.093 -20.248 34.717 -2.400  -1.575 -3.522 H21 YV2 93  
YV2 H22 H22 H 0 1 N N N N N N 35.406 -22.468 35.301 -4.404  -0.663 -4.366 H22 YV2 94  
YV2 H23 H23 H 0 1 N N N N N N 35.924 -22.277 37.010 -5.136  -2.092 -3.561 H23 YV2 95  
YV2 H24 H24 H 0 1 N N N N N N 33.177 -22.180 34.729 -5.421  1.696  -3.281 H24 YV2 96  
YV2 H25 H25 H 0 1 N N N N N N 33.220 -20.385 34.790 -6.544  0.444  -3.910 H25 YV2 97  
YV2 H26 H26 H 0 1 N N N N N N 31.292 -20.257 36.080 -6.592  1.864  -1.192 H26 YV2 98  
YV2 H27 H27 H 0 1 N N N N N N 30.965 -21.873 35.366 -7.955  1.567  -2.313 H27 YV2 99  
YV2 H28 H28 H 0 1 N N N N N N 33.437 -23.314 37.399 -6.499  -1.934 -1.981 H28 YV2 100 
YV2 H29 H29 H 0 1 N N N N N N 33.514 -21.985 38.604 -5.680  -1.291 -0.531 H29 YV2 101 
YV2 H30 H30 H 0 1 N N N N N N 31.882 -22.658 39.880 -9.453  1.467  -0.962 H30 YV2 102 
YV2 H32 H32 H 0 1 N N N N N N 28.996 -23.593 39.344 -10.635 -0.683 0.849  H32 YV2 103 
YV2 H34 H34 H 0 1 N N N N N N 30.949 -23.309 43.099 -13.217 -0.448 0.563  H34 YV2 104 
YV2 H35 H35 H 0 1 N N N N N N 31.617 -22.473 41.656 -13.910 1.011  -0.185 H35 YV2 105 
YV2 H36 H36 H 0 1 N N N N N N 29.923 -22.165 42.169 -12.901 -0.092 -1.152 H36 YV2 106 
YV2 H37 H37 H 0 1 N N N N N N 29.199 -25.102 42.798 -11.115 2.320  1.897  H37 YV2 107 
YV2 H38 H38 H 0 1 N N N N N N 28.218 -23.865 41.941 -12.866 2.420  1.595  H38 YV2 108 
YV2 H39 H39 H 0 1 N N N N N N 28.568 -25.440 41.150 -12.174 0.961  2.343  H39 YV2 109 
YV2 H40 H40 H 0 1 N N N N N N 31.694 -27.075 40.489 -12.512 1.293  -2.390 H40 YV2 110 
YV2 H41 H41 H 0 1 N N N N N N 30.027 -26.780 41.088 -11.235 2.461  -2.809 H41 YV2 111 
YV2 H42 H42 H 0 1 N N N N N N 30.528 -26.152 39.482 -10.800 0.860  -2.164 H42 YV2 112 
YV2 H43 H43 H 0 1 N N N N N N 32.155 -24.487 42.978 -13.576 2.832  -0.807 H43 YV2 113 
YV2 H44 H44 H 0 1 N N N N N N 31.011 -25.868 43.087 -12.553 3.691  0.370  H44 YV2 114 
YV2 H45 H45 H 0 1 N N N N N N 32.657 -26.116 42.412 -12.396 4.040  -1.369 H45 YV2 115 
YV2 H46 H46 H 0 1 N N N N N N 35.318 -11.467 34.131 -2.724  -4.158 2.320  H46 YV2 116 
YV2 H47 H47 H 0 1 N N N N N N 34.644 -11.521 35.796 -1.243  -4.904 2.973  H47 YV2 117 
YV2 H48 H48 H 0 1 N N N N N N 33.568 -9.773  34.285 -2.037  -6.179 1.025  H48 YV2 118 
YV2 H49 H49 H 0 1 N N N N N N 32.415 -10.959 34.985 -2.034  -4.705 0.034  H49 YV2 119 
YV2 H50 H50 H 0 1 N N N N N N 33.618 -11.000 32.173 0.225   -6.427 0.906  H50 YV2 120 
YV2 H51 H51 H 0 1 N N N N N N 31.911 -10.658 32.614 0.018   -5.480 -0.581 H51 YV2 121 
YV2 H52 H52 H 0 1 N N N N N N 31.625 -12.920 33.496 1.094   -4.620 2.097  H52 YV2 122 
YV2 H53 H53 H 0 1 N N N N N N 30.513 -13.636 29.294 3.842   -2.858 -1.414 H53 YV2 123 
YV2 H54 H54 H 0 1 N N N N N N 31.627 -12.270 28.950 4.579   -4.098 -0.370 H54 YV2 124 
YV2 H55 H55 H 0 1 N N N N N N 29.865 -10.410 30.993 4.579   -2.614 2.247  H55 YV2 125 
YV2 H56 H56 H 0 1 N N N N N N 30.664 -9.829  29.493 5.223   -0.966 2.049  H56 YV2 126 
YV2 H57 H57 H 0 1 N N N N N N 28.884 -9.675  29.680 3.542   -1.326 1.589  H57 YV2 127 
YV2 H58 H58 H 0 1 N N N N N N 28.567 -10.919 27.527 6.803   -2.801 -0.754 H58 YV2 128 
YV2 H59 H59 H 0 1 N N N N N N 30.341 -11.126 27.336 7.099   -1.897 0.751  H59 YV2 129 
YV2 H60 H60 H 0 1 N N N N N N 29.261 -12.562 27.317 6.456   -3.555 0.821  H60 YV2 130 
YV2 H61 H61 H 0 1 N N N N N N 28.479 -12.349 30.958 5.531   -1.004 -1.589 H61 YV2 131 
YV2 H62 H62 H 0 1 N N N N N N 27.491 -11.596 29.660 3.954   -0.560 -0.894 H62 YV2 132 
YV2 H63 H63 H 0 1 N N N N N N 29.703 -14.549 31.432 2.947   0.591  1.274  H63 YV2 133 
YV2 H64 H64 H 0 1 N N N N N N 24.114 -10.361 25.588 10.575  -1.526 -3.116 H64 YV2 134 
YV2 H65 H65 H 0 1 N N N N N N 23.800 -10.522 28.029 10.378  -2.280 -0.782 H65 YV2 135 
YV2 H66 H66 H 0 1 N N N N N N 25.123 -12.184 29.344 8.683   -1.230 0.698  H66 YV2 136 
YV2 H67 H67 H 0 1 N N N N N N 27.788 -14.310 26.100 6.743   2.057  -1.996 H67 YV2 137 
YV2 H68 H68 H 0 1 N N N N N N 28.735 -12.232 25.137 5.591   0.177  -3.131 H68 YV2 138 
YV2 H69 H69 H 0 1 N N N N N N 28.717 -13.550 23.917 5.568   1.643  -4.140 H69 YV2 139 
YV2 H70 H70 H 0 1 N N N N N N 27.481 -12.248 23.850 6.707   0.326  -4.510 H70 YV2 140 
YV2 H71 H71 H 0 1 N N N N N N 26.338 -16.344 23.577 8.205   4.381  -4.188 H71 YV2 141 
YV2 H72 H72 H 0 1 N N N N N N 27.899 -15.454 23.593 6.546   3.753  -4.041 H72 YV2 142 
YV2 H73 H73 H 0 1 N N N N N N 27.337 -16.308 25.070 7.481   4.151  -2.579 H73 YV2 143 
YV2 H74 H74 H 0 1 N N N N N N 30.457 -15.165 33.304 1.347   0.585  2.167  H74 YV2 144 
YV2 H75 H75 H 0 1 N N N N N N 28.734 -18.690 30.818 4.104   4.092  3.454  H75 YV2 145 
YV2 H76 H76 H 0 1 N N N N N N 27.065 -18.029 29.109 6.367   3.934  2.562  H76 YV2 146 
YV2 H77 H77 H 0 1 N N N N N N 34.117 -16.314 37.088 0.365   -0.264 0.474  H77 YV2 147 
YV2 H79 H79 H 0 1 N N N N N N 33.317 -14.507 33.405 0.747   -2.327 1.277  H79 YV2 148 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YV2 C56 O7  SING N N 1   
YV2 C55 C54 SING N N 2   
YV2 O7  C54 SING N N 3   
YV2 C54 C50 SING N N 4   
YV2 N8  C51 DOUB Y N 5   
YV2 N8  C50 SING Y N 6   
YV2 C51 C52 SING Y N 7   
YV2 C50 C49 DOUB Y N 8   
YV2 C52 C53 DOUB Y N 9   
YV2 C2  N1  SING N N 10  
YV2 C2  C1  SING N N 11  
YV2 C49 C53 SING Y N 12  
YV2 C49 C48 SING N N 13  
YV2 C45 C43 SING N N 14  
YV2 N1  C48 SING Y N 15  
YV2 N1  C3  SING Y N 16  
YV2 C48 C47 DOUB Y N 17  
YV2 C43 C42 SING N N 18  
YV2 C43 C46 SING N N 19  
YV2 C43 C44 SING N N 20  
YV2 C3  C8  DOUB Y N 21  
YV2 C3  C4  SING Y N 22  
YV2 C47 C46 SING N N 23  
YV2 C47 C4  SING Y N 24  
YV2 C42 O6  SING N N 25  
YV2 C8  C7  SING Y N 26  
YV2 C4  C5  DOUB Y N 27  
YV2 C7  C6  DOUB Y N 28  
YV2 O5  C41 DOUB N N 29  
YV2 O6  C41 SING N N 30  
YV2 C5  C6  SING Y N 31  
YV2 C6  C9  SING N N 32  
YV2 C41 C40 SING N N 33  
YV2 C10 C9  DOUB Y N 34  
YV2 C10 C11 SING Y N 35  
YV2 C9  C57 SING Y N 36  
YV2 C40 C39 SING N N 37  
YV2 C40 N7  SING N N 38  
YV2 C39 C38 SING N N 39  
YV2 C11 C12 DOUB Y N 40  
YV2 C57 C13 DOUB Y N 41  
YV2 N7  N6  SING N N 42  
YV2 C12 C13 SING Y N 43  
YV2 C13 C14 SING N N 44  
YV2 C38 C37 SING N N 45  
YV2 N6  C37 SING N N 46  
YV2 N6  C36 SING N N 47  
YV2 O1  C16 DOUB N N 48  
YV2 C15 C14 SING N N 49  
YV2 C15 C36 SING N N 50  
YV2 C15 N2  SING N N 51  
YV2 C24 C25 SING N N 52  
YV2 C24 C23 SING N N 53  
YV2 C36 O4  DOUB N N 54  
YV2 C16 N2  SING N N 55  
YV2 C16 C17 SING N N 56  
YV2 C21 C22 SING N N 57  
YV2 C21 N3  SING N N 58  
YV2 C25 N4  SING N N 59  
YV2 C22 C23 SING N N 60  
YV2 C23 C35 SING N N 61  
YV2 C23 C26 SING N N 62  
YV2 N3  C17 SING N N 63  
YV2 N3  C35 SING N N 64  
YV2 C17 C18 SING N N 65  
YV2 C18 C19 SING N N 66  
YV2 C18 C20 SING N N 67  
YV2 C35 O3  DOUB N N 68  
YV2 N4  C26 SING N N 69  
YV2 N4  C27 SING N N 70  
YV2 O2  C27 DOUB N N 71  
YV2 C27 C28 SING N N 72  
YV2 C28 C29 DOUB N E 73  
YV2 C29 C30 SING N N 74  
YV2 C33 N5  SING N N 75  
YV2 N5  C30 SING N N 76  
YV2 N5  C34 SING N N 77  
YV2 C30 C32 SING N N 78  
YV2 C30 C31 SING N N 79  
YV2 C1  H1  SING N N 80  
YV2 C1  H2  SING N N 81  
YV2 C1  H3  SING N N 82  
YV2 C10 H4  SING N N 83  
YV2 C11 H5  SING N N 84  
YV2 C12 H6  SING N N 85  
YV2 C14 H7  SING N N 86  
YV2 C14 H8  SING N N 87  
YV2 C15 H9  SING N N 88  
YV2 C17 H10 SING N N 89  
YV2 C18 H11 SING N N 90  
YV2 C19 H12 SING N N 91  
YV2 C19 H13 SING N N 92  
YV2 C19 H14 SING N N 93  
YV2 C2  H15 SING N N 94  
YV2 C2  H16 SING N N 95  
YV2 C20 H17 SING N N 96  
YV2 C20 H18 SING N N 97  
YV2 C20 H19 SING N N 98  
YV2 C21 H20 SING N N 99  
YV2 C21 H21 SING N N 100 
YV2 C22 H22 SING N N 101 
YV2 C22 H23 SING N N 102 
YV2 C24 H24 SING N N 103 
YV2 C24 H25 SING N N 104 
YV2 C25 H26 SING N N 105 
YV2 C25 H27 SING N N 106 
YV2 C26 H28 SING N N 107 
YV2 C26 H29 SING N N 108 
YV2 C28 H30 SING N N 109 
YV2 C29 H32 SING N N 110 
YV2 C31 H34 SING N N 111 
YV2 C31 H35 SING N N 112 
YV2 C31 H36 SING N N 113 
YV2 C32 H37 SING N N 114 
YV2 C32 H38 SING N N 115 
YV2 C32 H39 SING N N 116 
YV2 C33 H40 SING N N 117 
YV2 C33 H41 SING N N 118 
YV2 C33 H42 SING N N 119 
YV2 C34 H43 SING N N 120 
YV2 C34 H44 SING N N 121 
YV2 C34 H45 SING N N 122 
YV2 C37 H46 SING N N 123 
YV2 C37 H47 SING N N 124 
YV2 C38 H48 SING N N 125 
YV2 C38 H49 SING N N 126 
YV2 C39 H50 SING N N 127 
YV2 C39 H51 SING N N 128 
YV2 C40 H52 SING N N 129 
YV2 C42 H53 SING N N 130 
YV2 C42 H54 SING N N 131 
YV2 C44 H55 SING N N 132 
YV2 C44 H56 SING N N 133 
YV2 C44 H57 SING N N 134 
YV2 C45 H58 SING N N 135 
YV2 C45 H59 SING N N 136 
YV2 C45 H60 SING N N 137 
YV2 C46 H61 SING N N 138 
YV2 C46 H62 SING N N 139 
YV2 C5  H63 SING N N 140 
YV2 C51 H64 SING N N 141 
YV2 C52 H65 SING N N 142 
YV2 C53 H66 SING N N 143 
YV2 C54 H67 SING N N 144 
YV2 C55 H68 SING N N 145 
YV2 C55 H69 SING N N 146 
YV2 C55 H70 SING N N 147 
YV2 C56 H71 SING N N 148 
YV2 C56 H72 SING N N 149 
YV2 C56 H73 SING N N 150 
YV2 C57 H74 SING N N 151 
YV2 C7  H75 SING N N 152 
YV2 C8  H76 SING N N 153 
YV2 N2  H77 SING N N 154 
YV2 N7  H79 SING N N 155 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YV2 SMILES           ACDLabs              12.01 "CN(C)C(C)(C)/C=C/C(=O)N1CCC2(C1)CCN(C2=O)C(C(C)C)C(=O)NC1Cc2cccc(c2)c2ccc3c(c2)c(CC(C)(C)COC(=O)C2CCCN(N2)C1=O)c(n3CC)c1cccnc1C(C)OC"                                                                                                                                                                                                                                                           
YV2 InChI            InChI                1.06  "InChI=1S/C57H76N8O7/c1-12-63-46-21-20-40-32-42(46)43(50(63)41-18-14-26-58-48(41)37(4)71-11)33-55(5,6)35-72-53(69)44-19-15-27-65(60-44)52(68)45(31-38-16-13-17-39(40)30-38)59-51(67)49(36(2)3)64-29-25-57(54(64)70)24-28-62(34-57)47(66)22-23-56(7,8)61(9)10/h13-14,16-18,20-23,26,30,32,36-37,44-45,49,60H,12,15,19,24-25,27-29,31,33-35H2,1-11H3,(H,59,67)/b23-22+/t37-,44-,45-,49-,57-/m0/s1" 
YV2 InChIKey         InChI                1.06  UACOSZLRWXNXST-XDTKWSOLSA-N                                                                                                                                                                                                                                                                                                                                                                      
YV2 SMILES_CANONICAL CACTVS               3.385 "CCn1c2ccc3cc2c(CC(C)(C)COC(=O)[C@@H]4CCC[N@@](N4)C(=O)[C@H](Cc5cccc3c5)NC(=O)[C@H](C(C)C)N6CC[C@]7(CCN(C7)C(=O)\C=C\C(C)(C)N(C)C)C6=O)c1c8cccnc8[C@H](C)OC"                                                                                                                                                                                                                                     
YV2 SMILES           CACTVS               3.385 "CCn1c2ccc3cc2c(CC(C)(C)COC(=O)[CH]4CCC[N](N4)C(=O)[CH](Cc5cccc3c5)NC(=O)[CH](C(C)C)N6CC[C]7(CCN(C7)C(=O)C=CC(C)(C)N(C)C)C6=O)c1c8cccnc8[CH](C)OC"                                                                                                                                                                                                                                               
YV2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCn1c2ccc-3cc2c(c1c4cccnc4[C@H](C)OC)CC(COC(=O)[C@@H]5CCCN(N5)C(=O)[C@H](Cc6cccc3c6)NC(=O)[C@H](C(C)C)N7CC[C@@]8(C7=O)CCN(C8)C(=O)/C=C/C(C)(C)N(C)C)(C)C"                                                                                                                                                                                                                                       
YV2 SMILES           "OpenEye OEToolkits" 2.0.7 "CCn1c2ccc-3cc2c(c1c4cccnc4C(C)OC)CC(COC(=O)C5CCCN(N5)C(=O)C(Cc6cccc3c6)NC(=O)C(C(C)C)N7CCC8(C7=O)CCN(C8)C(=O)C=CC(C)(C)N(C)C)(C)C"                                                                                                                                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           YV2 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           ACDLabs 
_pdbx_chem_comp_identifier.program_version   12.01 
_pdbx_chem_comp_identifier.identifier        "(2S)-2-{(5S)-7-[(2E)-4-(dimethylamino)-4-methylpent-2-enoyl]-1-oxo-2,7-diazaspiro[4.4]nonan-2-yl}-N-[(1P,8S,10R,14S,21M)-22-ethyl-21-{2-[(1S)-1-methoxyethyl]pyridin-3-yl}-18,18-dimethyl-9,15-dioxo-16-oxa-10,22,28-triazapentacyclo[18.5.2.1~2,6~.1~10,14~.0~23,27~]nonacosa-1(25),2(29),3,5,20,23,26-heptaen-8-yl]-3-methylbutanamide (non-preferred name)" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YV2 "Create component" 2023-02-22 RCSB 
YV2 "Initial release"  2023-08-16 RCSB 
YV2 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            YV2 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C29 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
