data_JC4
#

_chem_comp.id                                   JC4
_chem_comp.name                                 "2'-(beta-D-galactopyranosyloxy)-5-nitro[1,1'-biphenyl]-3-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H19 N O10"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-08-29
_chem_comp.pdbx_modified_date                   2019-08-30
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       421.355
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JC4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6MAP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JC4  C10  C1   C   0  1  Y  N  N  29.329   7.796  -30.120  -0.367   4.286  -0.497  C10  JC4   1  
JC4  C13  C2   C   0  1  Y  N  N  29.142   6.696  -26.503  -1.996   0.906  -0.260  C13  JC4   2  
JC4  C15  C3   C   0  1  Y  N  N  29.591   6.292  -24.162  -4.175   0.062   0.324  C15  JC4   3  
JC4  C20  C4   C   0  1  Y  N  N  27.478   7.171  -24.825  -2.683  -1.276  -1.008  C20  JC4   4  
JC4  C24  C5   C   0  1  Y  N  N  27.876   7.150  -26.160  -1.732  -0.275  -0.954  C24  JC4   5  
JC4  O01  O1   O   0  1  N  N  N  28.642   0.885  -29.146   4.933   1.980  -1.613  O01  JC4   6  
JC4  C02  C6   C   0  1  N  N  N  29.838   0.823  -29.960   5.088   0.594  -1.300  C02  JC4   7  
JC4  C03  C7   C   0  1  N  N  R  30.984   1.548  -29.308   4.289   0.264  -0.038  C03  JC4   8  
JC4  O04  O2   O   0  1  N  N  N  30.478   2.843  -28.818   2.894   0.439  -0.298  O04  JC4   9  
JC4  C05  C8   C   0  1  N  N  S  31.535   3.699  -28.305   2.054   0.180   0.829  C05  JC4  10  
JC4  O06  O3   O   0  1  N  N  N  30.921   4.755  -27.693   0.690   0.409   0.469  O06  JC4  11  
JC4  C07  C9   C   0  1  Y  N  N  30.391   5.765  -28.543   0.342   1.683   0.152  C07  JC4  12  
JC4  C08  C10  C   0  1  Y  N  N  30.716   5.835  -29.905   1.289   2.694   0.195  C08  JC4  13  
JC4  C09  C11  C   0  1  Y  N  N  30.181   6.847  -30.693   0.934   3.989  -0.133  C09  JC4  14  
JC4  C11  C12  C   0  1  Y  N  N  29.009   7.726  -28.770  -1.323   3.290  -0.534  C11  JC4  15  
JC4  C12  C13  C   0  1  Y  N  N  29.537   6.712  -27.975  -0.975   1.981  -0.210  C12  JC4  16  
JC4  C14  C14  C   0  1  Y  N  N  30.004   6.278  -25.505  -3.219   1.076   0.380  C14  JC4  17  
JC4  C16  C15  C   0  1  N  N  N  30.538   5.814  -23.061  -5.477   0.234   1.002  C16  JC4  18  
JC4  O17  O4   O   0  1  N  N  N  30.290   6.122  -21.858  -6.399  -0.747   0.947  O17  JC4  19  
JC4  O18  O5   O   0  1  N  N  N  31.553   5.125  -23.355  -5.715   1.259   1.608  O18  JC4  20  
JC4  C19  C16  C   0  1  Y  N  N  28.333   6.742  -23.823  -3.899  -1.116  -0.375  C19  JC4  21  
JC4  N21  N1   N   1  1  N  N  N  26.194   7.645  -24.500  -2.396  -2.526  -1.746  N21  JC4  22  
JC4  O22  O6   O   0  1  N  N  N  25.693   7.377  -23.279  -3.232  -3.411  -1.794  O22  JC4  23  
JC4  O23  O7   O  -1  1  N  N  N  25.537   8.297  -25.307  -1.324  -2.671  -2.305  O23  JC4  24  
JC4  C25  C17  C   0  1  N  N  R  32.352   2.986  -27.240   2.228  -1.276   1.270  C25  JC4  25  
JC4  O26  O8   O   0  1  N  N  N  33.497   3.806  -26.936   1.433  -1.522   2.431  O26  JC4  26  
JC4  C27  C18  C   0  1  N  N  S  32.807   1.637  -27.669   3.703  -1.530   1.596  C27  JC4  27  
JC4  O28  O9   O   0  1  N  N  N  33.466   0.970  -26.554   3.887  -2.905   1.938  O28  JC4  28  
JC4  C29  C19  C   0  1  N  N  R  31.675   0.817  -28.172   4.552  -1.189   0.368  C29  JC4  29  
JC4  O30  O10  O   0  1  N  N  N  30.760   0.584  -27.084   4.201  -2.057  -0.711  O30  JC4  30  
JC4  H1   H1   H   0  1  N  N  N  28.918   8.587  -30.730  -0.637   5.301  -0.748  H1   JC4  31  
JC4  H2   H2   H   0  1  N  N  N  27.198   7.488  -26.930  -0.783  -0.407  -1.451  H2   JC4  32  
JC4  H3   H3   H   0  1  N  N  N  27.937   0.420  -29.582   5.413   2.261  -2.404  H3   JC4  33  
JC4  H4   H4   H   0  1  N  N  N  29.631   1.286  -30.936   4.721  -0.009  -2.131  H4   JC4  34  
JC4  H5   H5   H   0  1  N  N  N  30.118  -0.231  -30.106   6.142   0.376  -1.130  H5   JC4  35  
JC4  H6   H6   H   0  1  N  N  N  31.739   1.747  -30.083   4.594   0.928   0.770  H6   JC4  36  
JC4  H7   H7   H   0  1  N  N  N  32.197   4.026  -29.121   2.330   0.843   1.649  H7   JC4  37  
JC4  H8   H8   H   0  1  N  N  N  31.381   5.104  -30.341   2.307   2.468   0.475  H8   JC4  38  
JC4  H9   H9   H   0  1  N  N  N  30.423   6.900  -31.744   1.677   4.773  -0.106  H9   JC4  39  
JC4  H10  H10  H   0  1  N  N  N  28.348   8.461  -28.335  -2.339   3.526  -0.814  H10  JC4  40  
JC4  H11  H11  H   0  1  N  N  N  30.998   5.940  -25.759  -3.427   1.988   0.919  H11  JC4  41  
JC4  H12  H12  H   0  1  N  N  N  30.962   5.760  -21.293  -7.235  -0.589   1.406  H12  JC4  42  
JC4  H13  H13  H   0  1  N  N  N  28.018   6.760  -22.790  -4.638  -1.902  -0.419  H13  JC4  43  
JC4  H14  H14  H   0  1  N  N  N  31.729   2.880  -26.339   1.912  -1.940   0.465  H14  JC4  44  
JC4  H15  H15  H   0  1  N  N  N  34.025   3.380  -26.271   0.486  -1.375   2.298  H15  JC4  45  
JC4  H16  H16  H   0  1  N  N  N  33.534   1.761  -28.485   4.004  -0.902   2.435  H16  JC4  46  
JC4  H17  H17  H   0  1  N  N  N  34.186   1.506  -26.244   3.372  -3.192   2.704  H17  JC4  47  
JC4  H18  H18  H   0  1  N  N  N  32.061  -0.142  -28.549   5.608  -1.314   0.609  H18  JC4  48  
JC4  H19  H19  H   0  1  N  N  N  31.210   0.126  -26.384   4.343  -2.995  -0.524  H19  JC4  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JC4  C09  C10  DOUB  Y  N   1  
JC4  C09  C08  SING  Y  N   2  
JC4  C10  C11  SING  Y  N   3  
JC4  C02  C03  SING  N  N   4  
JC4  C02  O01  SING  N  N   5  
JC4  C08  C07  DOUB  Y  N   6  
JC4  C03  O04  SING  N  N   7  
JC4  C03  C29  SING  N  N   8  
JC4  O04  C05  SING  N  N   9  
JC4  C11  C12  DOUB  Y  N  10  
JC4  C07  C12  SING  Y  N  11  
JC4  C07  O06  SING  N  N  12  
JC4  C05  O06  SING  N  N  13  
JC4  C05  C25  SING  N  N  14  
JC4  C29  C27  SING  N  N  15  
JC4  C29  O30  SING  N  N  16  
JC4  C12  C13  SING  N  N  17  
JC4  C27  C25  SING  N  N  18  
JC4  C27  O28  SING  N  N  19  
JC4  C25  O26  SING  N  N  20  
JC4  C13  C24  DOUB  Y  N  21  
JC4  C13  C14  SING  Y  N  22  
JC4  C24  C20  SING  Y  N  23  
JC4  C14  C15  DOUB  Y  N  24  
JC4  O23  N21  SING  N  N  25  
JC4  C20  N21  SING  N  N  26  
JC4  C20  C19  DOUB  Y  N  27  
JC4  N21  O22  DOUB  N  N  28  
JC4  C15  C19  SING  Y  N  29  
JC4  C15  C16  SING  N  N  30  
JC4  O18  C16  DOUB  N  N  31  
JC4  C16  O17  SING  N  N  32  
JC4  C10  H1   SING  N  N  33  
JC4  C24  H2   SING  N  N  34  
JC4  O01  H3   SING  N  N  35  
JC4  C02  H4   SING  N  N  36  
JC4  C02  H5   SING  N  N  37  
JC4  C03  H6   SING  N  N  38  
JC4  C05  H7   SING  N  N  39  
JC4  C08  H8   SING  N  N  40  
JC4  C09  H9   SING  N  N  41  
JC4  C11  H10  SING  N  N  42  
JC4  C14  H11  SING  N  N  43  
JC4  O17  H12  SING  N  N  44  
JC4  C19  H13  SING  N  N  45  
JC4  C25  H14  SING  N  N  46  
JC4  O26  H15  SING  N  N  47  
JC4  C27  H16  SING  N  N  48  
JC4  O28  H17  SING  N  N  49  
JC4  C29  H18  SING  N  N  50  
JC4  O30  H19  SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JC4  SMILES            ACDLabs               12.01  "c3cc(c1cc([N+](=O)[O-])cc(C(O)=O)c1)c(OC2OC(CO)C(C(C2O)O)O)cc3"  
JC4  InChI             InChI                 1.03   "InChI=1S/C19H19NO10/c21-8-14-15(22)16(23)17(24)19(30-14)29-13-4-2-1-3-12(13)9-5-10(18(25)26)7-11(6-9)20(27)28/h1-7,14-17,19,21-24H,8H2,(H,25,26)/t14-,15+,16+,17-,19-/m1/s1"  
JC4  InChIKey          InChI                 1.03   GCARVRRYRBFOAI-DIKXUDHVSA-N  
JC4  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](Oc2ccccc2c3cc(cc(c3)[N+]([O-])=O)C(O)=O)[C@H](O)[C@@H](O)[C@H]1O"  
JC4  SMILES            CACTVS                3.385  "OC[CH]1O[CH](Oc2ccccc2c3cc(cc(c3)[N+]([O-])=O)C(O)=O)[CH](O)[CH](O)[CH]1O"  
JC4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccc(c(c1)c2cc(cc(c2)[N+](=O)[O-])C(=O)O)O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O"  
JC4  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccc(c(c1)c2cc(cc(c2)[N+](=O)[O-])C(=O)O)OC3C(C(C(C(O3)CO)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JC4  "SYSTEMATIC NAME"  ACDLabs               12.01  "2'-(beta-D-galactopyranosyloxy)-5-nitro[1,1'-biphenyl]-3-carboxylic acid"  
JC4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "3-[2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]-5-nitro-benzoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JC4  "Create component"  2018-08-29  RCSB  
JC4  "Initial release"   2019-09-04  RCSB  
##
