data_IX4
# 
_chem_comp.id                                    IX4 
_chem_comp.name                                  "~{N}-(1~{H}-imidazo[4,5-b]pyridin-2-ylmethyl)-3-(3-methyl-1,2-diazirin-3-yl)propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H14 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-03 
_chem_comp.pdbx_modified_date                    2024-02-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        258.279 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IX4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8Q34 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IX4 C4  C1  C 0 1 N N N N N N -5.849 -31.312 -5.066 2.910  -0.162 0.014  C4  IX4 1  
IX4 C5  C2  C 0 1 N N N N N N -5.041 -31.232 -3.788 1.829  0.884  -0.074 C5  IX4 2  
IX4 C6  C3  C 0 1 N N N N N N -3.052 -30.421 -2.641 -0.519 1.535  -0.125 C6  IX4 3  
IX4 C11 C4  C 0 1 Y N N N N N -6.010 -28.243 0.715  -4.892 -0.380 1.396  C11 IX4 4  
IX4 C7  C5  C 0 1 Y N N N N N -3.546 -29.555 -1.523 -1.869 0.869  -0.064 C7  IX4 5  
IX4 C8  C6  C 0 1 Y N N N N N -3.674 -28.028 -0.009 -3.684 -0.157 -0.682 C8  IX4 6  
IX4 C9  C7  C 0 1 Y N N N N N -4.456 -26.595 1.585  -5.753 -1.183 -0.687 C9  IX4 7  
IX4 C10 C8  C 0 1 Y N N N N N -5.733 -27.213 1.610  -5.896 -1.010 0.681  C10 IX4 8  
IX4 C12 C9  C 0 1 Y N N N N N -4.962 -28.658 -0.082 -3.769 0.057  0.706  C12 IX4 9  
IX4 N1  N1  N 0 1 N N N N N N -3.975 -30.410 -3.780 0.532  0.518  -0.039 N1  IX4 10 
IX4 N2  N2  N 0 1 Y N N N N N -2.835 -28.579 -0.930 -2.498 0.364  -1.085 N2  IX4 11 
IX4 C3  C10 C 0 1 N N N N N N -7.381 -31.159 -4.878 4.281  0.515  -0.048 C3  IX4 12 
IX4 N3  N3  N 0 1 Y N N N N N -3.447 -26.941 0.774  -4.676 -0.773 -1.321 N3  IX4 13 
IX4 C1  C11 C 0 1 N N N N N N -8.155 -28.612 -4.801 6.819  -0.036 -0.006 C1  IX4 14 
IX4 C2  C12 C 0 1 N N N N N N -7.884 -29.937 -4.084 5.378  -0.548 0.042  C2  IX4 15 
IX4 O1  O1  O 0 1 N N N N N N -5.377 -31.880 -2.810 2.126  2.056  -0.176 O1  IX4 16 
IX4 N4  N4  N 0 1 Y N N N N N -4.817 -29.653 -1.021 -2.607 0.707  1.066  N4  IX4 17 
IX4 N5  N5  N 0 1 N N N N N N -7.862 -29.923 -2.553 5.095  -1.893 -0.464 N5  IX4 18 
IX4 N6  N6  N 0 1 N N N N N N -9.011 -30.352 -3.105 5.098  -1.786 0.773  N6  IX4 19 
IX4 H6  H1  H 0 1 N N N N N N -5.657 -32.290 -5.531 2.815  -0.705 0.955  H6  IX4 20 
IX4 H7  H2  H 0 1 N N N N N N -5.505 -30.512 -5.739 2.810  -0.858 -0.818 H7  IX4 21 
IX4 H9  H3  H 0 1 N N N N N N -2.949 -31.453 -2.275 -0.423 2.078  -1.065 H9  IX4 22 
IX4 H10 H4  H 0 1 N N N N N N -2.071 -30.050 -2.973 -0.419 2.232  0.708  H10 IX4 23 
IX4 H13 H5  H 0 1 N N N N N N -6.990 -28.692 0.648  -4.982 -0.228 2.462  H13 IX4 24 
IX4 H11 H6  H 0 1 N N N N N N -4.284 -25.781 2.274  -6.538 -1.675 -1.242 H11 IX4 25 
IX4 H12 H7  H 0 1 N N N N N N -6.483 -26.888 2.316  -6.784 -1.363 1.184  H12 IX4 26 
IX4 H8  H8  H 0 1 N N N N N N -3.813 -29.793 -4.550 0.295  -0.419 0.043  H8  IX4 27 
IX4 H4  H10 H 0 1 N N N N N N -7.740 -32.060 -4.359 4.376  1.057  -0.988 H4  IX4 28 
IX4 H5  H11 H 0 1 N N N N N N -7.832 -31.109 -5.880 4.380  1.211  0.785  H5  IX4 29 
IX4 H1  H12 H 0 1 N N N N N N -8.505 -27.865 -4.073 6.991  0.644  0.828  H1  IX4 30 
IX4 H2  H13 H 0 1 N N N N N N -7.229 -28.256 -5.275 7.507  -0.879 0.065  H2  IX4 31 
IX4 H3  H14 H 0 1 N N N N N N -8.926 -28.763 -5.571 6.987  0.491  -0.946 H3  IX4 32 
IX4 H14 H15 H 0 1 N N N N N N -5.510 -30.323 -1.287 -2.362 0.995  1.959  H14 IX4 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IX4 C1  C2  SING N N 1  
IX4 C2  C3  SING N N 2  
IX4 C3  C4  SING N N 3  
IX4 C4  C5  SING N N 4  
IX4 C5  O1  DOUB N N 5  
IX4 C5  N1  SING N N 6  
IX4 N1  C6  SING N N 7  
IX4 C6  C7  SING N N 8  
IX4 C7  N2  DOUB Y N 9  
IX4 N2  C8  SING Y N 10 
IX4 C8  N3  DOUB Y N 11 
IX4 N3  C9  SING Y N 12 
IX4 C9  C10 DOUB Y N 13 
IX4 C10 C11 SING Y N 14 
IX4 C11 C12 DOUB Y N 15 
IX4 C12 N4  SING Y N 16 
IX4 C2  N5  SING N N 17 
IX4 N5  N6  DOUB N N 18 
IX4 C2  N6  SING N N 19 
IX4 C7  N4  SING Y N 20 
IX4 C8  C12 SING Y N 21 
IX4 C4  H6  SING N N 22 
IX4 C4  H7  SING N N 23 
IX4 C6  H9  SING N N 24 
IX4 C6  H10 SING N N 25 
IX4 C11 H13 SING N N 26 
IX4 C9  H11 SING N N 27 
IX4 C10 H12 SING N N 28 
IX4 N1  H8  SING N N 29 
IX4 C3  H4  SING N N 30 
IX4 C3  H5  SING N N 31 
IX4 C1  H1  SING N N 32 
IX4 C1  H2  SING N N 33 
IX4 C1  H3  SING N N 34 
IX4 N4  H14 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IX4 InChI            InChI                1.06  "InChI=1S/C12H14N6O/c1-12(17-18-12)5-4-10(19)14-7-9-15-8-3-2-6-13-11(8)16-9/h2-3,6H,4-5,7H2,1H3,(H,14,19)(H,13,15,16)" 
IX4 InChIKey         InChI                1.06  NHWWLVCZMAELEF-UHFFFAOYSA-N                                                                                            
IX4 SMILES_CANONICAL CACTVS               3.385 "CC1(CCC(=O)NCc2[nH]c3cccnc3n2)N=N1"                                                                                   
IX4 SMILES           CACTVS               3.385 "CC1(CCC(=O)NCc2[nH]c3cccnc3n2)N=N1"                                                                                   
IX4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(N=N1)CCC(=O)NCc2[nH]c3cccnc3n2"                                                                                   
IX4 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(N=N1)CCC(=O)NCc2[nH]c3cccnc3n2"                                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           IX4 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(1~{H}-imidazo[4,5-b]pyridin-2-ylmethyl)-3-(3-methyl-1,2-diazirin-3-yl)propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IX4 "Create component" 2023-08-03 PDBE 
IX4 "Initial release"  2024-02-07 RCSB 
# 
