data_RF4
# 
_chem_comp.id                                    RF4 
_chem_comp.name                                  "(2-{[2-(2,6-dimethylphenoxy)ethyl]sulfanyl}-1H-benzimidazol-1-yl)acetic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H20 N2 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-03-06 
_chem_comp.pdbx_modified_date                    2015-10-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.439 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RF4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4XX9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RF4 C01 C1  C 0 1 Y N N -13.187 18.998 -13.571 5.144  -0.251 -1.229 C01 RF4 1  
RF4 C02 C2  C 0 1 Y N N -14.287 18.573 -14.227 6.471  -0.625 -1.147 C02 RF4 2  
RF4 C03 C3  C 0 1 Y N N -15.252 17.770 -13.568 7.195  -0.362 0.001  C03 RF4 3  
RF4 C04 C4  C 0 1 Y N N -15.081 17.434 -12.224 6.593  0.276  1.070  C04 RF4 4  
RF4 C05 C5  C 0 1 Y N N -13.983 17.864 -11.555 5.266  0.652  0.993  C05 RF4 5  
RF4 C06 C6  C 0 1 Y N N -13.004 18.656 -12.219 4.537  0.389  -0.158 C06 RF4 6  
RF4 O07 O1  O 0 1 N N N -11.816 19.133 -11.516 3.232  0.758  -0.237 O07 RF4 7  
RF4 C08 C7  C 0 1 N N N -10.719 18.202 -11.391 2.261  -0.193 0.203  C08 RF4 8  
RF4 C09 C8  C 0 1 N N N -12.142 19.857 -14.291 4.357  -0.533 -2.483 C09 RF4 9  
RF4 C10 C9  C 0 1 N N N -13.798 17.465 -10.060 4.610  1.348  2.158  C10 RF4 10 
RF4 C11 C10 C 0 1 N N N -9.595  18.932 -10.553 0.858  0.397  0.040  C11 RF4 11 
RF4 S12 S1  S 0 1 N N N -8.670  17.832 -9.465  -0.372 -0.809 0.597  S12 RF4 12 
RF4 C13 C11 C 0 1 Y N N -9.488  16.228 -9.249  -1.850 0.106  0.306  C13 RF4 13 
RF4 N14 N1  N 0 1 Y N N -8.996  15.094 -9.761  -3.114 -0.343 0.564  N14 RF4 14 
RF4 C15 C12 C 0 1 Y N N -9.865  14.085 -9.416  -3.990 0.666  0.200  C15 RF4 15 
RF4 C16 C13 C 0 1 Y N N -10.924 14.702 -8.683  -3.195 1.720  -0.280 C16 RF4 16 
RF4 N17 N2  N 0 1 Y N N -10.645 16.038 -8.598  -1.900 1.320  -0.184 N17 RF4 17 
RF4 C18 C14 C 0 1 Y N N -9.864  12.720 -9.666  -5.370 0.797  0.226  C18 RF4 18 
RF4 C19 C15 C 0 1 Y N N -10.928 11.951 -9.152  -5.958 1.963  -0.220 C19 RF4 19 
RF4 C20 C16 C 0 1 Y N N -11.998 12.573 -8.426  -5.178 3.006  -0.695 C20 RF4 20 
RF4 C21 C17 C 0 1 Y N N -12.008 13.927 -8.185  -3.806 2.894  -0.727 C21 RF4 21 
RF4 C22 C18 C 0 1 N N N -7.764  14.974 -10.485 -3.476 -1.649 1.121  C22 RF4 22 
RF4 C23 C19 C 0 1 N N N -6.636  14.571 -9.507  -3.675 -2.636 -0.000 C23 RF4 23 
RF4 O24 O2  O 0 1 N N N -5.428  14.450 -9.930  -3.530 -2.284 -1.147 O24 RF4 24 
RF4 O25 O3  O 0 1 N N N -6.897  14.338 -8.260  -4.014 -3.905 0.275  O25 RF4 25 
RF4 H1  H1  H 0 1 N N N -14.433 18.846 -15.261 6.944  -1.124 -1.980 H1  RF4 26 
RF4 H2  H2  H 0 1 N N N -16.120 17.418 -14.106 8.232  -0.656 0.064  H2  RF4 27 
RF4 H3  H3  H 0 1 N N N -15.822 16.833 -11.718 7.160  0.480  1.966  H3  RF4 28 
RF4 H4  H4  H 0 1 N N N -11.051 17.293 -10.868 2.345  -1.101 -0.395 H4  RF4 29 
RF4 H5  H5  H 0 1 N N N -10.335 17.933 -12.386 2.435  -0.432 1.252  H5  RF4 30 
RF4 H6  H6  H 0 1 N N N -12.398 20.921 -14.175 4.452  0.309  -3.169 H6  RF4 31 
RF4 H7  H7  H 0 1 N N N -11.150 19.669 -13.855 4.743  -1.434 -2.960 H7  RF4 32 
RF4 H8  H8  H 0 1 N N N -12.128 19.598 -15.360 3.307  -0.678 -2.229 H8  RF4 33 
RF4 H9  H9  H 0 1 N N N -13.249 16.514 -9.999  4.732  2.426  2.053  H9  RF4 34 
RF4 H10 H10 H 0 1 N N N -13.230 18.250 -9.539  3.548  1.102  2.176  H10 RF4 35 
RF4 H11 H11 H 0 1 N N N -14.784 17.350 -9.587  5.075  1.018  3.087  H11 RF4 36 
RF4 H12 H12 H 0 1 N N N -8.889  19.401 -11.254 0.774  1.304  0.638  H12 RF4 37 
RF4 H13 H13 H 0 1 N N N -10.071 19.709 -9.937  0.684  0.635  -1.009 H13 RF4 38 
RF4 H14 H14 H 0 1 N N N -9.071  12.260 -10.238 -5.983 -0.013 0.593  H14 RF4 39 
RF4 H15 H15 H 0 1 N N N -10.938 10.882 -9.306  -7.033 2.064  -0.199 H15 RF4 40 
RF4 H16 H16 H 0 1 N N N -12.813 11.965 -8.061  -5.650 3.914  -1.041 H16 RF4 41 
RF4 H17 H17 H 0 1 N N N -12.815 14.388 -7.634  -3.204 3.711  -1.097 H17 RF4 42 
RF4 H18 H18 H 0 1 N N N -7.868  14.204 -11.263 -2.678 -1.999 1.775  H18 RF4 43 
RF4 H19 H19 H 0 1 N N N -7.517  15.938 -10.954 -4.400 -1.557 1.692  H19 RF4 44 
RF4 H20 H20 H 0 1 N N N -6.097  14.094 -7.809  -4.131 -4.501 -0.477 H20 RF4 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RF4 C09 C01 SING N N 1  
RF4 C02 C01 DOUB Y N 2  
RF4 C02 C03 SING Y N 3  
RF4 C01 C06 SING Y N 4  
RF4 C03 C04 DOUB Y N 5  
RF4 C04 C05 SING Y N 6  
RF4 C06 C05 DOUB Y N 7  
RF4 C06 O07 SING N N 8  
RF4 C05 C10 SING N N 9  
RF4 O07 C08 SING N N 10 
RF4 C08 C11 SING N N 11 
RF4 C11 S12 SING N N 12 
RF4 C22 N14 SING N N 13 
RF4 C22 C23 SING N N 14 
RF4 O24 C23 DOUB N N 15 
RF4 N14 C15 SING Y N 16 
RF4 N14 C13 SING Y N 17 
RF4 C18 C15 DOUB Y N 18 
RF4 C18 C19 SING Y N 19 
RF4 C23 O25 SING N N 20 
RF4 S12 C13 SING N N 21 
RF4 C15 C16 SING Y N 22 
RF4 C13 N17 DOUB Y N 23 
RF4 C19 C20 DOUB Y N 24 
RF4 C16 N17 SING Y N 25 
RF4 C16 C21 DOUB Y N 26 
RF4 C20 C21 SING Y N 27 
RF4 C02 H1  SING N N 28 
RF4 C03 H2  SING N N 29 
RF4 C04 H3  SING N N 30 
RF4 C08 H4  SING N N 31 
RF4 C08 H5  SING N N 32 
RF4 C09 H6  SING N N 33 
RF4 C09 H7  SING N N 34 
RF4 C09 H8  SING N N 35 
RF4 C10 H9  SING N N 36 
RF4 C10 H10 SING N N 37 
RF4 C10 H11 SING N N 38 
RF4 C11 H12 SING N N 39 
RF4 C11 H13 SING N N 40 
RF4 C18 H14 SING N N 41 
RF4 C19 H15 SING N N 42 
RF4 C20 H16 SING N N 43 
RF4 C21 H17 SING N N 44 
RF4 C22 H18 SING N N 45 
RF4 C22 H19 SING N N 46 
RF4 O25 H20 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RF4 SMILES           ACDLabs              12.01 "c1(c(c(ccc1)C)OCCSc2nc3c(n2CC(O)=O)cccc3)C"                                                                                     
RF4 InChI            InChI                1.03  "InChI=1S/C19H20N2O3S/c1-13-6-5-7-14(2)18(13)24-10-11-25-19-20-15-8-3-4-9-16(15)21(19)12-17(22)23/h3-9H,10-12H2,1-2H3,(H,22,23)" 
RF4 InChIKey         InChI                1.03  ZAHFRMHMWCBLOL-UHFFFAOYSA-N                                                                                                      
RF4 SMILES_CANONICAL CACTVS               3.385 "Cc1cccc(C)c1OCCSc2nc3ccccc3n2CC(O)=O"                                                                                           
RF4 SMILES           CACTVS               3.385 "Cc1cccc(C)c1OCCSc2nc3ccccc3n2CC(O)=O"                                                                                           
RF4 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1cccc(c1OCCSc2nc3ccccc3n2CC(=O)O)C"                                                                                           
RF4 SMILES           "OpenEye OEToolkits" 1.9.2 "Cc1cccc(c1OCCSc2nc3ccccc3n2CC(=O)O)C"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RF4 "SYSTEMATIC NAME" ACDLabs              12.01 "(2-{[2-(2,6-dimethylphenoxy)ethyl]sulfanyl}-1H-benzimidazol-1-yl)acetic acid" 
RF4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[2-[2-(2,6-dimethylphenoxy)ethylsulfanyl]benzimidazol-1-yl]ethanoic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RF4 "Create component" 2015-03-06 RCSB 
RF4 "Initial release"  2015-10-21 RCSB 
# 
