data_2F3
# 
_chem_comp.id                                    2F3 
_chem_comp.name                                  "1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H17 Cl F N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-10-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.872 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2F3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4MZ4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2F3 C1  C1  C  0 1 Y N N N N N 28.871 43.302 41.526 -4.396 -0.677 -0.652 C1  2F3 1  
2F3 C2  C2  C  0 1 Y N N N N N 27.634 43.124 40.847 -3.473 -1.718 -0.383 C2  2F3 2  
2F3 C3  C3  C  0 1 Y N N N N N 27.545 43.327 39.447 -3.670 -2.985 -0.954 C3  2F3 3  
2F3 C7  C7  C  0 1 Y N N N N N 26.627 42.567 43.002 -2.244 -0.200 0.976  C7  2F3 4  
2F3 C8  C8  C  0 1 Y N N N N N 26.524 42.752 41.609 -2.373 -1.455 0.456  C8  2F3 5  
2F3 C9  C9  C  0 1 Y N N N N N 27.891 42.740 43.559 -3.188 0.781  0.671  C9  2F3 6  
2F3 C10 C10 C  0 1 N N N N N N 23.038 45.905 46.071 3.274  -1.016 -0.386 C10 2F3 7  
2F3 C11 C11 C  0 1 Y N N N N N 24.284 43.818 48.201 2.375  2.120  -0.988 C11 2F3 8  
2F3 C12 C12 C  0 1 Y N N N N N 24.931 42.762 48.886 1.804  3.356  -1.089 C12 2F3 9  
2F3 C13 C13 C  0 1 Y N N N N N 24.334 43.857 46.779 1.749  1.124  -0.234 C13 2F3 10 
2F3 C14 C14 C  0 1 Y N N N N N 25.004 42.822 46.088 0.533  1.396  0.419  C14 2F3 11 
2F3 C15 C15 C  0 1 Y N N N N N 24.200 44.266 44.530 1.065  -0.753 0.880  C15 2F3 12 
2F3 C16 C16 C  0 1 Y N N N N N 23.827 44.739 45.793 2.085  -0.272 0.072  C16 2F3 13 
2F3 C19 C19 C  0 1 N N N N N N 23.915 44.916 43.253 0.984  -2.103 1.433  C19 2F3 14 
2F3 C20 C20 C  0 1 N N N N N N 25.425 42.138 43.757 -1.082 0.128  1.879  C20 2F3 15 
2F3 C21 C21 C  0 1 N N N N N N 21.722 46.086 45.335 4.465  -1.015 0.384  C21 2F3 16 
2F3 C22 C22 C  0 1 N N N N N N 21.369 48.124 46.610 5.504  -2.402 -1.208 C22 2F3 17 
2F3 C24 C24 C  0 1 N N N N N N 23.371 46.819 47.008 3.244  -1.734 -1.576 C24 2F3 18 
2F3 C4  C4  C  0 1 Y N N N N N 28.677 43.705 38.723 -4.746 -3.200 -1.760 C4  2F3 19 
2F3 C5  C5  C  0 1 Y N N N N N 29.885 43.888 39.380 -5.655 -2.178 -2.026 C5  2F3 20 
2F3 C6  C6  C  0 1 Y N N N N N 29.978 43.688 40.766 -5.492 -0.936 -1.493 C6  2F3 21 
2F3 N1  N1  N  0 1 Y N N N N N 28.994 43.107 42.864 -4.212 0.532  -0.111 N1  2F3 22 
2F3 N2  N2  N  0 1 Y N N N N N 24.890 43.074 44.752 0.138  0.255  1.077  N2  2F3 23 
2F3 C17 C17 C  0 1 Y N N N N N 25.607 41.786 48.148 0.605  3.634  -0.441 C17 2F3 24 
2F3 C18 C18 C  0 1 Y N N N N N 25.643 41.777 46.758 -0.033 2.664  0.303  C18 2F3 25 
2F3 O1  O1  O  0 1 N N N N N N 23.902 46.123 43.082 0.003  -2.417 2.305  O1  2F3 26 
2F3 N3  N3  N  0 1 N N N N N N 20.984 47.209 45.663 5.540  -1.704 -0.046 N3  2F3 27 
2F3 C23 C23 C  0 1 N N N N N N 22.520 47.971 47.286 4.388  -2.426 -1.978 C23 2F3 28 
2F3 O2  O2  O  0 1 N N N N N N 21.347 45.272 44.474 4.517  -0.393 1.431  O2  2F3 29 
2F3 O3  O3  O  0 1 N N N N N N 23.585 44.049 42.277 1.801  -2.944 1.108  O3  2F3 30 
2F3 C25 C25 C  0 1 N N N N N N 24.926 42.681 50.395 2.479  4.428  -1.906 C25 2F3 31 
2F3 F1  F1  F  0 1 N N N N N N 26.257 40.809 48.796 0.054  4.863  -0.551 F1  2F3 32 
2F3 H1  H1  H  0 1 N N N N N N 26.601 43.189 38.940 -2.972 -3.785 -0.755 H1  2F3 33 
2F3 H2  H2  H  0 1 N N N N N N 25.571 42.604 41.122 -1.651 -2.226 0.682  H2  2F3 34 
2F3 H4  H4  H  0 1 N N N N N N 23.759 44.585 48.751 3.307  1.911  -1.493 H4  2F3 35 
2F3 H5  H5  H  0 1 N N N N N N 24.627 41.941 43.026 -1.277 1.067  2.396  H5  2F3 36 
2F3 H6  H6  H  0 1 N N N N N N 25.679 41.206 44.283 -0.955 -0.670 2.611  H6  2F3 37 
2F3 H7  H7  H  0 1 N N N N N N 20.739 48.977 46.815 6.383  -2.941 -1.531 H7  2F3 38 
2F3 H8  H8  H  0 1 N N N N N N 24.288 46.694 47.564 2.349  -1.755 -2.180 H8  2F3 39 
2F3 H9  H9  H  0 1 N N N N N N 28.613 43.854 37.655 -4.899 -4.176 -2.196 H9  2F3 40 
2F3 H10 H10 H  0 1 N N N N N N 30.760 44.186 38.821 -6.500 -2.373 -2.669 H10 2F3 41 
2F3 H11 H11 H  0 1 N N N N N N 30.928 43.836 41.257 -6.206 -0.155 -1.709 H11 2F3 42 
2F3 H12 H12 H  0 1 N N N N N N 26.147 40.990 46.216 -0.966 2.887  0.799  H12 2F3 43 
2F3 H13 H13 H  0 1 N N N N N N 23.633 46.314 42.191 0.050  -3.322 2.641  H13 2F3 44 
2F3 H14 H14 H  0 1 N N N N N N 20.121 47.363 45.182 6.352  -1.700 0.484  H14 2F3 45 
2F3 H15 H15 H  0 1 N N N N N N 22.813 48.696 48.031 4.382  -2.988 -2.900 H15 2F3 46 
2F3 H16 H16 H  0 1 N N N N N N 25.794 43.226 50.795 2.122  4.378  -2.935 H16 2F3 47 
2F3 H17 H17 H  0 1 N N N N N N 24.000 43.130 50.783 2.245  5.406  -1.487 H17 2F3 48 
2F3 H18 H18 H  0 1 N N N N N N 24.981 41.627 50.706 3.558  4.273  -1.888 H18 2F3 49 
2F3 CL1 CL1 CL 0 0 N Y N N N N ?      ?      ?      -3.004 2.371  1.342  CL1 2F3 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2F3 C4  C5  DOUB Y N 1  
2F3 C4  C3  SING Y N 2  
2F3 C5  C6  SING Y N 3  
2F3 C3  C2  DOUB Y N 4  
2F3 C6  C1  DOUB Y N 5  
2F3 C2  C1  SING Y N 6  
2F3 C2  C8  SING Y N 7  
2F3 C1  N1  SING Y N 8  
2F3 C8  C7  DOUB Y N 9  
2F3 O3  C19 DOUB N N 10 
2F3 N1  C9  DOUB Y N 11 
2F3 C7  C9  SING Y N 12 
2F3 C7  C20 SING N N 13 
2F3 O1  C19 SING N N 14 
2F3 C19 C15 SING N N 15 
2F3 C20 N2  SING N N 16 
2F3 O2  C21 DOUB N N 17 
2F3 C15 N2  SING Y N 18 
2F3 C15 C16 DOUB Y N 19 
2F3 N2  C14 SING Y N 20 
2F3 C21 N3  SING N N 21 
2F3 C21 C10 SING N N 22 
2F3 N3  C22 SING N N 23 
2F3 C16 C10 SING N N 24 
2F3 C16 C13 SING Y N 25 
2F3 C10 C24 DOUB N N 26 
2F3 C14 C18 DOUB Y N 27 
2F3 C14 C13 SING Y N 28 
2F3 C22 C23 DOUB N N 29 
2F3 C18 C17 SING Y N 30 
2F3 C13 C11 DOUB Y N 31 
2F3 C24 C23 SING N N 32 
2F3 C17 F1  SING N N 33 
2F3 C17 C12 DOUB Y N 34 
2F3 C11 C12 SING Y N 35 
2F3 C12 C25 SING N N 36 
2F3 C3  H1  SING N N 37 
2F3 C8  H2  SING N N 38 
2F3 C11 H4  SING N N 39 
2F3 C20 H5  SING N N 40 
2F3 C20 H6  SING N N 41 
2F3 C22 H7  SING N N 42 
2F3 C24 H8  SING N N 43 
2F3 C4  H9  SING N N 44 
2F3 C5  H10 SING N N 45 
2F3 C6  H11 SING N N 46 
2F3 C18 H12 SING N N 47 
2F3 O1  H13 SING N N 48 
2F3 N3  H14 SING N N 49 
2F3 C23 H15 SING N N 50 
2F3 C25 H16 SING N N 51 
2F3 C25 H17 SING N N 52 
2F3 C25 H18 SING N N 53 
2F3 C9  CL1 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2F3 SMILES           ACDLabs              12.01 "O=C5NC=CC=C5c2c1cc(c(F)cc1n(c2C(=O)O)Cc3cc4ccccc4nc3Cl)C"                                                                                                            
2F3 InChI            InChI                1.03  "InChI=1S/C25H17ClFN3O3/c1-13-9-17-20(11-18(13)27)30(12-15-10-14-5-2-3-7-19(14)29-23(15)26)22(25(32)33)21(17)16-6-4-8-28-24(16)31/h2-11H,12H2,1H3,(H,28,31)(H,32,33)" 
2F3 InChIKey         InChI                1.03  UZVPIJMLVISXHS-UHFFFAOYSA-N                                                                                                                                           
2F3 SMILES_CANONICAL CACTVS               3.385 "Cc1cc2c(cc1F)n(Cc3cc4ccccc4nc3Cl)c(C(O)=O)c2C5=CC=CNC5=O"                                                                                                            
2F3 SMILES           CACTVS               3.385 "Cc1cc2c(cc1F)n(Cc3cc4ccccc4nc3Cl)c(C(O)=O)c2C5=CC=CNC5=O"                                                                                                            
2F3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1cc2c(cc1F)n(c(c2C3=CC=CNC3=O)C(=O)O)Cc4cc5ccccc5nc4Cl"                                                                                                            
2F3 SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1cc2c(cc1F)n(c(c2C3=CC=CNC3=O)C(=O)O)Cc4cc5ccccc5nc4Cl"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2F3 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid"     
2F3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[(2-chloranylquinolin-3-yl)methyl]-6-fluoranyl-5-methyl-3-(2-oxidanylidene-1H-pyridin-3-yl)indole-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2F3 "Create component" 2013-10-07 RCSB 
2F3 "Initial release"  2013-12-11 RCSB 
2F3 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            2F3 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C9 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
