data_PR5
# 
_chem_comp.id                                    PR5 
_chem_comp.name                                  
;PURINE RIBOSIDE-5'-MONOPHOSPHATE
;
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C10 H13 N4 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               A 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2005-09-21 
_chem_comp.pdbx_modified_date                    2009-07-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        332.207 
_chem_comp.one_letter_code                       A 
_chem_comp.three_letter_code                     PR5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PR5 P      P    P 0 1 N N N 16.432 34.026 22.587 6.145  3.523  -0.251 P      PR5 1  
PR5 OP1    O1P  O 0 1 N N N 15.988 32.733 21.998 6.560  4.952  -0.444 OP1    PR5 2  
PR5 OP2    O2P  O 0 1 N N N 16.421 35.246 21.752 6.456  2.538  -1.495 OP2    PR5 3  
PR5 "O5'"  O5*  O 0 1 N N N 15.578 34.346 23.896 4.566  3.301  0.029  "O5'"  PR5 4  
PR5 "C5'"  C5*  C 0 1 N N N 15.567 35.650 24.493 4.092  1.980  0.223  "C5'"  PR5 5  
PR5 "C4'"  C4*  C 0 1 N N R 14.154 36.004 24.882 2.595  2.031  0.465  "C4'"  PR5 6  
PR5 "O4'"  O4*  O 0 1 N N N 14.202 36.994 25.949 1.933  2.574  -0.689 "O4'"  PR5 7  
PR5 "C1'"  C1*  C 0 1 N N R 13.652 38.198 25.476 0.622  1.976  -0.784 "C1'"  PR5 8  
PR5 "C3'"  C3*  C 0 1 N N S 13.398 36.671 23.729 1.969  0.663  0.677  "C3'"  PR5 9  
PR5 "O3'"  O3*  O 0 1 N N N 12.027 36.311 23.836 2.143  0.197  1.998  "O3'"  PR5 10 
PR5 "C2'"  C2*  C 0 1 N N R 13.618 38.165 23.957 0.518  0.913  0.310  "C2'"  PR5 11 
PR5 "O2'"  O2*  O 0 1 N N N 12.596 38.999 23.438 -0.210 1.445  1.415  "O2'"  PR5 12 
PR5 N9     N9   N 0 1 Y N N 14.237 39.400 26.046 0.424  1.450  -2.136 N9     PR5 13 
PR5 C4     C4   C 0 1 Y N N 13.578 40.161 26.958 -0.749 1.407  -2.836 C4     PR5 14 
PR5 C8     C8   C 0 1 Y N N 15.451 39.966 25.808 1.390  0.903  -2.940 C8     PR5 15 
PR5 N7     N7   N 0 1 Y N N 15.572 41.049 26.539 0.909  0.516  -4.103 N7     PR5 16 
PR5 C5     C5   C 0 1 Y N N 14.442 41.226 27.276 -0.427 0.826  -4.052 C5     PR5 17 
PR5 C6     C6   C 0 1 Y N N 13.998 42.168 28.206 -1.463 0.664  -4.966 C6     PR5 18 
PR5 N1     N1   N 0 1 Y N N 12.786 42.017 28.747 -2.709 1.074  -4.629 N1     PR5 19 
PR5 C2     C2   C 0 1 Y N N 12.000 40.995 28.418 -2.876 1.626  -3.403 C2     PR5 20 
PR5 N3     N3   N 0 1 Y N N 12.378 40.082 27.543 -1.956 1.836  -2.436 N3     PR5 21 
PR5 OP3    O3P  O 0 1 N Y N ?      ?      ?      6.843  2.773  1.000  OP3    PR5 22 
PR5 HOP2   2HOP H 0 0 N N N 15.523 35.500 21.573 7.351  2.548  -1.896 HOP2   PR5 23 
PR5 "H5'"  1H5* H 0 1 N N N 15.949 36.389 23.774 4.308  1.388  -0.668 "H5'"  PR5 24 
PR5 "H5''" 2H5* H 0 0 N N N 16.207 35.651 25.388 4.597  1.541  1.085  "H5''" PR5 25 
PR5 "H4'"  H4*  H 0 1 N N N 13.650 35.072 25.176 2.399  2.693  1.317  "H4'"  PR5 26 
PR5 "H1'"  H1*  H 0 1 N N N 12.616 38.267 25.840 -0.125 2.769  -0.673 "H1'"  PR5 27 
PR5 "H3'"  H3*  H 0 1 N N N 13.734 36.374 22.725 2.403  -0.065 -0.019 "H3'"  PR5 28 
PR5 "HO3'" H3T  H 0 0 N Y N 11.949 35.365 23.860 3.003  0.531  2.294  "HO3'" PR5 29 
PR5 "H2'"  H2*  H 0 1 N N N 14.510 38.555 23.445 -0.000 0.001  -0.003 "H2'"  PR5 30 
PR5 "HO2'" 2HO* H 0 0 N N N 11.801 38.492 23.322 -1.062 1.768  1.071  "HO2'" PR5 31 
PR5 H8     H8   H 0 1 N N N 16.197 39.585 25.126 2.420  0.814  -2.624 H8     PR5 32 
PR5 H6     H6   H 0 1 N N N 14.623 43.004 28.483 -1.340 0.224  -5.948 H6     PR5 33 
PR5 H3     H3   H 0 1 N N N 11.027 40.910 28.879 -3.886 1.943  -3.167 H3     PR5 34 
PR5 HOP3   3HOP H 0 0 N N N 0.283  0.825  0.376  7.814  2.842  1.113  HOP3   PR5 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PR5 P     OP1    DOUB N N 1  
PR5 P     OP2    SING N N 2  
PR5 P     "O5'"  SING N N 3  
PR5 P     OP3    SING N N 4  
PR5 OP2   HOP2   SING N N 5  
PR5 "O5'" "C5'"  SING N N 6  
PR5 "C5'" "C4'"  SING N N 7  
PR5 "C5'" "H5'"  SING N N 8  
PR5 "C5'" "H5''" SING N N 9  
PR5 "C4'" "O4'"  SING N N 10 
PR5 "C4'" "C3'"  SING N N 11 
PR5 "C4'" "H4'"  SING N N 12 
PR5 "O4'" "C1'"  SING N N 13 
PR5 "C1'" "C2'"  SING N N 14 
PR5 "C1'" N9     SING N N 15 
PR5 "C1'" "H1'"  SING N N 16 
PR5 "C3'" "O3'"  SING N N 17 
PR5 "C3'" "C2'"  SING N N 18 
PR5 "C3'" "H3'"  SING N N 19 
PR5 "O3'" "HO3'" SING N N 20 
PR5 "C2'" "O2'"  SING N N 21 
PR5 "C2'" "H2'"  SING N N 22 
PR5 "O2'" "HO2'" SING N N 23 
PR5 N9    C4     SING Y N 24 
PR5 N9    C8     SING Y N 25 
PR5 C4    C5     DOUB Y N 26 
PR5 C4    N3     SING Y N 27 
PR5 C8    N7     DOUB Y N 28 
PR5 C8    H8     SING N N 29 
PR5 N7    C5     SING Y N 30 
PR5 C5    C6     SING Y N 31 
PR5 C6    N1     DOUB Y N 32 
PR5 C6    H6     SING N N 33 
PR5 N1    C2     SING Y N 34 
PR5 C2    N3     DOUB Y N 35 
PR5 C2    H3     SING N N 36 
PR5 OP3   HOP3   SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PR5 SMILES           ACDLabs              10.04 "O=P(O)(O)OCC3OC(n2cnc1cncnc12)C(O)C3O"                                                                                                                     
PR5 InChI            InChI                1.02b "InChI=1/C10H13N4O7P/c15-7-6(2-20-22(17,18)19)21-10(8(7)16)14-4-13-5-1-11-3-12-9(5)14/h1,3-4,6-8,10,15-16H,2H2,(H2,17,18,19)/t6-,7-,8-,10-/m1/s1/f/h17-18H" 
PR5 InChIKey         InChI                1.02b MCWDCZIDTUQRHK-DUAZENTCDO                                                                                                                                   
PR5 SMILES_CANONICAL CACTVS               3.341 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3cncnc23"                                                                                                
PR5 SMILES           CACTVS               3.341 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3cncnc23"                                                                                                       
PR5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O"                                                                                             
PR5 SMILES           "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PR5 "SYSTEMATIC NAME" ACDLabs              10.04 "9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine"                                  
PR5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-3,4-dihydroxy-5-purin-9-yl-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PR5 "Create component" 2005-09-21 RCSB 
# 
