data_PD4
# 
_chem_comp.id                                    PD4 
_chem_comp.name                                  "6-(6-methoxypyridin-3-yl)-2-[(2-morpholin-4-ylethyl)amino]-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H32 N6 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-05-13 
_chem_comp.pdbx_modified_date                    2011-08-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        468.549 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PD4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3HC8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PD4 C    C    C 0 1 Y N N 17.234 -5.882  12.869 -2.897 -1.163 -0.057 C    PD4 1  
PD4 C1   C1   C 0 1 Y N N 17.377 -5.628  14.233 -2.100 -2.226 0.377  C1   PD4 2  
PD4 C2   C2   C 0 1 Y N N 18.283 -6.381  14.992 -0.739 -2.129 0.291  C2   PD4 3  
PD4 C3   C3   C 0 1 Y N N 19.035 -7.377  14.372 -0.183 -0.951 -0.237 C3   PD4 4  
PD4 C4   C4   C 0 1 Y N N 18.871 -7.607  12.995 -1.042 0.082  -0.657 C4   PD4 5  
PD4 N    N    N 0 1 Y N N 17.984 -6.853  12.323 -2.355 -0.059 -0.553 N    PD4 6  
PD4 N1   N1   N 0 1 N N N 19.920 -8.131  15.053 1.155  -0.821 -0.336 N1   PD4 7  
PD4 C5   C5   C 0 1 N N N 20.628 -9.102  14.432 1.690  0.269  -0.826 C5   PD4 8  
PD4 C6   C6   C 0 1 N N N 20.450 -9.320  13.053 0.826  1.375  -1.277 C6   PD4 9  
PD4 N2   N2   N 0 1 N N N 19.585 -8.549  12.351 -0.514 1.246  -1.178 N2   PD4 10 
PD4 O    O    O 0 1 N N N 21.150 -10.257 12.447 1.316  2.391  -1.734 O    PD4 11 
PD4 N3   N3   N 0 1 N N N 21.509 -9.874  15.093 3.066  0.383  -0.918 N3   PD4 12 
PD4 C7   C7   C 0 1 N N N 21.901 -9.844  16.508 3.924  -0.717 -0.469 C7   PD4 13 
PD4 C8   C8   C 0 1 N N N 20.873 -10.434 17.477 5.392  -0.337 -0.679 C8   PD4 14 
PD4 N4   N4   N 0 1 N N N 21.406 -10.811 18.827 6.252  -1.439 -0.229 N4   PD4 15 
PD4 C9   C9   C 0 1 N N N 21.727 -9.718  19.795 7.648  -1.216 -0.630 C9   PD4 16 
PD4 C10  C10  C 0 1 N N N 20.772 -9.784  20.997 8.497  -2.413 -0.193 C10  PD4 17 
PD4 O1   O1   O 0 1 N N N 20.721 -11.113 21.549 8.362  -2.597 1.219  O1   PD4 18 
PD4 C11  C11  C 0 1 N N N 20.329 -12.151 20.633 7.015  -2.818 1.644  C11  PD4 19 
PD4 C12  C12  C 0 1 N N N 21.220 -12.196 19.381 6.151  -1.625 1.226  C12  PD4 20 
PD4 C13  C13  C 0 1 Y N N 16.309 -5.186  11.947 -4.371 -1.275 0.032  C13  PD4 21 
PD4 C14  C14  C 0 1 Y N N 15.246 -4.398  12.397 -5.190 -0.223 -0.398 C14  PD4 22 
PD4 C15  C15  C 0 1 Y N N 14.377 -3.753  11.528 -6.559 -0.374 -0.295 C15  PD4 23 
PD4 C16  C16  C 0 1 Y N N 14.592 -3.946  10.174 -7.076 -1.554 0.227  C16  PD4 24 
PD4 N5   N5   N 0 1 Y N N 15.603 -4.723  9.731  -6.274 -2.530 0.624  N5   PD4 25 
PD4 C17  C17  C 0 1 Y N N 16.442 -5.344  10.572 -4.964 -2.430 0.539  C17  PD4 26 
PD4 C18  C18  C 0 1 N N N 19.378 -8.795  10.904 -1.397 2.329  -1.620 C18  PD4 27 
PD4 O2   O2   O 0 1 N N N 13.740 -3.326  9.377  -8.419 -1.708 0.330  O2   PD4 28 
PD4 C19  C19  C 0 1 N N N 20.569 -8.437  10.020 -1.662 3.279  -0.450 C19  PD4 29 
PD4 O3   O3   O 0 1 N N N 20.553 -7.029  9.907  -0.442 3.918  -0.069 O3   PD4 30 
PD4 C20  C20  C 0 1 N N N 21.523 -6.491  9.002  -0.580 4.832  1.021  C20  PD4 31 
PD4 C21  C21  C 0 1 N N N 21.235 -4.998  8.798  0.781  5.453  1.341  C21  PD4 32 
PD4 C22  C22  C 0 1 N N N 19.828 -4.712  8.269  0.633  6.431  2.508  C22  PD4 33 
PD4 C23  C23  C 0 1 N N N 13.939 -3.305  7.939  -8.891 -2.943 0.874  C23  PD4 34 
PD4 H1   H1   H 0 1 N N N 16.791 -4.853  14.703 -2.557 -3.119 0.779  H1   PD4 35 
PD4 H2   H2   H 0 1 N N N 18.397 -6.191  16.049 -0.105 -2.938 0.622  H2   PD4 36 
PD4 HN3  HN3  H 0 1 N N N 21.964 -10.571 14.539 3.463  1.190  -1.281 HN3  PD4 37 
PD4 H7   H7   H 0 1 N N N 22.829 -10.427 16.610 3.747  -0.907 0.590  H7   PD4 38 
PD4 H7A  H7A  H 0 1 N N N 22.059 -8.792  16.788 3.695  -1.615 -1.043 H7A  PD4 39 
PD4 H8   H8   H 0 1 N N N 20.088 -9.678  17.629 5.569  -0.147 -1.738 H8   PD4 40 
PD4 H8A  H8A  H 0 1 N N N 20.466 -11.345 17.015 5.621  0.561  -0.106 H8A  PD4 41 
PD4 H9   H9   H 0 1 N N N 22.763 -9.836  20.146 7.703  -1.106 -1.713 H9   PD4 42 
PD4 H9A  H9A  H 0 1 N N N 21.615 -8.745  19.295 8.024  -0.310 -0.152 H9A  PD4 43 
PD4 H10  H10  H 0 1 N N N 21.127 -9.089  21.773 8.156  -3.309 -0.712 H10  PD4 44 
PD4 H10A H10A H 0 0 N N N 19.763 -9.496  20.667 9.543  -2.226 -0.438 H10A PD4 45 
PD4 H11  H11  H 0 1 N N N 20.404 -13.119 21.150 6.631  -3.726 1.179  H11  PD4 46 
PD4 H11A H11A H 0 0 N N N 19.292 -11.964 20.317 6.988  -2.925 2.728  H11A PD4 47 
PD4 H12  H12  H 0 1 N N N 20.743 -12.830 18.619 6.502  -0.727 1.733  H12  PD4 48 
PD4 H12A H12A H 0 0 N N N 22.202 -12.614 19.649 5.113  -1.815 1.498  H12A PD4 49 
PD4 H14  H14  H 0 1 N N N 15.095 -4.287  13.461 -4.761 0.684  -0.799 H14  PD4 50 
PD4 H15  H15  H 0 1 N N N 13.572 -3.131  11.890 -7.221 0.417  -0.616 H15  PD4 51 
PD4 H17  H17  H 0 1 N N N 17.228 -5.972  10.178 -4.342 -3.249 0.869  H17  PD4 52 
PD4 H18  H18  H 0 1 N N N 19.172 -9.867  10.772 -0.922 2.877  -2.433 H18  PD4 53 
PD4 H18A H18A H 0 0 N N N 18.523 -8.184  10.579 -2.341 1.909  -1.967 H18A PD4 54 
PD4 H19  H19  H 0 1 N N N 21.509 -8.780  10.476 -2.389 4.034  -0.752 H19  PD4 55 
PD4 H19A H19A H 0 0 N N N 20.475 -8.908  9.030  -2.056 2.714  0.395  H19A PD4 56 
PD4 H20  H20  H 0 1 N N N 22.532 -6.620  9.421  -1.284 5.618  0.749  H20  PD4 57 
PD4 H20A H20A H 0 0 N N N 21.461 -7.016  8.037  -0.951 4.299  1.896  H20A PD4 58 
PD4 H21  H21  H 0 1 N N N 21.345 -4.493  9.769  1.485  4.666  1.612  H21  PD4 59 
PD4 H21A H21A H 0 0 N N N 21.960 -4.606  8.070  1.152  5.986  0.465  H21A PD4 60 
PD4 H22  H22  H 0 1 N N N 19.695 -3.627  8.148  -0.070 7.218  2.236  H22  PD4 61 
PD4 H22A H22A H 0 0 N N N 19.694 -5.208  7.296  0.263  5.898  3.384  H22A PD4 62 
PD4 H22B H22B H 0 0 N N N 19.083 -5.096  8.982  1.603  6.874  2.736  H22B PD4 63 
PD4 H23  H23  H 0 1 N N N 13.123 -2.741  7.464  -9.980 -2.935 0.901  H23  PD4 64 
PD4 H23A H23A H 0 0 N N N 14.901 -2.823  7.709  -8.549 -3.769 0.250  H23A PD4 65 
PD4 H23B H23B H 0 0 N N N 13.944 -4.336  7.555  -8.503 -3.066 1.885  H23B PD4 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PD4 C   C1   DOUB Y N 1  
PD4 C   N    SING Y N 2  
PD4 C   C13  SING N N 3  
PD4 C1  C2   SING Y N 4  
PD4 C2  C3   DOUB Y N 5  
PD4 C3  C4   SING Y N 6  
PD4 C3  N1   SING N N 7  
PD4 C4  N    DOUB Y N 8  
PD4 C4  N2   SING N N 9  
PD4 N1  C5   DOUB N N 10 
PD4 C5  C6   SING N N 11 
PD4 C5  N3   SING N N 12 
PD4 C6  N2   SING N N 13 
PD4 C6  O    DOUB N N 14 
PD4 N2  C18  SING N N 15 
PD4 N3  C7   SING N N 16 
PD4 C7  C8   SING N N 17 
PD4 C8  N4   SING N N 18 
PD4 N4  C9   SING N N 19 
PD4 N4  C12  SING N N 20 
PD4 C9  C10  SING N N 21 
PD4 C10 O1   SING N N 22 
PD4 O1  C11  SING N N 23 
PD4 C11 C12  SING N N 24 
PD4 C13 C14  DOUB Y N 25 
PD4 C13 C17  SING Y N 26 
PD4 C14 C15  SING Y N 27 
PD4 C15 C16  DOUB Y N 28 
PD4 C16 N5   SING Y N 29 
PD4 C16 O2   SING N N 30 
PD4 N5  C17  DOUB Y N 31 
PD4 C18 C19  SING N N 32 
PD4 O2  C23  SING N N 33 
PD4 C19 O3   SING N N 34 
PD4 O3  C20  SING N N 35 
PD4 C20 C21  SING N N 36 
PD4 C21 C22  SING N N 37 
PD4 C1  H1   SING N N 38 
PD4 C2  H2   SING N N 39 
PD4 N3  HN3  SING N N 40 
PD4 C7  H7   SING N N 41 
PD4 C7  H7A  SING N N 42 
PD4 C8  H8   SING N N 43 
PD4 C8  H8A  SING N N 44 
PD4 C9  H9   SING N N 45 
PD4 C9  H9A  SING N N 46 
PD4 C10 H10  SING N N 47 
PD4 C10 H10A SING N N 48 
PD4 C11 H11  SING N N 49 
PD4 C11 H11A SING N N 50 
PD4 C12 H12  SING N N 51 
PD4 C12 H12A SING N N 52 
PD4 C14 H14  SING N N 53 
PD4 C15 H15  SING N N 54 
PD4 C17 H17  SING N N 55 
PD4 C18 H18  SING N N 56 
PD4 C18 H18A SING N N 57 
PD4 C19 H19  SING N N 58 
PD4 C19 H19A SING N N 59 
PD4 C20 H20  SING N N 60 
PD4 C20 H20A SING N N 61 
PD4 C21 H21  SING N N 62 
PD4 C21 H21A SING N N 63 
PD4 C22 H22  SING N N 64 
PD4 C22 H22A SING N N 65 
PD4 C22 H22B SING N N 66 
PD4 C23 H23  SING N N 67 
PD4 C23 H23A SING N N 68 
PD4 C23 H23B SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PD4 SMILES           ACDLabs              12.01 "O=C3N(c4nc(c1ccc(OC)nc1)ccc4N=C3NCCN2CCOCC2)CCOCCC"                                                                                                              
PD4 InChI            InChI                1.03  "InChI=1S/C24H32N6O4/c1-3-13-33-16-12-30-23-20(6-5-19(28-23)18-4-7-21(32-2)26-17-18)27-22(24(30)31)25-8-9-29-10-14-34-15-11-29/h4-7,17H,3,8-16H2,1-2H3,(H,25,27)" 
PD4 InChIKey         InChI                1.03  KSAKYDGQTISGJC-UHFFFAOYSA-N                                                                                                                                       
PD4 SMILES_CANONICAL CACTVS               3.370 "CCCOCCN1C(=O)C(=Nc2ccc(nc12)c3ccc(OC)nc3)NCCN4CCOCC4"                                                                                                            
PD4 SMILES           CACTVS               3.370 "CCCOCCN1C(=O)C(=Nc2ccc(nc12)c3ccc(OC)nc3)NCCN4CCOCC4"                                                                                                            
PD4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCCOCCN1c2c(ccc(n2)c3ccc(nc3)OC)N=C(C1=O)NCCN4CCOCC4"                                                                                                            
PD4 SMILES           "OpenEye OEToolkits" 1.7.2 "CCCOCCN1c2c(ccc(n2)c3ccc(nc3)OC)N=C(C1=O)NCCN4CCOCC4"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PD4 "SYSTEMATIC NAME" ACDLabs              12.01 "6-(6-methoxypyridin-3-yl)-2-{[2-(morpholin-4-yl)ethyl]amino}-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one" 
PD4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "6-(6-methoxypyridin-3-yl)-2-(2-morpholin-4-ylethylamino)-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3-one"         
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PD4 "Create component"              2009-05-13 RCSB 
PD4 "Modify aromatic_flag"          2011-06-04 RCSB 
PD4 "Modify descriptor"             2011-06-04 RCSB 
PD4 "Modify model coordinates code" 2011-08-25 RCSB 
# 
