data_OR5
# 
_chem_comp.id                                    OR5 
_chem_comp.name                                  
;OPEN FORM OF RIBOFURANOSE-5'-PHOSPHATE
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H13 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-08-19 
_chem_comp.pdbx_modified_date                    2008-10-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      R5P 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        232.126 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OR5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1U9Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OR5 "C1'"  C1*  C 0 1 N N N -27.124 54.080 20.180 4.235  -0.681 0.391  "C1'"  OR5 1  
OR5 "O1'"  O1*  O 0 1 N N N -27.801 55.011 19.787 5.483  -0.273 -0.175 "O1'"  OR5 2  
OR5 "C2'"  C2*  C 0 1 N N S -26.805 53.976 21.645 3.097  0.103  -0.266 "C2'"  OR5 3  
OR5 "O2'"  O2*  O 0 1 N N N -26.086 55.167 22.055 3.224  1.489  0.058  "O2'"  OR5 4  
OR5 "C3'"  C3*  C 0 1 N N S -25.939 52.710 21.959 1.754  -0.420 0.249  "C3'"  OR5 5  
OR5 "O3'"  O3*  O 0 1 N N N -26.757 51.577 21.511 1.627  -1.806 -0.075 "O3'"  OR5 6  
OR5 "C4'"  C4*  C 0 1 N N R -25.639 52.604 23.492 0.616  0.364  -0.408 "C4'"  OR5 7  
OR5 "O4'"  O4*  O 0 1 N N N -24.846 53.686 23.906 0.744  1.750  -0.083 "O4'"  OR5 8  
OR5 "C5'"  C5*  C 0 1 N N N -24.965 51.253 23.904 -0.726 -0.158 0.107  "C5'"  OR5 9  
OR5 "O5'"  O5*  O 0 1 N N N -25.029 51.029 25.308 -1.790 0.492  -0.591 "O5'"  OR5 10 
OR5 P      P    P 0 1 N N N -25.232 49.588 26.029 -3.165 -0.103 -0.002 P      OR5 11 
OR5 O1P    O1P  O 0 1 N N N -24.380 48.479 25.276 -3.154 -1.578 -0.118 O1P    OR5 12 
OR5 O2P    O2P  O 0 1 N N N -24.761 49.773 27.532 -3.310 0.313  1.547  O2P    OR5 13 
OR5 O3P    O3P  O 0 1 N N N -26.626 49.133 26.007 -4.408 0.492  -0.836 O3P    OR5 14 
OR5 "H1'1" 1H1* H 0 0 N N N -27.597 53.126 19.847 4.089  -1.747 0.218  "H1'1" OR5 15 
OR5 "H1'2" 2H1* H 0 0 N N N -26.170 54.061 19.603 4.241  -0.484 1.463  "H1'2" OR5 16 
OR5 "HO'1" 1HO* H 0 0 N N N -28.002 55.076 18.861 6.171  -0.790 0.265  "HO'1" OR5 17 
OR5 "H2'"  H2*  H 0 1 N N N -27.763 53.882 22.207 3.146  -0.023 -1.347 "H2'"  OR5 18 
OR5 "HO'2" 2HO* H 0 0 N N N -25.884 55.101 22.981 3.177  1.556  1.022  "HO'2" OR5 19 
OR5 "H3'"  H3*  H 0 1 N N N -24.948 52.743 21.448 1.706  -0.294 1.330  "H3'"  OR5 20 
OR5 "HO'3" 3HO* H 0 0 N N N -26.231 50.808 21.701 1.675  -1.873 -1.039 "HO'3" OR5 21 
OR5 "H4'"  H4*  H 0 1 N N N -26.626 52.634 24.009 0.665  0.238  -1.489 "H4'"  OR5 22 
OR5 "HO'4" 4HO* H 0 0 N N N -24.664 53.621 24.836 0.696  1.818  0.880  "HO'4" OR5 23 
OR5 "H5'1" 1H5* H 0 0 N N N -25.399 50.395 23.338 -0.786 -1.234 -0.061 "H5'1" OR5 24 
OR5 "H5'2" 2H5* H 0 0 N N N -23.915 51.195 23.533 -0.812 0.048  1.174  "H5'2" OR5 25 
OR5 HOP2   2HOP H 0 0 N N N -24.879 48.930 27.953 -3.313 1.280  1.578  HOP2   OR5 26 
OR5 HOP3   3HOP H 0 0 N N N -26.744 48.290 26.428 -5.210 0.112  -0.452 HOP3   OR5 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OR5 "C1'" "O1'"  SING N N 1  
OR5 "C1'" "C2'"  SING N N 2  
OR5 "C1'" "H1'1" SING N N 3  
OR5 "C1'" "H1'2" SING N N 4  
OR5 "O1'" "HO'1" SING N N 5  
OR5 "C2'" "O2'"  SING N N 6  
OR5 "C2'" "C3'"  SING N N 7  
OR5 "C2'" "H2'"  SING N N 8  
OR5 "O2'" "HO'2" SING N N 9  
OR5 "C3'" "O3'"  SING N N 10 
OR5 "C3'" "C4'"  SING N N 11 
OR5 "C3'" "H3'"  SING N N 12 
OR5 "O3'" "HO'3" SING N N 13 
OR5 "C4'" "O4'"  SING N N 14 
OR5 "C4'" "C5'"  SING N N 15 
OR5 "C4'" "H4'"  SING N N 16 
OR5 "O4'" "HO'4" SING N N 17 
OR5 "C5'" "O5'"  SING N N 18 
OR5 "C5'" "H5'1" SING N N 19 
OR5 "C5'" "H5'2" SING N N 20 
OR5 "O5'" P      SING N N 21 
OR5 P     O1P    DOUB N N 22 
OR5 P     O2P    SING N N 23 
OR5 P     O3P    SING N N 24 
OR5 O2P   HOP2   SING N N 25 
OR5 O3P   HOP3   SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OR5 SMILES           ACDLabs              10.04 "O=P(O)(O)OCC(O)C(O)C(O)CO"                                                                              
OR5 InChI            InChI                1.02b "InChI=1/C5H13O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4+,5-/m0/s1/f/h10-11H" 
OR5 InChIKey         InChI                1.02b VJDOAZKNBQCAGE-UYXRDBCVDP                                                                                
OR5 SMILES_CANONICAL CACTVS               3.341 "OC[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O"                                                                
OR5 SMILES           CACTVS               3.341 "OC[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O"                                                                   
OR5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)O"                                                             
OR5 SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(C(COP(=O)(O)O)O)O)O)O"                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OR5 "SYSTEMATIC NAME" ACDLabs              10.04 5-O-phosphono-D-ribitol                                        
OR5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4S)-2,3,4,5-tetrahydroxypentyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OR5 "Create component" 2004-08-19 RCSB 
# 
