data_GP4
#

_chem_comp.id                                   GP4
_chem_comp.name                                 2-amino-2-deoxy-4-O-phosphono-alpha-D-glucopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H14 N O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;GLUCOSAMINE 4-PHOSPHATE; N-acetyl-4-O-phosphono-alpha-D-glucosamine; 2-amino-2-deoxy-4-O-phosphono-alpha-D-glucose;
2-amino-2-deoxy-4-O-phosphono-D-glucose; 2-amino-2-deoxy-4-O-phosphono-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-09-30
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       259.151
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GP4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1FCP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GP4  "GLUCOSAMINE 4-PHOSPHATE"                        PDB  ?  
2  GP4  N-acetyl-4-O-phosphono-alpha-D-glucosamine       PDB  ?  
3  GP4  2-amino-2-deoxy-4-O-phosphono-alpha-D-glucose    PDB  ?  
4  GP4  2-amino-2-deoxy-4-O-phosphono-D-glucose          PDB  ?  
5  GP4  2-amino-2-deoxy-4-O-phosphono-glucose            PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GP4  C1    C1A   C  0  1  N  N  S  54.771  71.557  54.843   0.216   0.321   2.822  C1    GP4   1  
GP4  C2    C2A   C  0  1  N  N  R  54.438  72.466  53.628  -1.172   0.515   2.209  C2    GP4   2  
GP4  C3    C3A   C  0  1  N  N  R  54.038  71.785  52.298  -1.286  -0.344   0.945  C3    GP4   3  
GP4  C4    C4A   C  0  1  N  N  S  54.793  70.457  52.099  -0.110  -0.014   0.019  C4    GP4   4  
GP4  C5    C5A   C  0  1  N  N  R  54.621  69.621  53.354   1.197  -0.167   0.797  C5    GP4   5  
GP4  C6    C6A   C  0  1  N  N  N  55.254  68.242  53.137   2.378   0.129  -0.129  C6    GP4   6  
GP4  N2    N2A   N  0  1  N  N  N  53.614  73.620  53.969  -2.198   0.105   3.177  N2    GP4   7  
GP4  O3    O3A   O  0  1  N  N  N  54.356  72.670  51.207  -2.517  -0.062   0.276  O3    GP4   8  
GP4  O4    O4A   O  0  1  N  N  N  54.244  69.738  50.971  -0.111  -0.908  -1.095  O4    GP4   9  
GP4  O6    O5A   O  0  1  N  N  N  55.212  67.494  54.366   3.601  -0.020   0.593  O6    GP4  10  
GP4  O5    O6A   O  0  1  N  N  N  55.256  70.260  54.477   1.216   0.742   1.895  O5    GP4  11  
GP4  O7A   O7A   O  0  1  N  N  N  54.647  68.628  48.875  -0.256  -0.949  -3.720  O7A   GP4  12  
GP4  P4A   P4A   P  0  1  N  N  N  55.235  69.571  49.863  -0.248  -0.001  -2.419  P4A   GP4  13  
GP4  O8A   O8A   O  0  1  N  N  N  55.459  70.910  49.259   0.895   0.934  -2.497  O8A   GP4  14  
GP4  O9A   O9A   O  0  1  N  N  N  56.482  69.014  50.442  -1.623   0.834  -2.356  O9A   GP4  15  
GP4  O1    O1A   O  0  1  N  Y  N  53.707  71.547  55.801   0.410  -1.059   3.133  O1    GP4  16  
GP4  H1    H1    H  0  1  N  N  N  55.643  72.018  55.362   0.295   0.913   3.734  H1    GP4  17  
GP4  H2    H2    H  0  1  N  N  N  55.450  72.855  53.368  -1.313   1.564   1.950  H2    GP4  18  
GP4  H3    H3    H  0  1  N  N  N  52.944  71.567  52.328  -1.252  -1.399   1.218  H3    GP4  19  
GP4  H4    H4    H  0  1  N  N  N  55.872  70.661  51.905  -0.205   1.012  -0.336  H4    GP4  20  
GP4  H5    H5    H  0  1  N  N  N  53.531  69.514  53.566   1.279  -1.188   1.171  H5    GP4  21  
GP4  H61   H61   H  0  1  N  N  N  54.780  67.689  52.291   2.364  -0.565  -0.969  H61   GP4  22  
GP4  H62   H62   H  0  1  N  N  N  56.286  68.313  52.722   2.298   1.150  -0.502  H62   GP4  23  
GP4  HN2   HN21  H  0  1  N  N  N  53.395  74.216  53.171  -2.082   0.693   3.988  HN2   GP4  24  
GP4  HN22  HN22  H  0  0  N  N  N  54.045  74.162  54.717  -3.091   0.343   2.771  HN22  GP4  25  
GP4  HO3   HO3   H  0  1  N  Y  N  54.110  72.251  50.390  -3.228  -0.284   0.893  HO3   GP4  26  
GP4  HO6   HO5   H  0  1  N  Y  N  55.604  66.639  54.231   4.317   0.175  -0.025  HO6   GP4  27  
GP4  HOP1  HOP1  H  0  0  N  N  N  55.276  68.521  48.171  -0.340  -0.368  -4.488  HOP1  GP4  28  
GP4  HOP2  HOP2  H  0  0  N  N  N  57.111  68.907  49.738  -2.341   0.189  -2.306  HOP2  GP4  29  
GP4  HO1   HO1   H  0  1  N  Y  N  53.910  70.991  56.544   1.294  -1.138   3.516  HO1   GP4  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GP4  C1   C2    SING  N  N   1  
GP4  C1   O5    SING  N  N   2  
GP4  C1   O1    SING  N  N   3  
GP4  C1   H1    SING  N  N   4  
GP4  C2   C3    SING  N  N   5  
GP4  C2   N2    SING  N  N   6  
GP4  C2   H2    SING  N  N   7  
GP4  C3   C4    SING  N  N   8  
GP4  C3   O3    SING  N  N   9  
GP4  C3   H3    SING  N  N  10  
GP4  C4   C5    SING  N  N  11  
GP4  C4   O4    SING  N  N  12  
GP4  C4   H4    SING  N  N  13  
GP4  C5   C6    SING  N  N  14  
GP4  C5   O5    SING  N  N  15  
GP4  C5   H5    SING  N  N  16  
GP4  C6   O6    SING  N  N  17  
GP4  C6   H61   SING  N  N  18  
GP4  C6   H62   SING  N  N  19  
GP4  N2   HN2   SING  N  N  20  
GP4  N2   HN22  SING  N  N  21  
GP4  O3   HO3   SING  N  N  22  
GP4  O4   P4A   SING  N  N  23  
GP4  O6   HO6   SING  N  N  24  
GP4  O7A  P4A   SING  N  N  25  
GP4  O7A  HOP1  SING  N  N  26  
GP4  P4A  O8A   DOUB  N  N  27  
GP4  P4A  O9A   SING  N  N  28  
GP4  O9A  HOP2  SING  N  N  29  
GP4  O1   HO1   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GP4  SMILES            ACDLabs               10.04  "O=P(O)(O)OC1C(OC(O)C(N)C1O)CO"  
GP4  SMILES_CANONICAL  CACTVS                3.341  "N[C@H]1[C@@H](O)O[C@H](CO)[C@@H](O[P](O)(O)=O)[C@@H]1O"  
GP4  SMILES            CACTVS                3.341  "N[CH]1[CH](O)O[CH](CO)[CH](O[P](O)(O)=O)[CH]1O"  
GP4  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)N)O)OP(=O)(O)O)O"  
GP4  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)O)N)O)OP(=O)(O)O)O"  
GP4  InChI             InChI                 1.03   "InChI=1S/C6H14NO8P/c7-3-4(9)5(15-16(11,12)13)2(1-8)14-6(3)10/h2-6,8-10H,1,7H2,(H2,11,12,13)/t2-,3-,4-,5-,6+/m1/s1"  
GP4  InChIKey          InChI                 1.03   QWDBGVNDGYUIAC-UKFBFLRUSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GP4  "SYSTEMATIC NAME"            ACDLabs               10.04  2-amino-2-deoxy-4-O-phosphono-alpha-D-glucopyranose  
GP4  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "[(2R,3S,4R,5R,6S)-5-amino-4,6-dihydroxy-2-(hydroxymethyl)oxan-3-yl] dihydrogen phosphate"  
GP4  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    a-D-GlcpN4PO3  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GP4  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GP4  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GP4  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GP4  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GP4  "Create component"          1999-09-30  RCSB  
GP4  "Modify descriptor"         2011-06-04  RCSB  
GP4  "Other modification"        2020-07-03  RCSB  
GP4  "Modify name"               2020-07-17  RCSB  
GP4  "Modify synonyms"           2020-07-17  RCSB  
GP4  "Modify linking type"       2020-07-17  RCSB  
GP4  "Modify atom id"            2020-07-17  RCSB  
GP4  "Modify component atom id"  2020-07-17  RCSB  
GP4  "Modify leaving atom flag"  2020-07-17  RCSB  
##
