data_EB6
#

_chem_comp.id                                   EB6
_chem_comp.name                                 "methyl (2~{S})-3-[4-[3-(4-methoxy-2-oxidanyl-phenyl)prop-2-ynoyloxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C33 H27 N O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-12-06
_chem_comp.pdbx_modified_date                   2020-02-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       549.570
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    EB6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6JF0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EB6  C4   C1   C  0  1  Y  N  N  24.237  18.329  12.666  -4.298  -3.522  -1.663  C4   EB6   1  
EB6  C2   C2   C  0  1  Y  N  N  24.388  18.329  10.270  -6.436  -3.158  -2.681  C2   EB6   2  
EB6  O4   O1   O  0  1  N  N  N  15.998  16.198  10.538   2.920   1.018  -1.990  O4   EB6   3  
EB6  C23  C3   C  0  1  N  N  N  15.418  17.036  11.222   3.278   0.764  -0.856  C23  EB6   4  
EB6  C24  C4   C  0  1  N  N  N  15.253  18.194  10.777   4.656   0.479  -0.587  C24  EB6   5  
EB6  C25  C5   C  0  1  N  N  N  15.085  19.275  10.331   5.785   0.245  -0.367  C25  EB6   6  
EB6  C26  C6   C  0  1  Y  N  N  14.928  20.462   9.869   7.162  -0.040  -0.098  C26  EB6   7  
EB6  C31  C7   C  0  1  Y  N  N  15.873  21.013   8.869   8.104  -0.022  -1.141  C31  EB6   8  
EB6  O6   O2   O  0  1  N  N  N  16.922  20.267   8.427   7.712   0.261  -2.409  O6   EB6   9  
EB6  C30  C8   C  0  1  Y  N  N  15.677  22.305   8.394   9.433  -0.294  -0.868  C30  EB6  10  
EB6  C29  C9   C  0  1  Y  N  N  14.601  23.058   8.853   9.828  -0.582   0.431  C29  EB6  11  
EB6  O5   O3   O  0  1  N  N  N  14.424  24.329   8.376  11.132  -0.848   0.697  O5   EB6  12  
EB6  C32  C10  C  0  1  N  N  N  14.924  25.442   9.119  11.472  -1.136   2.055  C32  EB6  13  
EB6  C28  C11  C  0  1  Y  N  N  13.709  22.536   9.795   8.893  -0.599   1.462  C28  EB6  14  
EB6  C27  C12  C  0  1  Y  N  N  13.868  21.253  10.296   7.579  -0.333   1.207  C27  EB6  15  
EB6  O3   O4   O  0  1  N  N  N  14.930  16.693  12.554   2.378   0.751   0.150  O3   EB6  16  
EB6  C20  C13  C  0  1  Y  N  N  15.797  16.679  13.612   1.102   1.127  -0.131  C20  EB6  17  
EB6  C19  C14  C  0  1  Y  N  N  17.070  16.133  13.467   0.252   0.256  -0.798  C19  EB6  18  
EB6  C18  C15  C  0  1  Y  N  N  17.944  16.120  14.542  -1.044   0.641  -1.082  C18  EB6  19  
EB6  C21  C16  C  0  1  Y  N  N  15.409  17.223  14.835   0.647   2.380   0.253  C21  EB6  20  
EB6  C22  C17  C  0  1  Y  N  N  16.295  17.211  15.908  -0.650   2.760  -0.034  C22  EB6  21  
EB6  C16  C18  C  0  1  Y  N  N  17.559  16.659  15.766  -1.494   1.892  -0.703  C16  EB6  22  
EB6  C15  C19  C  0  1  N  N  N  18.522  16.654  16.932  -2.908   2.309  -1.015  C15  EB6  23  
EB6  C13  C20  C  0  1  N  N  S  19.207  18.014  17.040  -3.824   1.911   0.144  C13  EB6  24  
EB6  C14  C21  C  0  1  N  N  N  19.364  18.389  18.479  -5.214   2.435  -0.111  C14  EB6  25  
EB6  O2   O5   O  0  1  N  N  N  19.757  17.571  19.288  -6.143   1.668  -0.193  O2   EB6  26  
EB6  O1   O6   O  0  1  N  N  N  19.054  19.737  18.924  -5.419   3.755  -0.247  O1   EB6  27  
EB6  C17  C22  C  0  1  N  N  N  20.097  20.561  19.473  -6.783   4.188  -0.491  C17  EB6  28  
EB6  N    N1   N  0  1  N  N  N  20.464  17.981  16.325  -3.866   0.450   0.253  N    EB6  29  
EB6  C12  C23  C  0  1  Y  N  N  21.102  19.120  15.993  -4.170  -0.146   1.469  C12  EB6  30  
EB6  C11  C24  C  0  1  Y  N  N  20.948  20.271  16.753  -4.555   0.633   2.552  C11  EB6  31  
EB6  C10  C25  C  0  1  Y  N  N  21.547  21.452  16.355  -4.856   0.038   3.760  C10  EB6  32  
EB6  C9   C26  C  0  1  Y  N  N  22.278  21.521  15.192  -4.780  -1.339   3.903  C9   EB6  33  
EB6  C8   C27  C  0  1  Y  N  N  22.459  20.423  14.379  -4.402  -2.130   2.840  C8   EB6  34  
EB6  C7   C28  C  0  1  Y  N  N  21.885  19.204  14.732  -4.097  -1.543   1.608  C7   EB6  35  
EB6  C6   C29  C  0  1  N  N  N  22.059  18.003  13.853  -3.692  -2.382   0.468  C6   EB6  36  
EB6  O    O7   O  0  1  N  N  N  21.522  16.951  14.157  -2.570  -2.851   0.426  O    EB6  37  
EB6  C5   C30  C  0  1  Y  N  N  22.869  18.117  12.595  -4.647  -2.654  -0.627  C5   EB6  38  
EB6  C    C31  C  0  1  Y  N  N  22.253  18.021  11.355  -5.903  -2.043  -0.629  C    EB6  39  
EB6  C3   C32  C  0  1  Y  N  N  24.994  18.446  11.506  -5.193  -3.767  -2.684  C3   EB6  40  
EB6  C1   C33  C  0  1  Y  N  N  23.014  18.124  10.198  -6.790  -2.301  -1.654  C1   EB6  41  
EB6  H1   H1   H  0  1  N  N  N  24.718  18.404  13.630  -3.329  -3.998  -1.667  H1   EB6  42  
EB6  H2   H2   H  0  1  N  N  N  24.976  18.396   9.367  -7.132  -3.353  -3.483  H2   EB6  43  
EB6  H3   H3   H  0  1  N  N  N  16.907  19.417   8.850   7.745   1.202  -2.630  H3   EB6  44  
EB6  H4   H4   H  0  1  N  N  N  16.360  22.724   7.669  10.163  -0.282  -1.665  H4   EB6  45  
EB6  H5   H5   H  0  1  N  N  N  14.690  26.375   8.585  11.212  -0.284   2.683  H5   EB6  46  
EB6  H6   H6   H  0  1  N  N  N  14.453  25.461  10.113  10.920  -2.015   2.388  H6   EB6  47  
EB6  H7   H7   H  0  1  N  N  N  16.014  25.347   9.232  12.542  -1.330   2.128  H7   EB6  48  
EB6  H8   H8   H  0  1  N  N  N  12.883  23.142  10.138   9.210  -0.825   2.470  H8   EB6  49  
EB6  H9   H9   H  0  1  N  N  N  13.166  20.867  11.020   6.860  -0.344   2.013  H9   EB6  50  
EB6  H10  H10  H  0  1  N  N  N  17.376  15.720  12.517   0.603  -0.721  -1.094  H10  EB6  51  
EB6  H11  H11  H  0  1  N  N  N  18.928  15.690  14.430  -1.706  -0.036  -1.601  H11  EB6  52  
EB6  H12  H12  H  0  1  N  N  N  14.425  17.652  14.950   1.305   3.057   0.776  H12  EB6  53  
EB6  H13  H13  H  0  1  N  N  N  15.997  17.634  16.856  -1.005   3.735   0.265  H13  EB6  54  
EB6  H14  H14  H  0  1  N  N  N  17.970  16.448  17.861  -2.946   3.390  -1.153  H14  EB6  55  
EB6  H15  H15  H  0  1  N  N  N  19.281  15.874  16.776  -3.240   1.815  -1.928  H15  EB6  56  
EB6  H16  H16  H  0  1  N  N  N  18.550  18.757  16.564  -3.441   2.334   1.072  H16  EB6  57  
EB6  H17  H17  H  0  1  N  N  N  19.682  21.540  19.754  -7.147   3.739  -1.415  H17  EB6  58  
EB6  H18  H18  H  0  1  N  N  N  20.519  20.073  20.364  -7.417   3.878   0.339  H18  EB6  59  
EB6  H19  H19  H  0  1  N  N  N  20.888  20.700  18.722  -6.808   5.274  -0.581  H19  EB6  60  
EB6  H20  H20  H  0  1  N  N  N  20.292  17.491  15.470  -3.681  -0.100  -0.524  H20  EB6  61  
EB6  H21  H21  H  0  1  N  N  N  20.359  20.244  17.658  -4.617   1.706   2.450  H21  EB6  62  
EB6  H22  H22  H  0  1  N  N  N  21.439  22.335  16.968  -5.154   0.648   4.600  H22  EB6  63  
EB6  H23  H23  H  0  1  N  N  N  22.723  22.463  14.908  -5.017  -1.794   4.853  H23  EB6  64  
EB6  H24  H24  H  0  1  N  N  N  23.042  20.507  13.474  -4.348  -3.202   2.956  H24  EB6  65  
EB6  H25  H25  H  0  1  N  N  N  21.186  17.867  11.290  -6.180  -1.370   0.169  H25  EB6  66  
EB6  H26  H26  H  0  1  N  N  N  26.056  18.628  11.571  -4.923  -4.435  -3.488  H26  EB6  67  
EB6  H27  H27  H  0  1  N  N  N  22.535  18.044   9.233  -7.761  -1.829  -1.657  H27  EB6  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EB6  O5   C29  SING  N  N   1  
EB6  O5   C32  SING  N  N   2  
EB6  C30  C29  DOUB  Y  N   3  
EB6  C30  C31  SING  Y  N   4  
EB6  O6   C31  SING  N  N   5  
EB6  C29  C28  SING  Y  N   6  
EB6  C31  C26  DOUB  Y  N   7  
EB6  C28  C27  DOUB  Y  N   8  
EB6  C26  C27  SING  Y  N   9  
EB6  C26  C25  SING  N  N  10  
EB6  C1   C2   DOUB  Y  N  11  
EB6  C1   C    SING  Y  N  12  
EB6  C2   C3   SING  Y  N  13  
EB6  C25  C24  TRIP  N  N  14  
EB6  O4   C23  DOUB  N  N  15  
EB6  C24  C23  SING  N  N  16  
EB6  C23  O3   SING  N  N  17  
EB6  C    C5   DOUB  Y  N  18  
EB6  C3   C4   DOUB  Y  N  19  
EB6  O3   C20  SING  N  N  20  
EB6  C5   C4   SING  Y  N  21  
EB6  C5   C6   SING  N  N  22  
EB6  C19  C20  DOUB  Y  N  23  
EB6  C19  C18  SING  Y  N  24  
EB6  C20  C21  SING  Y  N  25  
EB6  C6   O    DOUB  N  N  26  
EB6  C6   C7   SING  N  N  27  
EB6  C8   C7   DOUB  Y  N  28  
EB6  C8   C9   SING  Y  N  29  
EB6  C18  C16  DOUB  Y  N  30  
EB6  C7   C12  SING  Y  N  31  
EB6  C21  C22  DOUB  Y  N  32  
EB6  C9   C10  DOUB  Y  N  33  
EB6  C16  C22  SING  Y  N  34  
EB6  C16  C15  SING  N  N  35  
EB6  C12  N    SING  N  N  36  
EB6  C12  C11  DOUB  Y  N  37  
EB6  N    C13  SING  N  N  38  
EB6  C10  C11  SING  Y  N  39  
EB6  C15  C13  SING  N  N  40  
EB6  C13  C14  SING  N  N  41  
EB6  C14  O1   SING  N  N  42  
EB6  C14  O2   DOUB  N  N  43  
EB6  O1   C17  SING  N  N  44  
EB6  C4   H1   SING  N  N  45  
EB6  C2   H2   SING  N  N  46  
EB6  O6   H3   SING  N  N  47  
EB6  C30  H4   SING  N  N  48  
EB6  C32  H5   SING  N  N  49  
EB6  C32  H6   SING  N  N  50  
EB6  C32  H7   SING  N  N  51  
EB6  C28  H8   SING  N  N  52  
EB6  C27  H9   SING  N  N  53  
EB6  C19  H10  SING  N  N  54  
EB6  C18  H11  SING  N  N  55  
EB6  C21  H12  SING  N  N  56  
EB6  C22  H13  SING  N  N  57  
EB6  C15  H14  SING  N  N  58  
EB6  C15  H15  SING  N  N  59  
EB6  C13  H16  SING  N  N  60  
EB6  C17  H17  SING  N  N  61  
EB6  C17  H18  SING  N  N  62  
EB6  C17  H19  SING  N  N  63  
EB6  N    H20  SING  N  N  64  
EB6  C11  H21  SING  N  N  65  
EB6  C10  H22  SING  N  N  66  
EB6  C9   H23  SING  N  N  67  
EB6  C8   H24  SING  N  N  68  
EB6  C    H25  SING  N  N  69  
EB6  C3   H26  SING  N  N  70  
EB6  C1   H27  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EB6  InChI             InChI                 1.03   "InChI=1S/C33H27NO7/c1-39-26-18-14-23(30(35)21-26)15-19-31(36)41-25-16-12-22(13-17-25)20-29(33(38)40-2)34-28-11-7-6-10-27(28)32(37)24-8-4-3-5-9-24/h3-14,16-18,21,29,34-35H,20H2,1-2H3/t29-/m0/s1"  
EB6  InChIKey          InChI                 1.03   CEHNFAIQCQNZKE-LJAQVGFWSA-N  
EB6  SMILES_CANONICAL  CACTVS                3.385  "COC(=O)[C@H](Cc1ccc(OC(=O)C#Cc2ccc(OC)cc2O)cc1)Nc3ccccc3C(=O)c4ccccc4"  
EB6  SMILES            CACTVS                3.385  "COC(=O)[CH](Cc1ccc(OC(=O)C#Cc2ccc(OC)cc2O)cc1)Nc3ccccc3C(=O)c4ccccc4"  
EB6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1ccc(c(c1)O)C#CC(=O)Oc2ccc(cc2)C[C@@H](C(=O)OC)Nc3ccccc3C(=O)c4ccccc4"  
EB6  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1ccc(c(c1)O)C#CC(=O)Oc2ccc(cc2)CC(C(=O)OC)Nc3ccccc3C(=O)c4ccccc4"  
#
_pdbx_chem_comp_identifier.comp_id          EB6
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "methyl (2~{S})-3-[4-[3-(4-methoxy-2-oxidanyl-phenyl)prop-2-ynoyloxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EB6  "Create component"  2019-12-06  PDBJ  
EB6  "Initial release"   2020-02-12  RCSB  
##
