data_TY6
# 
_chem_comp.id                                    TY6 
_chem_comp.name                                  "(2~{S},3~{R},4~{S},5~{S},6~{S})-6-[(2-azanylhydrazinyl)methyl]oxane-2,3,4,5-tetrol" 
_chem_comp.type                                  "D-saccharide, alpha linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C6 H15 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-11 
_chem_comp.pdbx_modified_date                    2023-09-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        209.200 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TY6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8JA9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TY6 C02 C1  C 0 1 N N S 7.356  -10.792 -16.926 -0.638 -1.450 0.134  C02 TY6 1  
TY6 C03 C2  C 0 1 N N S 8.444  -11.374 -17.815 0.348  -0.372 -0.324 C03 TY6 2  
TY6 C04 C3  C 0 1 N N N 9.161  -10.482 -18.650 1.710  -0.617 0.329  C04 TY6 3  
TY6 C09 C4  C 0 1 N N S 7.158  -13.268 -18.375 -1.403 1.256  -0.515 C09 TY6 4  
TY6 C22 C5  C 0 1 N N R 6.228  -12.904 -17.243 -2.460 0.244  -0.065 C22 TY6 5  
TY6 C24 C6  C 0 1 N N S 6.064  -11.457 -17.104 -2.014 -1.163 -0.476 C24 TY6 6  
TY6 N05 N1  N 0 1 N N N 10.498 -10.403 -18.233 2.656  0.417  -0.110 N05 TY6 7  
TY6 N06 N2  N 0 1 N N N 10.775 -10.630 -16.879 3.964  0.216  0.491  N06 TY6 8  
TY6 N07 N3  N 0 1 N N N 11.370 -11.867 -16.790 4.999  0.134  -0.527 N07 TY6 9  
TY6 O01 O1  O 0 1 N N N 7.308  -9.430  -16.980 -0.734 -1.436 1.559  O01 TY6 10 
TY6 O08 O2  O 0 1 N N N 8.486  -12.738 -18.191 -0.141 0.914  0.062  O08 TY6 11 
TY6 O23 O3  O 0 1 N N N 5.020  -13.590 -17.345 -2.604 0.303  1.355  O23 TY6 12 
TY6 O25 O4  O 0 1 N N N 5.211  -11.071 -16.057 -1.932 -1.243 -1.900 O25 TY6 13 
TY6 O1  O5  O 0 1 N Y N 6.702  -12.857 -19.592 -1.784 2.565  -0.087 O1  TY6 14 
TY6 H1  H1  H 0 1 N N N 7.670  -11.048 -15.903 -0.289 -2.428 -0.198 H1  TY6 15 
TY6 H2  H2  H 0 1 N N N 9.208  -11.442 -17.027 0.452  -0.411 -1.408 H2  TY6 16 
TY6 H3  H3  H 0 1 N N N 8.703  -9.484  -18.595 1.606  -0.578 1.413  H3  TY6 17 
TY6 H4  H4  H 0 1 N N N 9.124  -10.845 -19.688 2.082  -1.599 0.035  H4  TY6 18 
TY6 H5  H5  H 0 1 N N N 7.236  -14.365 -18.381 -1.322 1.238  -1.602 H5  TY6 19 
TY6 H6  H6  H 0 1 N N N 6.723  -13.250 -16.324 -3.413 0.477  -0.540 H6  TY6 20 
TY6 H7  H7  H 0 1 N N N 5.634  -11.086 -18.046 -2.735 -1.895 -0.110 H7  TY6 21 
TY6 H8  H8  H 0 1 N N N 11.015 -11.077 -18.760 2.721  0.444  -1.117 H8  TY6 22 
TY6 H9  H9  H 0 1 N N N 11.395 -9.926  -16.533 4.171  0.943  1.160  H9  TY6 23 
TY6 H10 H10 H 0 1 N N N 11.584 -12.066 -15.834 5.907  -0.006 -0.109 H10 TY6 24 
TY6 H11 H11 H 0 1 N N N 10.746 -12.563 -17.144 4.793  -0.593 -1.195 H11 TY6 25 
TY6 H12 H12 H 0 1 N N N 6.616  -9.114  -16.411 -1.345 -2.093 1.919  H12 TY6 26 
TY6 H13 H13 H 0 1 N N N 4.454  -13.344 -16.623 -2.880 1.169  1.686  H13 TY6 27 
TY6 H14 H14 H 0 1 N N N 5.153  -10.123 -16.028 -2.768 -1.065 -2.353 H14 TY6 28 
TY6 H15 H15 H 0 1 N N N 5.826  -13.196 -19.734 -1.158 3.258  -0.337 H15 TY6 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TY6 O1  C09 SING N N 1  
TY6 C04 N05 SING N N 2  
TY6 C04 C03 SING N N 3  
TY6 C09 O08 SING N N 4  
TY6 C09 C22 SING N N 5  
TY6 N05 N06 SING N N 6  
TY6 O08 C03 SING N N 7  
TY6 C03 C02 SING N N 8  
TY6 O23 C22 SING N N 9  
TY6 C22 C24 SING N N 10 
TY6 C24 C02 SING N N 11 
TY6 C24 O25 SING N N 12 
TY6 O01 C02 SING N N 13 
TY6 N06 N07 SING N N 14 
TY6 C02 H1  SING N N 15 
TY6 C03 H2  SING N N 16 
TY6 C04 H3  SING N N 17 
TY6 C04 H4  SING N N 18 
TY6 C09 H5  SING N N 19 
TY6 C22 H6  SING N N 20 
TY6 C24 H7  SING N N 21 
TY6 N05 H8  SING N N 22 
TY6 N06 H9  SING N N 23 
TY6 N07 H10 SING N N 24 
TY6 N07 H11 SING N N 25 
TY6 O01 H12 SING N N 26 
TY6 O23 H13 SING N N 27 
TY6 O25 H14 SING N N 28 
TY6 O1  H15 SING N N 29 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TY6 InChI            InChI                1.06  "InChI=1S/C6H15N3O5/c7-9-8-1-2-3(10)4(11)5(12)6(13)14-2/h2-6,8-13H,1,7H2/t2-,3+,4-,5+,6-/m0/s1" 
TY6 InChIKey         InChI                1.06  HEZRRHKWEZVWNK-ZSNZIGRDSA-N                                                                     
TY6 SMILES_CANONICAL CACTVS               3.385 "NNNC[C@@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O"                                                 
TY6 SMILES           CACTVS               3.385 "NNNC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"                                                         
TY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)NNN"                                               
TY6 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)O)NNN"                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           TY6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},3~{R},4~{S},5~{S},6~{S})-6-[(2-azanylhydrazinyl)methyl]oxane-2,3,4,5-tetrol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TY6 "Create component"         2023-05-11 PDBJ 
TY6 "Modify coordinates"       2023-05-11 PDBJ 
TY6 "Modify formula"           2023-05-11 PDBJ 
TY6 "Modify name"              2023-05-11 PDBJ 
TY6 "Modify leaving atom flag" 2023-09-21 PDBJ 
TY6 "Modify linking type"      2023-09-28 PDBJ 
TY6 "Initial release"          2023-10-04 RCSB 
# 
