data_JC5
#

_chem_comp.id                                   JC5
_chem_comp.name                                 "[3-(aminomethyl)-5-[3-(1,3-dihydroisoindol-2-yl)propoxy]-4-methoxy-phenyl]methanamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H27 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-14
_chem_comp.pdbx_modified_date                   2019-07-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       341.447
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JC5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6QPL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JC5  N1   N1   N  0  1  N  N  N   -5.519  -36.326  -8.902   3.274   4.211   0.356  N1   JC5   1  
JC5  C4   C1   C  0  1  Y  N  N   -7.357  -38.172  -6.821   4.716   1.311   0.073  C4   JC5   2  
JC5  C5   C2   C  0  1  Y  N  N   -7.150  -36.831  -7.125   3.549   1.908  -0.367  C5   JC5   3  
JC5  C6   C3   C  0  1  N  N  N   -5.755  -36.317  -7.448   3.559   3.351  -0.800  C6   JC5   4  
JC5  C7   C4   C  0  1  Y  N  N   -8.215  -35.942  -7.009   2.373   1.183  -0.410  C7   JC5   5  
JC5  C8   C5   C  0  1  Y  N  N   -9.442  -36.382  -6.548   2.362  -0.144  -0.013  C8   JC5   6  
JC5  C10  C6   C  0  1  N  N  N  -11.575  -33.600  -5.573  -1.155  -1.135  -0.496  C10  JC5   7  
JC5  C13  C7   C  0  1  Y  N  N  -14.433  -36.950  -4.728  -5.511  -0.020  -0.594  C13  JC5   8  
JC5  C15  C8   C  0  1  Y  N  N  -15.993  -38.770  -4.530  -7.073   1.436   0.488  C15  JC5   9  
JC5  C17  C9   C  0  1  Y  N  N  -14.485  -38.286  -2.728  -5.676  -0.005   1.795  C17  JC5  10  
JC5  N    N2   N  0  1  N  N  N   -7.891  -40.449  -4.866   6.561  -1.464  -0.144  N    JC5  11  
JC5  C    C10  C  0  1  N  N  N  -11.792  -38.577  -6.606   3.793  -3.028  -0.185  C    JC5  12  
JC5  O    O1   O  0  1  N  N  N  -10.814  -38.141  -5.663   3.530  -2.047   0.821  O    JC5  13  
JC5  C1   C11  C  0  1  Y  N  N   -9.619  -37.723  -6.207   3.536  -0.745   0.430  C1   JC5  14  
JC5  C11  C12  C  0  1  N  N  N  -12.044  -34.254  -4.282  -2.404  -0.405  -0.994  C11  JC5  15  
JC5  C12  C13  C  0  1  N  N  N  -13.713  -35.775  -5.317  -4.717  -0.735  -1.665  C12  JC5  16  
JC5  C14  C14  C  0  1  Y  N  N  -15.458  -37.724  -5.263  -6.495   0.946  -0.669  C14  JC5  17  
JC5  C16  C15  C  0  1  Y  N  N  -15.506  -39.054  -3.268  -6.665   0.958   1.720  C16  JC5  18  
JC5  C18  C16  C  0  1  Y  N  N  -13.948  -37.234  -3.457  -5.102  -0.499   0.640  C18  JC5  19  
JC5  C19  C17  C  0  1  N  N  N  -12.838  -36.291  -3.085  -4.030  -1.540   0.413  C19  JC5  20  
JC5  C2   C18  C  0  1  Y  N  N   -8.581  -38.642  -6.356   4.712  -0.013   0.471  C2   JC5  21  
JC5  C3   C19  C  0  1  N  N  N   -8.749  -40.100  -5.993   5.987  -0.661   0.944  C3   JC5  22  
JC5  C9   C20  C  0  1  N  N  N  -10.296  -34.186  -6.110   0.038  -0.177  -0.519  C9   JC5  23  
JC5  N2   N3   N  0  1  N  N  N  -12.492  -35.647  -4.417  -3.550  -1.324  -0.971  N2   JC5  24  
JC5  O1   O2   O  0  1  N  N  N  -10.531  -35.581  -6.346   1.205  -0.859  -0.054  O1   JC5  25  
JC5  H27  H1   H  0  1  N  N  N   -4.598  -35.985  -9.093   3.275   5.185   0.091  H27  JC5  26  
JC5  H11  H2   H  0  1  N  N  N   -5.607  -37.260  -9.248   2.399   3.956   0.789  H11  JC5  27  
JC5  H7   H4   H  0  1  N  N  N   -6.543  -38.870  -6.950   5.634   1.879   0.101  H7   JC5  28  
JC5  H9   H5   H  0  1  N  N  N   -5.011  -36.961  -6.958   2.799   3.506  -1.565  H9   JC5  29  
JC5  H8   H6   H  0  1  N  N  N   -5.654  -35.288  -7.072   4.540   3.601  -1.206  H8   JC5  30  
JC5  H12  H7   H  0  1  N  N  N   -8.082  -34.905  -7.280   1.462   1.651  -0.754  H12  JC5  31  
JC5  H15  H8   H  0  1  N  N  N  -11.415  -32.528  -5.383  -1.320  -1.484   0.523  H15  JC5  32  
JC5  H16  H9   H  0  1  N  N  N  -12.361  -33.724  -6.332  -0.950  -1.987  -1.144  H16  JC5  33  
JC5  H22  H10  H  0  1  N  N  N  -16.793  -39.365  -4.945  -7.845   2.188   0.430  H22  JC5  34  
JC5  H24  H11  H  0  1  N  N  N  -14.108  -38.507  -1.740  -5.358  -0.378   2.758  H24  JC5  35  
JC5  H5   H12  H  0  1  N  N  N   -8.014  -41.415  -4.639   6.710  -0.901  -0.969  H5   JC5  36  
JC5  H6   H13  H  0  1  N  N  N   -6.936  -40.283  -5.111   7.418  -1.910   0.148  H6   JC5  37  
JC5  H2   H15  H  0  1  N  N  N  -12.703  -38.888  -6.073   3.759  -4.023   0.260  H2   JC5  38  
JC5  H1   H16  H  0  1  N  N  N  -12.032  -37.752  -7.293   3.041  -2.954  -0.970  H1   JC5  39  
JC5  H    H17  H  0  1  N  N  N  -11.395  -39.427  -7.179   4.781  -2.855  -0.612  H    JC5  40  
JC5  H17  H18  H  0  1  N  N  N  -11.209  -34.232  -3.566  -2.610   0.447  -0.346  H17  JC5  41  
JC5  H18  H19  H  0  1  N  N  N  -12.883  -33.663  -3.886  -2.239  -0.055  -2.013  H18  JC5  42  
JC5  H20  H20  H  0  1  N  N  N  -13.419  -35.971  -6.359  -5.321  -1.520  -2.120  H20  JC5  43  
JC5  H19  H21  H  0  1  N  N  N  -14.334  -34.868  -5.275  -4.386  -0.026  -2.424  H19  JC5  44  
JC5  H21  H22  H  0  1  N  N  N  -15.837  -37.509  -6.251  -6.813   1.319  -1.631  H21  JC5  45  
JC5  H23  H23  H  0  1  N  N  N  -15.921  -39.875  -2.702  -7.119   1.338   2.623  H23  JC5  46  
JC5  H25  H24  H  0  1  N  N  N  -11.976  -36.835  -2.671  -3.214  -1.400   1.121  H25  JC5  47  
JC5  H26  H25  H  0  1  N  N  N  -13.181  -35.540  -2.358  -4.450  -2.541   0.515  H26  JC5  48  
JC5  H3   H26  H  0  1  N  N  N   -9.798  -40.286  -5.720   5.773  -1.306   1.797  H3   JC5  49  
JC5  H4   H27  H  0  1  N  N  N   -8.479  -40.722  -6.859   6.698   0.109   1.242  H4   JC5  50  
JC5  H13  H28  H  0  1  N  N  N   -9.487  -34.060  -5.376   0.203   0.172  -1.538  H13  JC5  51  
JC5  H14  H29  H  0  1  N  N  N  -10.019  -33.687  -7.050  -0.167   0.675   0.128  H14  JC5  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JC5  N1   C6   SING  N  N   1  
JC5  C6   C5   SING  N  N   2  
JC5  C5   C7   DOUB  Y  N   3  
JC5  C5   C4   SING  Y  N   4  
JC5  C7   C8   SING  Y  N   5  
JC5  C4   C2   DOUB  Y  N   6  
JC5  C    O    SING  N  N   7  
JC5  C8   O1   SING  N  N   8  
JC5  C8   C1   DOUB  Y  N   9  
JC5  C2   C1   SING  Y  N  10  
JC5  C2   C3   SING  N  N  11  
JC5  O1   C9   SING  N  N  12  
JC5  C1   O    SING  N  N  13  
JC5  C9   C10  SING  N  N  14  
JC5  C3   N    SING  N  N  15  
JC5  C10  C11  SING  N  N  16  
JC5  C12  C13  SING  N  N  17  
JC5  C12  N2   SING  N  N  18  
JC5  C14  C13  DOUB  Y  N  19  
JC5  C14  C15  SING  Y  N  20  
JC5  C13  C18  SING  Y  N  21  
JC5  C15  C16  DOUB  Y  N  22  
JC5  N2   C11  SING  N  N  23  
JC5  N2   C19  SING  N  N  24  
JC5  C18  C19  SING  N  N  25  
JC5  C18  C17  DOUB  Y  N  26  
JC5  C16  C17  SING  Y  N  27  
JC5  N1   H27  SING  N  N  28  
JC5  N1   H11  SING  N  N  29  
JC5  C4   H7   SING  N  N  30  
JC5  C6   H9   SING  N  N  31  
JC5  C6   H8   SING  N  N  32  
JC5  C7   H12  SING  N  N  33  
JC5  C10  H15  SING  N  N  34  
JC5  C10  H16  SING  N  N  35  
JC5  C15  H22  SING  N  N  36  
JC5  C17  H24  SING  N  N  37  
JC5  N    H5   SING  N  N  38  
JC5  N    H6   SING  N  N  39  
JC5  C    H2   SING  N  N  40  
JC5  C    H1   SING  N  N  41  
JC5  C    H    SING  N  N  42  
JC5  C11  H17  SING  N  N  43  
JC5  C11  H18  SING  N  N  44  
JC5  C12  H20  SING  N  N  45  
JC5  C12  H19  SING  N  N  46  
JC5  C14  H21  SING  N  N  47  
JC5  C16  H23  SING  N  N  48  
JC5  C19  H25  SING  N  N  49  
JC5  C19  H26  SING  N  N  50  
JC5  C3   H3   SING  N  N  51  
JC5  C3   H4   SING  N  N  52  
JC5  C9   H13  SING  N  N  53  
JC5  C9   H14  SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JC5  InChI             InChI                 1.03   "InChI=1S/C20H27N3O2/c1-24-20-18(12-22)9-15(11-21)10-19(20)25-8-4-7-23-13-16-5-2-3-6-17(16)14-23/h2-3,5-6,9-10H,4,7-8,11-14,21-22H2,1H3"  
JC5  InChIKey          InChI                 1.03   XQQZNYFJATXWON-UHFFFAOYSA-N  
JC5  SMILES_CANONICAL  CACTVS                3.385  "COc1c(CN)cc(CN)cc1OCCCN2Cc3ccccc3C2"  
JC5  SMILES            CACTVS                3.385  "COc1c(CN)cc(CN)cc1OCCCN2Cc3ccccc3C2"  
JC5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1c(cc(cc1OCCCN2Cc3ccccc3C2)CN)CN"  
JC5  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1c(cc(cc1OCCCN2Cc3ccccc3C2)CN)CN"  
#
_pdbx_chem_comp_identifier.comp_id          JC5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[3-(aminomethyl)-5-[3-(1,3-dihydroisoindol-2-yl)propoxy]-4-methoxy-phenyl]methanamine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JC5  "Create component"    2019-02-14  RCSB  
JC5  "Other modification"  2019-03-12  RCSB  
JC5  "Initial release"     2019-07-17  RCSB  
##
