data_IO5
#

_chem_comp.id                                   IO5
_chem_comp.name                                 "(2S)-2-({3,5-dicyano-4-ethyl-6-[4-(2-hydroxyethyl)-1,4-diazepan-1-yl]pyridin-2-yl}sulfanyl)-2-phenylacetamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H28 N6 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-10-04
_chem_comp.pdbx_modified_date                   2022-03-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       464.583
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    IO5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7SFD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IO5  C01  C1   C  0  1  N  N  N  -44.597   -7.168  31.457  -1.385   5.054   1.177  C01  IO5   1  
IO5  C02  C2   C  0  1  N  N  N  -45.399   -7.790  30.305  -1.054   4.613  -0.250  C02  IO5   2  
IO5  C03  C3   C  0  1  Y  N  N  -44.850   -9.175  29.823  -0.623   3.169  -0.243  C03  IO5   3  
IO5  C04  C4   C  0  1  Y  N  N  -45.390  -10.340  30.348  -1.556   2.141  -0.398  C04  IO5   4  
IO5  C05  C5   C  0  1  N  N  N  -46.481  -10.129  31.371  -2.946   2.444  -0.567  C05  IO5   5  
IO5  C07  C6   C  0  1  Y  N  N  -44.886  -11.585  29.894  -1.113   0.804  -0.386  C07  IO5   6  
IO5  C09  C7   C  0  1  N  N  N  -46.666  -13.123  30.962  -1.897  -0.840  -1.833  C09  IO5   7  
IO5  C10  C8   C  0  1  N  N  N  -47.402  -14.382  30.480  -3.306  -1.150  -2.380  C10  IO5   8  
IO5  C11  C9   C  0  1  N  N  N  -47.687  -14.372  28.972  -3.872  -2.354  -1.775  C11  IO5   9  
IO5  C13  C10  C  0  1  N  N  N  -45.543  -14.190  28.177  -2.753  -2.466   0.339  C13  IO5  10  
IO5  C14  C11  C  0  1  N  N  N  -44.784  -14.033  29.508  -1.961  -1.165   0.601  C14  IO5  11  
IO5  C15  C12  C  0  1  N  N  N  -47.161  -15.064  27.001  -5.052  -3.139   0.201  C15  IO5  12  
IO5  C16  C13  C  0  1  N  N  N  -46.152  -15.772  26.069  -5.329  -2.827   1.674  C16  IO5  13  
IO5  C19  C14  C  0  1  Y  N  N  -43.390  -10.485  28.474   1.085   1.462  -0.085  C19  IO5  14  
IO5  C21  C15  C  0  1  N  N  S  -41.996  -12.189  26.282   2.653  -0.780  -0.106  C21  IO5  15  
IO5  C22  C16  C  0  1  Y  N  N  -40.606  -12.358  25.579   4.036  -1.369  -0.219  C22  IO5  16  
IO5  C23  C17  C  0  1  Y  N  N  -40.468  -12.121  24.211   4.918  -1.271   0.841  C23  IO5  17  
IO5  C24  C18  C  0  1  Y  N  N  -39.224  -12.285  23.594   6.186  -1.811   0.737  C24  IO5  18  
IO5  C25  C19  C  0  1  Y  N  N  -38.117  -12.699  24.359   6.572  -2.450  -0.427  C25  IO5  19  
IO5  C26  C20  C  0  1  Y  N  N  -38.257  -12.945  25.731   5.690  -2.549  -1.486  C26  IO5  20  
IO5  C27  C21  C  0  1  Y  N  N  -39.500  -12.780  26.345   4.420  -2.013  -1.381  C27  IO5  21  
IO5  C28  C22  C  0  1  N  N  N  -42.227  -13.441  27.149   1.946  -1.383   1.081  C28  IO5  22  
IO5  C31  C23  C  0  1  Y  N  N  -43.845   -9.230  28.880   0.722   2.824  -0.086  C31  IO5  23  
IO5  C32  C24  C  0  1  N  N  N  -43.266   -7.957  28.314   1.718   3.840   0.071  C32  IO5  24  
IO5  N06  N1   N  0  1  N  N  N  -47.286   -9.954  32.126  -4.048   2.683  -0.702  N06  IO5  25  
IO5  N08  N2   N  0  1  N  N  N  -45.347  -12.972  30.341  -2.028  -0.219  -0.538  N08  IO5  26  
IO5  N12  N3   N  0  1  N  N  N  -46.698  -14.934  28.218  -4.020  -2.225  -0.307  N12  IO5  27  
IO5  N18  N4   N  0  1  Y  N  N  -43.916  -11.586  28.989   0.169   0.516  -0.230  N18  IO5  28  
IO5  N29  N5   N  0  1  N  N  N  -42.772  -14.641  26.541   2.061  -0.810   2.296  N29  IO5  29  
IO5  N33  N6   N  0  1  N  N  N  -42.846   -7.006  27.900   2.508   4.647   0.196  N33  IO5  30  
IO5  O17  O1   O  0  1  N  N  N  -46.121  -15.053  24.839  -5.893  -1.519   1.786  O17  IO5  31  
IO5  O30  O2   O  0  1  N  N  N  -41.936  -13.445  28.289   1.273  -2.382   0.942  O30  IO5  32  
IO5  S20  S1   S  0  1  N  N  N  -42.033  -10.587  27.220   2.777   1.012   0.111  S20  IO5  33  
IO5  H1   H1   H  0  1  N  N  N  -45.044   -6.202  31.736  -2.192   4.435   1.570  H1   IO5  34  
IO5  H2   H2   H  0  1  N  N  N  -44.616   -7.845  32.324  -0.502   4.942   1.806  H2   IO5  35  
IO5  H3   H3   H  0  1  N  N  N  -43.556   -7.012  31.137  -1.697   6.098   1.171  H3   IO5  36  
IO5  H4   H4   H  0  1  N  N  N  -45.378   -7.094  29.453  -1.937   4.725  -0.879  H4   IO5  37  
IO5  H5   H5   H  0  1  N  N  N  -46.437   -7.927  30.641  -0.247   5.231  -0.643  H5   IO5  38  
IO5  H6   H6   H  0  1  N  N  N  -46.537  -13.185  32.053  -1.329  -1.765  -1.740  H6   IO5  39  
IO5  H7   H7   H  0  1  N  N  N  -47.276  -12.241  30.714  -1.382  -0.162  -2.514  H7   IO5  40  
IO5  H8   H8   H  0  1  N  N  N  -48.359  -14.455  31.017  -3.962  -0.305  -2.170  H8   IO5  41  
IO5  H9   H9   H  0  1  N  N  N  -46.783  -15.261  30.714  -3.245  -1.292  -3.459  H9   IO5  42  
IO5  H10  H10  H  0  1  N  N  N  -47.816  -13.328  28.651  -4.852  -2.543  -2.214  H10  IO5  43  
IO5  H11  H11  H  0  1  N  N  N  -48.618  -14.929  28.792  -3.219  -3.199  -1.991  H11  IO5  44  
IO5  H12  H12  H  0  1  N  N  N  -44.862  -14.668  27.457  -2.154  -3.121  -0.294  H12  IO5  45  
IO5  H13  H13  H  0  1  N  N  N  -45.806  -13.183  27.820  -2.932  -2.966   1.291  H13  IO5  46  
IO5  H14  H14  H  0  1  N  N  N  -44.836  -14.983  30.060  -2.369  -0.678   1.487  H14  IO5  47  
IO5  H15  H15  H  0  1  N  N  N  -43.733  -13.793  29.291  -0.919  -1.419   0.790  H15  IO5  48  
IO5  H16  H16  H  0  1  N  N  N  -47.378  -14.065  26.595  -4.705  -4.168   0.107  H16  IO5  49  
IO5  H17  H17  H  0  1  N  N  N  -48.088  -15.655  27.035  -5.968  -3.010  -0.376  H17  IO5  50  
IO5  H18  H18  H  0  1  N  N  N  -46.472  -16.809  25.889  -6.029  -3.560   2.075  H18  IO5  51  
IO5  H19  H19  H  0  1  N  N  N  -45.153  -15.771  26.529  -4.396  -2.870   2.236  H19  IO5  52  
IO5  H20  H20  H  0  1  N  N  N  -42.784  -12.116  25.518   2.090  -0.998  -1.013  H20  IO5  53  
IO5  H21  H21  H  0  1  N  N  N  -41.323  -11.811  23.628   4.616  -0.772   1.750  H21  IO5  54  
IO5  H22  H22  H  0  1  N  N  N  -39.113  -12.095  22.537   6.875  -1.734   1.565  H22  IO5  55  
IO5  H23  H23  H  0  1  N  N  N  -37.155  -12.828  23.886   7.563  -2.871  -0.508  H23  IO5  56  
IO5  H24  H24  H  0  1  N  N  N  -37.404  -13.262  26.313   5.992  -3.047  -2.396  H24  IO5  57  
IO5  H25  H25  H  0  1  N  N  N  -39.614  -12.975  27.401   3.729  -2.093  -2.207  H25  IO5  58  
IO5  H27  H27  H  0  1  N  N  N  -42.899  -15.467  27.091   2.536   0.030   2.393  H27  IO5  59  
IO5  H28  H28  H  0  1  N  N  N  -43.021  -14.642  25.572   1.669  -1.239   3.072  H28  IO5  60  
IO5  H29  H29  H  0  1  N  N  N  -45.507  -15.468  24.245  -6.095  -1.254   2.694  H29  IO5  61  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IO5  C24  C23  DOUB  Y  N   1  
IO5  C24  C25  SING  Y  N   2  
IO5  C23  C22  SING  Y  N   3  
IO5  C25  C26  DOUB  Y  N   4  
IO5  O17  C16  SING  N  N   5  
IO5  C22  C21  SING  N  N   6  
IO5  C22  C27  DOUB  Y  N   7  
IO5  C26  C27  SING  Y  N   8  
IO5  C16  C15  SING  N  N   9  
IO5  C21  C28  SING  N  N  10  
IO5  C21  S20  SING  N  N  11  
IO5  N29  C28  SING  N  N  12  
IO5  C15  N12  SING  N  N  13  
IO5  C28  O30  DOUB  N  N  14  
IO5  S20  C19  SING  N  N  15  
IO5  N33  C32  TRIP  N  N  16  
IO5  C13  N12  SING  N  N  17  
IO5  C13  C14  SING  N  N  18  
IO5  N12  C11  SING  N  N  19  
IO5  C32  C31  SING  N  N  20  
IO5  C19  C31  DOUB  Y  N  21  
IO5  C19  N18  SING  Y  N  22  
IO5  C31  C03  SING  Y  N  23  
IO5  C11  C10  SING  N  N  24  
IO5  N18  C07  DOUB  Y  N  25  
IO5  C14  N08  SING  N  N  26  
IO5  C03  C02  SING  N  N  27  
IO5  C03  C04  DOUB  Y  N  28  
IO5  C07  N08  SING  N  N  29  
IO5  C07  C04  SING  Y  N  30  
IO5  C02  C01  SING  N  N  31  
IO5  N08  C09  SING  N  N  32  
IO5  C04  C05  SING  N  N  33  
IO5  C10  C09  SING  N  N  34  
IO5  C05  N06  TRIP  N  N  35  
IO5  C01  H1   SING  N  N  36  
IO5  C01  H2   SING  N  N  37  
IO5  C01  H3   SING  N  N  38  
IO5  C02  H4   SING  N  N  39  
IO5  C02  H5   SING  N  N  40  
IO5  C09  H6   SING  N  N  41  
IO5  C09  H7   SING  N  N  42  
IO5  C10  H8   SING  N  N  43  
IO5  C10  H9   SING  N  N  44  
IO5  C11  H10  SING  N  N  45  
IO5  C11  H11  SING  N  N  46  
IO5  C13  H12  SING  N  N  47  
IO5  C13  H13  SING  N  N  48  
IO5  C14  H14  SING  N  N  49  
IO5  C14  H15  SING  N  N  50  
IO5  C15  H16  SING  N  N  51  
IO5  C15  H17  SING  N  N  52  
IO5  C16  H18  SING  N  N  53  
IO5  C16  H19  SING  N  N  54  
IO5  C21  H20  SING  N  N  55  
IO5  C23  H21  SING  N  N  56  
IO5  C24  H22  SING  N  N  57  
IO5  C25  H23  SING  N  N  58  
IO5  C26  H24  SING  N  N  59  
IO5  C27  H25  SING  N  N  60  
IO5  N29  H27  SING  N  N  61  
IO5  N29  H28  SING  N  N  62  
IO5  O17  H29  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IO5  SMILES            ACDLabs               12.01  "NC(=O)C(Sc1nc(N2CCCN(CCO)CC2)c(C#N)c(CC)c1C#N)c1ccccc1"  
IO5  InChI             InChI                 1.03   "InChI=1S/C24H28N6O2S/c1-2-18-19(15-25)23(30-10-6-9-29(11-12-30)13-14-31)28-24(20(18)16-26)33-21(22(27)32)17-7-4-3-5-8-17/h3-5,7-8,21,31H,2,6,9-14H2,1H3,(H2,27,32)/t21-/m0/s1"  
IO5  InChIKey          InChI                 1.03   IHXXDZHXEBKTKE-NRFANRHFSA-N  
IO5  SMILES_CANONICAL  CACTVS                3.385  "CCc1c(C#N)c(S[C@H](C(N)=O)c2ccccc2)nc(N3CCCN(CCO)CC3)c1C#N"  
IO5  SMILES            CACTVS                3.385  "CCc1c(C#N)c(S[CH](C(N)=O)c2ccccc2)nc(N3CCCN(CCO)CC3)c1C#N"  
IO5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(c1C#N)S[C@@H](c2ccccc2)C(=O)N)N3CCCN(CC3)CCO)C#N"  
IO5  SMILES            "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(c1C#N)SC(c2ccccc2)C(=O)N)N3CCCN(CC3)CCO)C#N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
IO5  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S)-2-({3,5-dicyano-4-ethyl-6-[4-(2-hydroxyethyl)-1,4-diazepan-1-yl]pyridin-2-yl}sulfanyl)-2-phenylacetamide"  
IO5  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-[3,5-dicyano-4-ethyl-6-[4-(2-hydroxyethyl)-1,4-diazepan-1-yl]pyridin-2-yl]sulfanyl-2-phenyl-ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IO5  "Create component"  2021-10-04  RCSB  
IO5  "Initial release"   2022-03-30  RCSB  
##
