data_VR3
# 
_chem_comp.id                                    VR3 
_chem_comp.name                                  "[(3~{S},8~{S},9~{S},10~{R},13~{S},14~{S})-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H31 N O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-29 
_chem_comp.pdbx_modified_date                    2024-04-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        353.519 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VR3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OKO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VR3 C1  C1  C 0 1 N N N N N N -3.190 4.345  13.803 1.953  1.838  0.169  C1  VR3 1  
VR3 C2  C2  C 0 1 N N S N N N -4.094 4.398  15.001 2.658  0.483  0.079  C2  VR3 2  
VR3 C3  C3  C 0 1 N N N N N N -5.168 5.474  14.732 1.884  -0.432 -0.875 C3  VR3 3  
VR3 C4  C4  C 0 1 N N N N N N -4.544 6.740  14.447 0.445  -0.517 -0.396 C4  VR3 4  
VR3 C5  C5  C 0 1 N N R N N N -3.402 6.806  13.533 -0.284 0.768  -0.134 C5  VR3 5  
VR3 C6  C6  C 0 1 N N N N N N -5.055 7.901  15.017 -0.084 -1.695 -0.241 C6  VR3 6  
VR3 C7  C7  C 0 1 N N S N N N -2.570 8.125  13.797 -1.664 0.565  0.469  C7  VR3 7  
VR3 C8  C8  C 0 1 N N N N N N -4.483 9.222  14.881 -1.493 -1.903 0.234  C8  VR3 8  
VR3 C9  C9  C 0 1 N N S N N N -3.526 9.324  13.732 -2.341 -0.669 -0.144 C9  VR3 9  
VR3 C10 C10 C 0 1 N N N N N N -2.460 5.636  13.788 0.563  1.656  0.782  C10 VR3 10 
VR3 C11 C11 C 0 1 N N N N N N -1.360 8.227  12.856 -2.506 1.821  0.264  C11 VR3 11 
VR3 C12 C12 C 0 1 N N S N N N -2.652 10.617 13.889 -3.718 -0.795 0.483  C12 VR3 12 
VR3 C13 C13 C 0 1 N N S N N N -1.620 10.767 12.817 -4.532 0.459  0.064  C13 VR3 13 
VR3 C14 C14 C 0 1 N N N N N N -0.639 9.569  12.921 -3.939 1.638  0.787  C14 VR3 14 
VR3 C15 C15 C 0 1 N N N N N N -2.183 10.890 11.396 -4.422 0.669  -1.448 C15 VR3 15 
VR3 C16 C16 C 0 1 N N N N N N -1.003 12.143 13.246 -5.964 0.086  0.432  C16 VR3 16 
VR3 C17 C17 C 0 1 N N N N N N -3.421 11.961 13.833 -4.588 -1.941 -0.044 C17 VR3 17 
VR3 C18 C18 C 0 1 N N N N N N -2.241 12.972 13.657 -6.031 -1.456 0.309  C18 VR3 18 
VR3 C   C19 C 0 1 N N N N N N -3.928 6.727  12.043 -0.449 1.488  -1.474 C   VR3 19 
VR3 O25 O1  O 0 1 N N N N N N -4.714 3.044  15.166 3.987  0.669  -0.412 O25 VR3 20 
VR3 S22 S1  S 0 1 N N N N N N -5.361 2.609  16.525 5.009  -0.285 0.190  S22 VR3 21 
VR3 O20 O2  O 0 1 N N N N N N -6.814 3.070  16.524 6.284  0.165  -0.248 O20 VR3 22 
VR3 O21 O3  O 0 1 N N N N N N -4.602 3.088  17.686 4.664  -0.430 1.560  O21 VR3 23 
VR3 N19 N1  N 0 1 N N N N N N -5.172 1.102  16.395 4.769  -1.766 -0.512 N19 VR3 24 
VR3 H1  H1  H 0 1 N N N N N N -3.781 4.229  12.882 2.540  2.511  0.794  H1  VR3 25 
VR3 H2  H2  H 0 1 N N N N N N -2.483 3.507  13.893 1.856  2.263  -0.830 H2  VR3 26 
VR3 H3  H3  H 0 1 N N N N N N -3.519 4.666  15.900 2.697  0.027  1.068  H3  VR3 27 
VR3 H4  H4  H 0 1 N N N N N N -5.809 5.577  15.620 1.912  -0.018 -1.883 H4  VR3 28 
VR3 H5  H5  H 0 1 N N N N N N -5.780 5.169  13.871 2.332  -1.426 -0.874 H5  VR3 29 
VR3 H6  H6  H 0 1 N N N N N N -5.953 7.808  15.610 0.518  -2.563 -0.463 H6  VR3 30 
VR3 H7  H7  H 0 1 N N N N N N -2.186 8.063  14.826 -1.550 0.398  1.540  H7  VR3 31 
VR3 H8  H8  H 0 1 N N N N N N -3.946 9.470  15.809 -1.911 -2.789 -0.244 H8  VR3 32 
VR3 H9  H9  H 0 1 N N N N N N -5.298 9.944  14.725 -1.497 -2.037 1.316  H9  VR3 33 
VR3 H10 H10 H 0 1 N N N N N N -4.060 9.342  12.771 -2.428 -0.554 -1.224 H10 VR3 34 
VR3 H11 H11 H 0 1 N N N N N N -1.701 5.608  12.993 0.656  1.185  1.761  H11 VR3 35 
VR3 H12 H12 H 0 1 N N N N N N -1.967 5.779  14.761 0.084  2.629  0.890  H12 VR3 36 
VR3 H13 H13 H 0 1 N N N N N N -1.709 8.071  11.825 -2.039 2.652  0.792  H13 VR3 37 
VR3 H14 H14 H 0 1 N N N N N N -0.644 7.436  13.125 -2.543 2.054  -0.800 H14 VR3 38 
VR3 H15 H15 H 0 1 N N N N N N -2.141 10.559 14.862 -3.636 -0.849 1.569  H15 VR3 39 
VR3 H16 H16 H 0 1 N N N N N N 0.079  9.626  12.090 -3.921 1.448  1.861  H16 VR3 40 
VR3 H17 H17 H 0 1 N N N N N N -0.099 9.635  13.877 -4.529 2.530  0.577  H17 VR3 41 
VR3 H18 H18 H 0 1 N N N N N N -2.874 11.744 11.348 -3.372 0.760  -1.727 H18 VR3 42 
VR3 H19 H19 H 0 1 N N N N N N -1.357 11.046 10.687 -4.864 -0.182 -1.966 H19 VR3 43 
VR3 H20 H20 H 0 1 N N N N N N -2.722 9.967  11.134 -4.952 1.580  -1.727 H20 VR3 44 
VR3 H21 H21 H 0 1 N N N N N N -0.312 12.019 14.093 -6.183 0.394  1.454  H21 VR3 45 
VR3 H22 H22 H 0 1 N N N N N N -0.472 12.616 12.407 -6.665 0.551  -0.261 H22 VR3 46 
VR3 H23 H23 H 0 1 N N N N N N -3.977 12.147 14.763 -4.468 -2.053 -1.121 H23 VR3 47 
VR3 H24 H24 H 0 1 N N N N N N -4.113 11.995 12.979 -4.349 -2.873 0.468  H24 VR3 48 
VR3 H25 H25 H 0 1 N N N N N N -2.048 13.498 14.604 -6.346 -1.894 1.256  H25 VR3 49 
VR3 H26 H26 H 0 1 N N N N N N -2.484 13.705 12.873 -6.724 -1.739 -0.484 H26 VR3 50 
VR3 H27 H27 H 0 1 N N N N N N -4.610 7.568  11.849 0.531  1.658  -1.918 H27 VR3 51 
VR3 H28 H28 H 0 1 N N N N N N -3.075 6.779  11.350 -1.050 0.874  -2.144 H28 VR3 52 
VR3 H29 H29 H 0 1 N N N N N N -4.465 5.779  11.894 -0.947 2.444  -1.313 H29 VR3 53 
VR3 H30 H30 H 0 1 N N N N N N -5.542 0.648  17.206 4.071  -1.881 -1.175 H30 VR3 54 
VR3 H31 H31 H 0 1 N N N N N N -5.653 0.775  15.581 5.327  -2.518 -0.259 H31 VR3 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VR3 C15 C13 SING N N 1  
VR3 C   C5  SING N N 2  
VR3 C13 C14 SING N N 3  
VR3 C13 C16 SING N N 4  
VR3 C13 C12 SING N N 5  
VR3 C11 C14 SING N N 6  
VR3 C11 C7  SING N N 7  
VR3 C16 C18 SING N N 8  
VR3 C5  C10 SING N N 9  
VR3 C5  C7  SING N N 10 
VR3 C5  C4  SING N N 11 
VR3 C18 C17 SING N N 12 
VR3 C9  C7  SING N N 13 
VR3 C9  C12 SING N N 14 
VR3 C9  C8  SING N N 15 
VR3 C10 C1  SING N N 16 
VR3 C1  C2  SING N N 17 
VR3 C17 C12 SING N N 18 
VR3 C4  C3  SING N N 19 
VR3 C4  C6  DOUB N N 20 
VR3 C3  C2  SING N N 21 
VR3 C8  C6  SING N N 22 
VR3 C2  O25 SING N N 23 
VR3 O25 S22 SING N N 24 
VR3 N19 S22 SING N N 25 
VR3 O20 S22 DOUB N N 26 
VR3 S22 O21 DOUB N N 27 
VR3 C1  H1  SING N N 28 
VR3 C1  H2  SING N N 29 
VR3 C2  H3  SING N N 30 
VR3 C3  H4  SING N N 31 
VR3 C3  H5  SING N N 32 
VR3 C6  H6  SING N N 33 
VR3 C7  H7  SING N N 34 
VR3 C8  H8  SING N N 35 
VR3 C8  H9  SING N N 36 
VR3 C9  H10 SING N N 37 
VR3 C10 H11 SING N N 38 
VR3 C10 H12 SING N N 39 
VR3 C11 H13 SING N N 40 
VR3 C11 H14 SING N N 41 
VR3 C12 H15 SING N N 42 
VR3 C14 H16 SING N N 43 
VR3 C14 H17 SING N N 44 
VR3 C15 H18 SING N N 45 
VR3 C15 H19 SING N N 46 
VR3 C15 H20 SING N N 47 
VR3 C16 H21 SING N N 48 
VR3 C16 H22 SING N N 49 
VR3 C17 H23 SING N N 50 
VR3 C17 H24 SING N N 51 
VR3 C18 H25 SING N N 52 
VR3 C18 H26 SING N N 53 
VR3 C   H27 SING N N 54 
VR3 C   H28 SING N N 55 
VR3 C   H29 SING N N 56 
VR3 N19 H30 SING N N 57 
VR3 N19 H31 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VR3 InChI            InChI                1.06  "InChI=1S/C19H31NO3S/c1-18-9-3-4-16(18)15-6-5-13-12-14(23-24(20,21)22)7-11-19(13,2)17(15)8-10-18/h5,14-17H,3-4,6-12H2,1-2H3,(H2,20,21,22)/t14-,15-,16-,17-,18-,19-/m0/s1" 
VR3 InChIKey         InChI                1.06  YUEPLWPAJBAOGC-DYKIIFRCSA-N                                                                                                                                               
VR3 SMILES_CANONICAL CACTVS               3.385 "C[C@@]12CCC[C@H]1[C@@H]3CC=C4C[C@H](CC[C@]4(C)[C@H]3CC2)O[S](N)(=O)=O"                                                                                                   
VR3 SMILES           CACTVS               3.385 "C[C]12CCC[CH]1[CH]3CC=C4C[CH](CC[C]4(C)[CH]3CC2)O[S](N)(=O)=O"                                                                                                           
VR3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]12CCC[C@H]1[C@@H]3CC=C4C[C@H](CC[C@@]4([C@H]3CC2)C)OS(=O)(=O)N"                                                                                                    
VR3 SMILES           "OpenEye OEToolkits" 2.0.7 "CC12CCCC1C3CC=C4CC(CCC4(C3CC2)C)OS(=O)(=O)N"                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           VR3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(3~{S},8~{S},9~{S},10~{R},13~{S},14~{S})-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VR3 "Create component" 2023-03-29 PDBE 
VR3 "Initial release"  2024-04-10 RCSB 
# 
