data_NT5
#

_chem_comp.id                                   NT5
_chem_comp.name                                 "[(2~{R},5~{R})-5-[(5-fluoranylpyridin-2-yl)oxymethyl]-2-methyl-piperidin-1-yl]-(5-methyl-2-pyrimidin-2-yl-phenyl)methanone"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H25 F N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-12-12
_chem_comp.pdbx_modified_date                   2019-12-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       420.479
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NT5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6TP6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NT5  C1    C1   C  0  1  N  N  N  24.617  -4.571   94.589   3.375  -3.025   1.161  C1    NT5   1  
NT5  C10   C2   C  0  1  Y  N  N  27.153   4.599   96.357  -6.369   0.498  -0.683  C10   NT5   2  
NT5  C11   C3   C  0  1  Y  N  N  26.109   4.068   95.598  -5.943  -0.785  -0.393  C11   NT5   3  
NT5  C12   C4   C  0  1  N  N  N  26.711  -2.267   94.965  -0.012  -1.246   1.020  C12   NT5   4  
NT5  C13   C5   C  0  1  N  N  N  25.299  -2.277   97.095   2.332  -0.548   1.122  C13   NT5   5  
NT5  C14   C6   C  0  1  Y  N  N  26.407  -1.692   97.943   1.886   0.861   1.124  C14   NT5   6  
NT5  C15   C7   C  0  1  Y  N  N  26.283  -0.348   98.313   1.066   1.335   2.147  C15   NT5   7  
NT5  C16   C8   C  0  1  Y  N  N  27.254   0.275   99.089   0.652   2.652   2.144  C16   NT5   8  
NT5  C17   C9   C  0  1  Y  N  N  28.362  -0.443   99.511   1.046   3.508   1.130  C17   NT5   9  
NT5  C18   C10  C  0  1  Y  N  N  28.494  -1.779   99.150   1.858   3.055   0.109  C18   NT5  10  
NT5  C19   C11  C  0  1  Y  N  N  27.540  -2.452   98.369   2.291   1.733   0.098  C19   NT5  11  
NT5  C2    C12  C  0  1  N  N  R  24.351  -3.108   95.009   1.849  -2.945   1.230  C2    NT5  12  
NT5  C20   C13  C  0  1  Y  N  N  27.786  -3.918   98.030   3.168   1.244  -0.993  C20   NT5  13  
NT5  C21   C14  C  0  1  Y  N  N  26.946  -5.993   97.321   4.226  -0.518  -2.028  C21   NT5  14  
NT5  C22   C15  C  0  1  Y  N  N  28.207  -6.565   97.398   4.742   0.360  -2.969  C22   NT5  15  
NT5  C23   C16  C  0  1  Y  N  N  29.236  -5.725   97.811   4.429   1.707  -2.861  C23   NT5  16  
NT5  C24   C17  C  0  1  N  N  N  27.101   1.731   99.480  -0.235   3.160   3.251  C24   NT5  17  
NT5  C3    C18  C  0  1  N  N  N  23.993  -2.231   93.789   1.240  -3.735   0.068  C3    NT5  18  
NT5  C4    C19  C  0  1  N  N  N  25.200  -1.847   92.929  -0.278  -3.537   0.061  C4    NT5  19  
NT5  C5    C20  C  0  1  N  N  R  26.346  -1.322   93.800  -0.600  -2.054  -0.140  C5    NT5  20  
NT5  C6    C21  C  0  1  N  N  N  26.098   0.120   94.290  -2.118  -1.862  -0.179  C6    NT5  21  
NT5  C7    C22  C  0  1  Y  N  N  27.151   1.982   95.478  -3.729  -0.157  -0.555  C7    NT5  22  
NT5  C8    C23  C  0  1  Y  N  N  28.228   2.450   96.234  -4.083   1.154  -0.847  C8    NT5  23  
NT5  C9    C24  C  0  1  Y  N  N  28.228   3.774   96.678  -5.424   1.490  -0.919  C9    NT5  24  
NT5  F1    F1   F  0  1  N  N  N  27.120   5.883   96.769  -7.688   0.783  -0.743  F1    NT5  25  
NT5  N1    N1   N  0  1  Y  N  N  26.091   2.785   95.158  -4.656  -1.074  -0.337  N1    NT5  26  
NT5  N2    N2   N  0  1  N  N  N  25.482  -2.518   95.755   1.423  -1.543   1.124  N2    NT5  27  
NT5  N3    N3   N  0  1  Y  N  N  26.735  -4.692   97.633   3.452  -0.049  -1.065  N3    NT5  28  
NT5  N4    N4   N  0  1  Y  N  N  29.054  -4.412   98.128   3.645   2.110  -1.877  N4    NT5  29  
NT5  O1    O1   O  0  1  N  N  N  27.174   0.666   95.049  -2.417  -0.498  -0.483  O1    NT5  30  
NT5  O2    O2   O  0  1  N  N  N  24.236  -2.536   97.671   3.520  -0.809   1.118  O2    NT5  31  
NT5  H12   H1   H  0  1  N  N  N  24.869  -5.168   95.478   3.805  -2.512   2.021  H12   NT5  32  
NT5  H11   H2   H  0  1  N  N  N  23.716  -4.985   94.112   3.685  -4.070   1.168  H11   NT5  33  
NT5  H13   H3   H  0  1  N  N  N  25.455  -4.601   93.878   3.722  -2.550   0.243  H13   NT5  34  
NT5  H111  H4   H  0  0  N  N  N  25.276   4.709   95.349  -6.672  -1.560  -0.208  H111  NT5  35  
NT5  H122  H5   H  0  0  N  N  N  27.099  -3.216   94.568  -0.152  -0.181   0.832  H122  NT5  36  
NT5  H121  H6   H  0  0  N  N  N  27.474  -1.796   95.602  -0.510  -1.521   1.950  H121  NT5  37  
NT5  H151  H7   H  0  0  N  N  N  25.419   0.214   97.991   0.755   0.672   2.941  H151  NT5  38  
NT5  H171  H8   H  0  0  N  N  N  29.119   0.033  100.117   0.716   4.536   1.138  H171  NT5  39  
NT5  H181  H9   H  0  0  N  N  N  29.366  -2.322   99.484   2.162   3.729  -0.679  H181  NT5  40  
NT5  H21   H10  H  0  1  N  N  N  23.474  -3.115   95.672   1.504  -3.361   2.177  H21   NT5  41  
NT5  H211  H11  H  0  0  N  N  N  26.111  -6.600   97.004   4.451  -1.573  -2.084  H211  NT5  42  
NT5  H221  H12  H  0  0  N  N  N  28.380  -7.602   97.152   5.378   0.004  -3.767  H221  NT5  43  
NT5  H231  H13  H  0  0  N  N  N  30.232  -6.135   97.884   4.815   2.418  -3.578  H231  NT5  44  
NT5  H241  H14  H  0  0  N  N  N  26.556   1.800  100.433   0.382   3.545   4.063  H241  NT5  45  
NT5  H243  H15  H  0  0  N  N  N  28.096   2.187   99.593  -0.872   3.958   2.869  H243  NT5  46  
NT5  H242  H16  H  0  0  N  N  N  26.540   2.264   98.698  -0.857   2.345   3.622  H242  NT5  47  
NT5  H32   H17  H  0  1  N  N  N  23.518  -1.308   94.153   1.657  -3.376  -0.874  H32   NT5  48  
NT5  H31   H18  H  0  1  N  N  N  23.281  -2.786   93.160   1.469  -4.794   0.187  H31   NT5  49  
NT5  H42   H19  H  0  1  N  N  N  25.545  -2.733   92.376  -0.717  -4.117  -0.750  H42   NT5  50  
NT5  H41   H20  H  0  1  N  N  N  24.901  -1.064   92.217  -0.692  -3.872   1.012  H41   NT5  51  
NT5  H51   H21  H  0  1  N  N  N  27.233  -1.278   93.151  -0.165  -1.712  -1.079  H51   NT5  52  
NT5  H61   H22  H  0  1  N  N  N  25.934   0.761   93.411  -2.546  -2.508  -0.945  H61   NT5  53  
NT5  H62   H23  H  0  1  N  N  N  25.195   0.122   94.918  -2.541  -2.120   0.792  H62   NT5  54  
NT5  H81   H24  H  0  1  N  N  N  29.052   1.795   96.473  -3.322   1.899  -1.025  H81   NT5  55  
NT5  H91   H25  H  0  1  N  N  N  29.052   4.154   97.264  -5.728   2.499  -1.153  H91   NT5  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NT5  C4   C3    SING  N  N   1  
NT5  C4   C5    SING  N  N   2  
NT5  C3   C2    SING  N  N   3  
NT5  C5   C6    SING  N  N   4  
NT5  C5   C12   SING  N  N   5  
NT5  C6   O1    SING  N  N   6  
NT5  C1   C2    SING  N  N   7  
NT5  C12  N2    SING  N  N   8  
NT5  C2   N2    SING  N  N   9  
NT5  O1   C7    SING  N  N  10  
NT5  N1   C7    DOUB  Y  N  11  
NT5  N1   C11   SING  Y  N  12  
NT5  C7   C8    SING  Y  N  13  
NT5  C11  C10   DOUB  Y  N  14  
NT5  N2   C13   SING  N  N  15  
NT5  C8   C9    DOUB  Y  N  16  
NT5  C10  C9    SING  Y  N  17  
NT5  C10  F1    SING  N  N  18  
NT5  C13  O2    DOUB  N  N  19  
NT5  C13  C14   SING  N  N  20  
NT5  C21  C22   DOUB  Y  N  21  
NT5  C21  N3    SING  Y  N  22  
NT5  C22  C23   SING  Y  N  23  
NT5  N3   C20   DOUB  Y  N  24  
NT5  C23  N4    DOUB  Y  N  25  
NT5  C14  C15   DOUB  Y  N  26  
NT5  C14  C19   SING  Y  N  27  
NT5  C20  N4    SING  Y  N  28  
NT5  C20  C19   SING  N  N  29  
NT5  C15  C16   SING  Y  N  30  
NT5  C19  C18   DOUB  Y  N  31  
NT5  C16  C24   SING  N  N  32  
NT5  C16  C17   DOUB  Y  N  33  
NT5  C18  C17   SING  Y  N  34  
NT5  C1   H12   SING  N  N  35  
NT5  C1   H11   SING  N  N  36  
NT5  C1   H13   SING  N  N  37  
NT5  C11  H111  SING  N  N  38  
NT5  C12  H122  SING  N  N  39  
NT5  C12  H121  SING  N  N  40  
NT5  C15  H151  SING  N  N  41  
NT5  C17  H171  SING  N  N  42  
NT5  C18  H181  SING  N  N  43  
NT5  C2   H21   SING  N  N  44  
NT5  C21  H211  SING  N  N  45  
NT5  C22  H221  SING  N  N  46  
NT5  C23  H231  SING  N  N  47  
NT5  C24  H241  SING  N  N  48  
NT5  C24  H243  SING  N  N  49  
NT5  C24  H242  SING  N  N  50  
NT5  C3   H32   SING  N  N  51  
NT5  C3   H31   SING  N  N  52  
NT5  C4   H42   SING  N  N  53  
NT5  C4   H41   SING  N  N  54  
NT5  C5   H51   SING  N  N  55  
NT5  C6   H61   SING  N  N  56  
NT5  C6   H62   SING  N  N  57  
NT5  C8   H81   SING  N  N  58  
NT5  C9   H91   SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NT5  InChI             InChI                 1.03   "InChI=1S/C24H25FN4O2/c1-16-4-8-20(23-26-10-3-11-27-23)21(12-16)24(30)29-14-18(6-5-17(29)2)15-31-22-9-7-19(25)13-28-22/h3-4,7-13,17-18H,5-6,14-15H2,1-2H3/t17-,18-/m1/s1"  
NT5  InChIKey          InChI                 1.03   NPFDWHQSDBWQLH-QZTJIDSGSA-N  
NT5  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1CC[C@@H](COc2ccc(F)cn2)CN1C(=O)c3cc(C)ccc3c4ncccn4"  
NT5  SMILES            CACTVS                3.385  "C[CH]1CC[CH](COc2ccc(F)cn2)CN1C(=O)c3cc(C)ccc3c4ncccn4"  
NT5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(c(c1)C(=O)N2C[C@@H](CC[C@H]2C)COc3ccc(cn3)F)c4ncccn4"  
NT5  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(c(c1)C(=O)N2CC(CCC2C)COc3ccc(cn3)F)c4ncccn4"  
#
_pdbx_chem_comp_identifier.comp_id          NT5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(2~{R},5~{R})-5-[(5-fluoranylpyridin-2-yl)oxymethyl]-2-methyl-piperidin-1-yl]-(5-methyl-2-pyrimidin-2-yl-phenyl)methanone"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NT5  "Create component"  2019-12-12  PDBE  
NT5  "Initial release"   2020-01-01  RCSB  
##
