data_AV3
#

_chem_comp.id                                   AV3
_chem_comp.name                                 "4-[(4-fluoro-2-methyl-3H-indol-5-yl)oxy]-6-methoxy-7-[3-(pyrrolidin-1-yl)propoxy]quinazoline"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H27 F N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Cediranib
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-11-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       450.505
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AV3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6IPR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AV3  C01   C1   C  0  1  Y  N  N  242.979  -44.529  391.271   -6.183   0.174  -0.395  C01   AV3   1  
AV3  C02   C2   C  0  1  Y  N  N  239.255  -40.485  389.171   -0.470  -0.198   0.102  C02   AV3   2  
AV3  C03   C3   C  0  1  Y  N  N  240.202  -41.499  389.204   -1.849   0.083   0.222  C03   AV3   3  
AV3  C04   C4   C  0  1  Y  N  N  241.979  -44.928  392.134   -6.729   0.081   0.888  C04   AV3   4  
AV3  C05   C5   C  0  1  Y  N  N  242.776  -43.364  390.519   -4.870  -0.151  -0.631  C05   AV3   5  
AV3  C06   C6   C  0  1  Y  N  N  238.151  -40.669  388.356    0.442   0.887   0.145  C06   AV3   6  
AV3  C07   C7   C  0  1  N  N  N  244.102  -45.445  391.341   -7.313   0.667  -1.270  C07   AV3   7  
AV3  C08   C8   C  0  1  Y  N  N  239.367  -39.302  389.913    0.011  -1.505  -0.052  C08   AV3   8  
AV3  C09   C9   C  0  1  Y  N  N  241.574  -42.628  390.641   -4.066  -0.587   0.419  C09   AV3   9  
AV3  C10   C10  C  0  1  N  N  N  243.646  -46.387  392.290   -8.466   0.809  -0.296  C10   AV3  10  
AV3  C11   C11  C  0  1  Y  N  N  237.155  -39.716  388.271    1.815   0.637   0.028  C11   AV3  11  
AV3  C12   C12  C  0  1  Y  N  N  238.357  -38.338  389.829    1.355  -1.720  -0.163  C12   AV3  12  
AV3  C13   C13  C  0  1  Y  N  N  237.256  -38.546  388.989    2.258  -0.647  -0.125  C13   AV3  13  
AV3  C14   C14  C  0  1  Y  N  N  238.951  -42.754  387.680   -1.335   2.330   0.395  C14   AV3  14  
AV3  C15   C15  C  0  1  Y  N  N  240.778  -44.207  392.253   -5.912  -0.356   1.937  C15   AV3  15  
AV3  C16   C16  C  0  1  Y  N  N  240.575  -43.065  391.501   -4.597  -0.690   1.697  C16   AV3  16  
AV3  C17   C17  C  0  1  N  N  N  234.957  -34.981  387.010    6.843   0.992  -0.276  C17   AV3  17  
AV3  C18   C18  C  0  1  N  N  N  236.082  -35.983  387.238    5.911  -0.220  -0.331  C18   AV3  18  
AV3  C19   C19  C  0  1  N  N  N  244.568  -47.533  392.620   -9.861   1.273  -0.631  C19   AV3  19  
AV3  C20   C20  C  0  1  N  N  N  234.521  -32.605  387.140    9.148   1.701  -0.606  C20   AV3  20  
AV3  C21   C21  C  0  1  N  N  N  234.870  -33.876  389.174    8.698  -0.133   0.817  C21   AV3  21  
AV3  C22   C22  C  0  1  N  N  N  235.589  -37.380  387.609    4.460   0.245  -0.188  C22   AV3  22  
AV3  C23   C23  C  0  1  N  N  N  239.274  -37.153  391.786    0.855  -4.038  -0.343  C23   AV3  23  
AV3  C24   C24  C  0  1  N  N  N  234.253  -32.524  389.581   10.192   0.201   0.983  C24   AV3  24  
AV3  C25   C25  C  0  1  N  N  N  233.789  -31.876  388.270   10.532   1.130  -0.205  C25   AV3  25  
AV3  F01   F1   F  0  1  N  N  N  243.745  -42.976  389.688   -4.360  -0.049  -1.878  F01   AV3  26  
AV3  N01   N1   N  0  1  N  N  N  242.421  -46.070  392.748   -8.042   0.462   0.865  N01   AV3  27  
AV3  N02   N2   N  0  1  Y  N  N  240.020  -42.607  388.464   -2.221   1.347   0.365  N02   AV3  28  
AV3  N03   N3   N  0  1  Y  N  N  238.020  -41.795  387.630   -0.042   2.129   0.298  N03   AV3  29  
AV3  N04   N4   N  0  1  N  N  N  235.251  -33.744  387.752    8.235   0.545  -0.413  N04   AV3  30  
AV3  O01   O1   O  0  1  N  N  N  241.323  -41.483  389.929   -2.766  -0.911   0.193  O01   AV3  31  
AV3  O02   O2   O  0  1  N  N  N  236.210  -37.668  388.852    3.590  -0.888  -0.238  O02   AV3  32  
AV3  O03   O3   O  0  1  N  N  N  238.494  -37.193  390.584    1.824  -2.987  -0.312  O03   AV3  33  
AV3  H1    H1   H  0  1  N  N  N  244.294  -45.918  390.367   -7.064   1.631  -1.714  H1    AV3  34  
AV3  H071  H2   H  0  0  N  N  N  245.013  -44.936  391.688   -7.550  -0.064  -2.043  H071  AV3  35  
AV3  H081  H3   H  0  0  N  N  N  240.227  -39.136  390.545   -0.677  -2.338  -0.081  H081  AV3  36  
AV3  H111  H4   H  0  0  N  N  N  236.296  -39.889  387.640    2.520   1.454   0.060  H111  AV3  37  
AV3  H141  H5   H  0  0  N  N  N  238.837  -43.648  387.085   -1.692   3.343   0.513  H141  AV3  38  
AV3  H151  H6   H  0  0  N  N  N  240.012  -44.546  392.934   -6.314  -0.434   2.937  H151  AV3  39  
AV3  H161  H7   H  0  0  N  N  N  239.648  -42.517  391.582   -3.973  -1.028   2.511  H161  AV3  40  
AV3  H171  H8   H  0  0  N  N  N  234.877  -34.756  385.936    6.598   1.675  -1.090  H171  AV3  41  
AV3  H172  H9   H  0  0  N  N  N  234.008  -35.407  387.367    6.717   1.504   0.678  H172  AV3  42  
AV3  H182  H10  H  0  0  N  N  N  236.675  -36.057  386.314    6.036  -0.733  -1.285  H182  AV3  43  
AV3  H181  H11  H  0  0  N  N  N  236.719  -35.611  388.054    6.155  -0.903   0.483  H181  AV3  44  
AV3  H193  H12  H  0  0  N  N  N  244.093  -48.182  393.371  -10.475   0.413  -0.900  H193  AV3  45  
AV3  H192  H13  H  0  0  N  N  N  244.770  -48.115  391.709  -10.295   1.773   0.234  H192  AV3  46  
AV3  H191  H14  H  0  0  N  N  N  245.513  -47.139  393.021   -9.821   1.967  -1.470  H191  AV3  47  
AV3  H201  H15  H  0  0  N  N  N  235.231  -31.923  386.649    8.868   2.526   0.049  H201  AV3  48  
AV3  H202  H16  H  0  0  N  N  N  233.797  -32.976  386.400    9.151   2.020  -1.648  H202  AV3  49  
AV3  H212  H17  H  0  0  N  N  N  234.134  -34.684  389.298    8.568  -1.211   0.718  H212  AV3  50  
AV3  H211  H18  H  0  0  N  N  N  235.757  -34.091  389.788    8.138   0.230   1.678  H211  AV3  51  
AV3  H221  H19  H  0  0  N  N  N  234.494  -37.389  387.712    4.335   0.757   0.766  H221  AV3  52  
AV3  H222  H20  H  0  0  N  N  N  235.892  -38.112  386.846    4.216   0.928  -1.002  H222  AV3  53  
AV3  H231  H21  H  0  0  N  N  N  239.237  -36.140  392.214    0.293  -4.041   0.591  H231  AV3  54  
AV3  H233  H22  H  0  0  N  N  N  238.867  -37.873  392.511    0.172  -3.878  -1.177  H233  AV3  55  
AV3  H232  H23  H  0  0  N  N  N  240.317  -37.416  391.555    1.361  -4.995  -0.466  H232  AV3  56  
AV3  H241  H24  H  0  0  N  N  N  235.004  -31.892  390.078   10.361   0.718   1.928  H241  AV3  57  
AV3  H242  H25  H  0  0  N  N  N  233.399  -32.679  390.257   10.791  -0.708   0.937  H242  AV3  58  
AV3  H252  H26  H  0  0  N  N  N  234.048  -30.807  388.262   10.968   0.562  -1.027  H252  AV3  59  
AV3  H251  H27  H  0  0  N  N  N  232.701  -31.991  388.154   11.202   1.930   0.111  H251  AV3  60  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AV3  C17  C18   SING  N  N   1  
AV3  C17  N04   SING  N  N   2  
AV3  C20  N04   SING  N  N   3  
AV3  C20  C25   SING  N  N   4  
AV3  C18  C22   SING  N  N   5  
AV3  C22  O02   SING  N  N   6  
AV3  N03  C14   DOUB  Y  N   7  
AV3  N03  C06   SING  Y  N   8  
AV3  C14  N02   SING  Y  N   9  
AV3  N04  C21   SING  N  N  10  
AV3  C25  C24   SING  N  N  11  
AV3  C11  C06   SING  Y  N  12  
AV3  C11  C13   DOUB  Y  N  13  
AV3  C06  C02   DOUB  Y  N  14  
AV3  N02  C03   DOUB  Y  N  15  
AV3  O02  C13   SING  N  N  16  
AV3  C13  C12   SING  Y  N  17  
AV3  C02  C03   SING  Y  N  18  
AV3  C02  C08   SING  Y  N  19  
AV3  C21  C24   SING  N  N  20  
AV3  C03  O01   SING  N  N  21  
AV3  F01  C05   SING  N  N  22  
AV3  C12  C08   DOUB  Y  N  23  
AV3  C12  O03   SING  N  N  24  
AV3  O01  C09   SING  N  N  25  
AV3  C05  C09   DOUB  Y  N  26  
AV3  C05  C01   SING  Y  N  27  
AV3  O03  C23   SING  N  N  28  
AV3  C09  C16   SING  Y  N  29  
AV3  C01  C07   SING  N  N  30  
AV3  C01  C04   DOUB  Y  N  31  
AV3  C07  C10   SING  N  N  32  
AV3  C16  C15   DOUB  Y  N  33  
AV3  C04  C15   SING  Y  N  34  
AV3  C04  N01   SING  N  N  35  
AV3  C10  C19   SING  N  N  36  
AV3  C10  N01   DOUB  N  N  37  
AV3  C07  H1    SING  N  N  38  
AV3  C07  H071  SING  N  N  39  
AV3  C08  H081  SING  N  N  40  
AV3  C11  H111  SING  N  N  41  
AV3  C14  H141  SING  N  N  42  
AV3  C15  H151  SING  N  N  43  
AV3  C16  H161  SING  N  N  44  
AV3  C17  H171  SING  N  N  45  
AV3  C17  H172  SING  N  N  46  
AV3  C18  H182  SING  N  N  47  
AV3  C18  H181  SING  N  N  48  
AV3  C19  H193  SING  N  N  49  
AV3  C19  H192  SING  N  N  50  
AV3  C19  H191  SING  N  N  51  
AV3  C20  H201  SING  N  N  52  
AV3  C20  H202  SING  N  N  53  
AV3  C21  H212  SING  N  N  54  
AV3  C21  H211  SING  N  N  55  
AV3  C22  H221  SING  N  N  56  
AV3  C22  H222  SING  N  N  57  
AV3  C23  H231  SING  N  N  58  
AV3  C23  H233  SING  N  N  59  
AV3  C23  H232  SING  N  N  60  
AV3  C24  H241  SING  N  N  61  
AV3  C24  H242  SING  N  N  62  
AV3  C25  H252  SING  N  N  63  
AV3  C25  H251  SING  N  N  64  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AV3  SMILES            ACDLabs               12.01  "c12CC(C)=Nc1ccc(c2F)Oc4c3cc(OC)c(cc3ncn4)OCCCN5CCCC5"  
AV3  InChI             InChI                 1.03   "InChI=1S/C25H27FN4O3/c1-16-12-17-19(29-16)6-7-21(24(17)26)33-25-18-13-22(31-2)23(14-20(18)27-15-28-25)32-11-5-10-30-8-3-4-9-30/h6-7,13-15H,3-5,8-12H2,1-2H3"  
AV3  InChIKey          InChI                 1.03   ZOVVOYNGCNKFNN-UHFFFAOYSA-N  
AV3  SMILES_CANONICAL  CACTVS                3.385  "COc1cc2c(Oc3ccc4N=C(C)Cc4c3F)ncnc2cc1OCCCN5CCCC5"  
AV3  SMILES            CACTVS                3.385  "COc1cc2c(Oc3ccc4N=C(C)Cc4c3F)ncnc2cc1OCCCN5CCCC5"  
AV3  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC1=Nc2ccc(c(c2C1)F)Oc3c4cc(c(cc4ncn3)OCCCN5CCCC5)OC"  
AV3  SMILES            "OpenEye OEToolkits"  2.0.6  "CC1=Nc2ccc(c(c2C1)F)Oc3c4cc(c(cc4ncn3)OCCCN5CCCC5)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AV3  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-[(4-fluoro-2-methyl-3H-indol-5-yl)oxy]-6-methoxy-7-[3-(pyrrolidin-1-yl)propoxy]quinazoline"  
AV3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "4-[(4-fluoranyl-2-methyl-3~{H}-indol-5-yl)oxy]-6-methoxy-7-(3-pyrrolidin-1-ylpropoxy)quinazoline"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AV3  "Create component"  2018-11-26  PDBJ  
AV3  "Initial release"   2020-01-01  RCSB  
AV3  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     AV3
_pdbx_chem_comp_synonyms.name        Cediranib
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
