data_ST7
# 
_chem_comp.id                                    ST7 
_chem_comp.name                                  "N,N-dibenzyl-N~5~-[N-(methylcarbamoyl)carbamimidoyl]-N~2~-{[5-({[(E)-(quinolin-4-ylmethylidene)amino]oxy}methyl)-1H-1,2,3-triazol-1-yl]acetyl}-L-ornithinamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C37 H41 N11 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-06-25 
_chem_comp.pdbx_modified_date                    2013-09-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        703.793 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ST7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WD1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ST7 C9  C9  C 0 1 N N N -20.320 -7.056 -31.062 12.334  2.537  0.981  C9  ST7 1  
ST7 N6  N6  N 0 1 N N N -20.884 -5.964 -30.246 10.966  2.619  0.462  N6  ST7 2  
ST7 C8  C8  C 0 1 N N N -20.268 -4.801 -30.099 10.005  1.820  0.965  C8  ST7 3  
ST7 O3  O3  O 0 1 N N N -19.170 -4.555 -30.608 10.273  1.030  1.849  O3  ST7 4  
ST7 N4  N4  N 0 1 N N N -20.851 -3.945 -29.216 8.747   1.896  0.487  N4  ST7 5  
ST7 C7  C7  C 0 1 N N N -20.489 -2.671 -28.963 7.762   1.076  1.002  C7  ST7 6  
ST7 N5  N5  N 0 1 N N N -19.312 -2.135 -29.427 8.049   0.231  1.950  N5  ST7 7  
ST7 N3  N3  N 0 1 N N N -21.247 -2.034 -28.048 6.479   1.153  0.515  N3  ST7 8  
ST7 C6  C6  C 0 1 N N N -21.075 -0.594 -27.628 5.435   0.284  1.062  C6  ST7 9  
ST7 C5  C5  C 0 1 N N N -21.787 0.205  -28.731 4.110   0.570  0.351  C5  ST7 10 
ST7 C4  C4  C 0 1 N N N -22.096 1.679  -28.420 3.049   -0.421 0.834  C4  ST7 11 
ST7 C2  C2  C 0 1 N N S -22.331 2.429  -29.686 1.760   -0.217 0.035  C2  ST7 12 
ST7 C1  C1  C 0 1 N N N -23.591 2.026  -30.447 0.763   -1.283 0.409  C1  ST7 13 
ST7 O2  O2  O 0 1 N N N -24.648 1.743  -29.881 0.109   -1.172 1.424  O2  ST7 14 
ST7 N1  N1  N 0 1 N N N -23.584 2.231  -31.732 0.598   -2.360 -0.385 N1  ST7 15 
ST7 C12 C12 C 0 1 N N N -24.901 2.166  -32.397 1.460   -2.547 -1.554 C12 ST7 16 
ST7 C13 C13 C 0 1 Y N N -24.902 1.135  -33.485 2.606   -3.456 -1.193 C13 ST7 17 
ST7 C20 C20 C 0 1 Y N N -24.961 -0.194 -33.070 2.438   -4.828 -1.231 C20 ST7 18 
ST7 C21 C21 C 0 1 Y N N -25.023 -1.132 -34.081 3.490   -5.662 -0.899 C21 ST7 19 
ST7 C22 C22 C 0 1 Y N N -24.931 -0.713 -35.421 4.709   -5.124 -0.530 C22 ST7 20 
ST7 C23 C23 C 0 1 Y N N -24.835 0.623  -35.834 4.876   -3.753 -0.493 C23 ST7 21 
ST7 C24 C24 C 0 1 Y N N -24.824 1.564  -34.828 3.827   -2.918 -0.830 C24 ST7 22 
ST7 C11 C11 C 0 1 N N N -22.381 2.590  -32.537 -0.444  -3.343 -0.078 C11 ST7 23 
ST7 C14 C14 C 0 1 Y N N -21.221 1.639  -32.434 -1.724  -2.952 -0.769 C14 ST7 24 
ST7 C15 C15 C 0 1 Y N N -21.410 0.238  -32.460 -2.631  -2.127 -0.130 C15 ST7 25 
ST7 C16 C16 C 0 1 Y N N -20.254 -0.542 -32.347 -3.805  -1.768 -0.764 C16 ST7 26 
ST7 C17 C17 C 0 1 Y N N -18.949 -0.013 -32.235 -4.073  -2.233 -2.039 C17 ST7 27 
ST7 C18 C18 C 0 1 Y N N -18.788 1.386  -32.234 -3.166  -3.057 -2.678 C18 ST7 28 
ST7 C19 C19 C 0 1 Y N N -19.927 2.184  -32.338 -1.989  -3.412 -2.045 C19 ST7 29 
ST7 N2  N2  N 0 1 N N N -22.607 3.932  -29.465 1.201   1.103  0.338  N2  ST7 30 
ST7 C3  C3  C 0 1 N N N -21.730 4.879  -29.335 0.402   1.718  -0.556 C3  ST7 31 
ST7 O1  O1  O 0 1 N N N -20.527 4.612  -29.193 0.146   1.179  -1.612 O1  ST7 32 
ST7 C10 C10 C 0 1 N N N -22.319 6.351  -29.350 -0.173  3.076  -0.243 C10 ST7 33 
ST7 N7  N7  N 0 1 Y N N -21.407 7.155  -28.546 -1.000  3.526  -1.365 N7  ST7 34 
ST7 N8  N8  N 0 1 Y N N -20.276 7.532  -28.949 -0.592  4.205  -2.379 N8  ST7 35 
ST7 N9  N9  N 0 1 Y N N -19.672 8.093  -28.037 -1.569  4.435  -3.183 N9  ST7 36 
ST7 C25 C25 C 0 1 Y N N -20.488 8.092  -26.934 -2.681  3.884  -2.681 C25 ST7 37 
ST7 C26 C26 C 0 1 Y N N -21.618 7.470  -27.272 -2.325  3.293  -1.517 C26 ST7 38 
ST7 C27 C27 C 0 1 N N N -22.858 7.149  -26.413 -3.224  2.531  -0.577 C27 ST7 39 
ST7 O4  O4  O 0 1 N N N -22.894 5.728  -26.097 -4.553  2.512  -1.100 O4  ST7 40 
ST7 N11 N11 N 0 1 N N N -21.936 5.140  -25.260 -5.482  1.817  -0.288 N11 ST7 41 
ST7 C28 C28 C 0 1 N N N -21.922 3.807  -25.078 -6.720  1.728  -0.652 C28 ST7 42 
ST7 C29 C29 C 0 1 Y N N -20.989 3.091  -24.304 -7.687  1.005  0.194  C29 ST7 43 
ST7 C30 C30 C 0 1 Y N N -20.718 3.391  -22.977 -7.309  0.479  1.506  C30 ST7 44 
ST7 C34 C34 C 0 1 Y N N -21.390 4.460  -22.369 -6.016  0.639  2.016  C34 ST7 45 
ST7 C35 C35 C 0 1 Y N N -21.108 4.707  -21.052 -5.710  0.132  3.244  C35 ST7 46 
ST7 C36 C36 C 0 1 Y N N -20.174 3.946  -20.357 -6.668  -0.543 3.996  C36 ST7 47 
ST7 C37 C37 C 0 1 Y N N -19.490 2.902  -20.950 -7.935  -0.716 3.529  C37 ST7 48 
ST7 C31 C31 C 0 1 Y N N -19.757 2.605  -22.283 -8.288  -0.207 2.267  C31 ST7 49 
ST7 N10 N10 N 0 1 Y N N -19.081 1.571  -22.875 -9.522  -0.359 1.780  N10 ST7 50 
ST7 C32 C32 C 0 1 Y N N -19.335 1.283  -24.122 -9.877  0.105  0.608  C32 ST7 51 
ST7 C33 C33 C 0 1 Y N N -20.268 2.033  -24.832 -9.000  0.798  -0.220 C33 ST7 52 
ST7 H1  H1  H 0 1 N N N -21.000 -7.920 -31.039 12.965  3.254  0.456  H1  ST7 53 
ST7 H2  H2  H 0 1 N N N -20.198 -6.713 -32.100 12.332  2.766  2.047  H2  ST7 54 
ST7 H3  H3  H 0 1 N N N -19.341 -7.349 -30.655 12.721  1.530  0.826  H3  ST7 55 
ST7 H4  H4  H 0 1 N N N -21.762 -6.107 -29.788 10.753  3.250  -0.244 H4  ST7 56 
ST7 H5  H5  H 0 1 N N N -21.631 -4.299 -28.700 8.533   2.526  -0.219 H5  ST7 57 
ST7 H6  H6  H 0 1 N N N -19.112 -1.250 -29.007 7.357   -0.345 2.312  H6  ST7 58 
ST7 H7  H7  H 0 1 N N N -21.981 -2.556 -27.613 6.266   1.783  -0.191 H7  ST7 59 
ST7 H8  H8  H 0 1 N N N -20.009 -0.326 -27.578 5.712   -0.758 0.908  H8  ST7 60 
ST7 H9  H9  H 0 1 N N N -21.545 -0.414 -26.650 5.323   0.477  2.129  H9  ST7 61 
ST7 H10 H10 H 0 1 N N N -22.741 -0.298 -28.945 3.788   1.586  0.577  H10 ST7 62 
ST7 H11 H11 H 0 1 N N N -21.149 0.179  -29.627 4.245   0.462  -0.725 H11 ST7 63 
ST7 H12 H12 H 0 1 N N N -21.244 2.125  -27.885 3.409   -1.439 0.688  H12 ST7 64 
ST7 H13 H13 H 0 1 N N N -22.996 1.737  -27.790 2.850   -0.254 1.892  H13 ST7 65 
ST7 H14 H14 H 0 1 N N N -21.459 2.320  -30.348 1.979   -0.282 -1.031 H14 ST7 66 
ST7 H15 H15 H 0 1 N N N -25.133 3.149  -32.833 0.882   -2.994 -2.364 H15 ST7 67 
ST7 H16 H16 H 0 1 N N N -25.668 1.904  -31.653 1.849   -1.581 -1.877 H16 ST7 68 
ST7 H17 H17 H 0 1 N N N -24.958 -0.472 -32.026 1.486   -5.248 -1.518 H17 ST7 69 
ST7 H18 H18 H 0 1 N N N -25.141 -2.179 -33.845 3.359   -6.733 -0.928 H18 ST7 70 
ST7 H19 H19 H 0 1 N N N -24.935 -1.475 -36.186 5.530   -5.776 -0.271 H19 ST7 71 
ST7 H20 H20 H 0 1 N N N -24.773 0.898  -36.877 5.828   -3.332 -0.204 H20 ST7 72 
ST7 H21 H21 H 0 1 N N N -24.757 2.616  -35.063 3.958   -1.847 -0.801 H21 ST7 73 
ST7 H22 H22 H 0 1 N N N -22.036 3.581  -32.206 -0.129  -4.327 -0.426 H22 ST7 74 
ST7 H23 H23 H 0 1 N N N -22.684 2.641  -33.593 -0.608  -3.375 0.999  H23 ST7 75 
ST7 H24 H24 H 0 1 N N N -22.390 -0.204 -32.561 -2.422  -1.764 0.865  H24 ST7 76 
ST7 H25 H25 H 0 1 N N N -20.366 -1.616 -32.345 -4.514  -1.124 -0.265 H25 ST7 77 
ST7 H26 H26 H 0 1 N N N -18.094 -0.667 -32.152 -4.991  -1.953 -2.534 H26 ST7 78 
ST7 H27 H27 H 0 1 N N N -17.807 1.830  -32.155 -3.375  -3.420 -3.673 H27 ST7 79 
ST7 H28 H28 H 0 1 N N N -19.812 3.258  -32.345 -1.279  -4.053 -2.547 H28 ST7 80 
ST7 H29 H29 H 0 1 N N N -23.568 4.206  -29.417 1.406   1.534  1.183  H29 ST7 81 
ST7 H30 H30 H 0 1 N N N -22.362 6.736  -30.380 -0.784  3.013  0.657  H30 ST7 82 
ST7 H31 H31 H 0 1 N N N -23.328 6.364  -28.912 0.638   3.786  -0.083 H31 ST7 83 
ST7 H32 H32 H 0 1 N N N -20.257 8.517  -25.968 -3.667  3.903  -3.122 H32 ST7 84 
ST7 H33 H33 H 0 1 N N N -22.813 7.728  -25.479 -2.859  1.509  -0.474 H33 ST7 85 
ST7 H34 H34 H 0 1 N N N -23.767 7.421  -26.970 -3.224  3.017  0.399  H34 ST7 86 
ST7 H35 H35 H 0 1 N N N -22.695 3.235  -25.569 -7.046  2.184  -1.575 H35 ST7 87 
ST7 H36 H36 H 0 1 N N N -22.100 5.063  -22.916 -5.266  1.161  1.440  H36 ST7 88 
ST7 H37 H37 H 0 1 N N N -21.621 5.509  -20.543 -4.712  0.255  3.638  H37 ST7 89 
ST7 H38 H38 H 0 1 N N N -19.977 4.178  -19.321 -6.401  -0.936 4.966  H38 ST7 90 
ST7 H39 H39 H 0 1 N N N -18.764 2.329  -20.391 -8.666  -1.242 4.125  H39 ST7 91 
ST7 H40 H40 H 0 1 N N N -18.822 0.463  -24.603 -10.891 -0.053 0.272  H40 ST7 92 
ST7 H41 H41 H 0 1 N N N -20.442 1.772  -25.866 -9.335  1.168  -1.177 H41 ST7 93 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ST7 C23 C22 DOUB Y N 1  
ST7 C23 C24 SING Y N 2  
ST7 C22 C21 SING Y N 3  
ST7 C24 C13 DOUB Y N 4  
ST7 C21 C20 DOUB Y N 5  
ST7 C13 C20 SING Y N 6  
ST7 C13 C12 SING N N 7  
ST7 C11 C14 SING N N 8  
ST7 C11 N1  SING N N 9  
ST7 C15 C14 DOUB Y N 10 
ST7 C15 C16 SING Y N 11 
ST7 C14 C19 SING Y N 12 
ST7 C12 N1  SING N N 13 
ST7 C16 C17 DOUB Y N 14 
ST7 C19 C18 DOUB Y N 15 
ST7 C17 C18 SING Y N 16 
ST7 N1  C1  SING N N 17 
ST7 C9  N6  SING N N 18 
ST7 O3  C8  DOUB N N 19 
ST7 C1  O2  DOUB N N 20 
ST7 C1  C2  SING N N 21 
ST7 N6  C8  SING N N 22 
ST7 C8  N4  SING N N 23 
ST7 C2  N2  SING N N 24 
ST7 C2  C4  SING N N 25 
ST7 N2  C3  SING N N 26 
ST7 N5  C7  DOUB N N 27 
ST7 C10 C3  SING N N 28 
ST7 C10 N7  SING N N 29 
ST7 C3  O1  DOUB N N 30 
ST7 N4  C7  SING N N 31 
ST7 C7  N3  SING N N 32 
ST7 N8  N7  SING Y N 33 
ST7 N8  N9  DOUB Y N 34 
ST7 C5  C4  SING N N 35 
ST7 C5  C6  SING N N 36 
ST7 N7  C26 SING Y N 37 
ST7 N3  C6  SING N N 38 
ST7 N9  C25 SING Y N 39 
ST7 C26 C25 DOUB Y N 40 
ST7 C26 C27 SING N N 41 
ST7 C27 O4  SING N N 42 
ST7 O4  N11 SING N N 43 
ST7 N11 C28 DOUB N E 44 
ST7 C28 C29 SING N N 45 
ST7 C33 C29 DOUB Y N 46 
ST7 C33 C32 SING Y N 47 
ST7 C29 C30 SING Y N 48 
ST7 C32 N10 DOUB Y N 49 
ST7 C30 C34 DOUB Y N 50 
ST7 C30 C31 SING Y N 51 
ST7 N10 C31 SING Y N 52 
ST7 C34 C35 SING Y N 53 
ST7 C31 C37 DOUB Y N 54 
ST7 C35 C36 DOUB Y N 55 
ST7 C37 C36 SING Y N 56 
ST7 C9  H1  SING N N 57 
ST7 C9  H2  SING N N 58 
ST7 C9  H3  SING N N 59 
ST7 N6  H4  SING N N 60 
ST7 N4  H5  SING N N 61 
ST7 N5  H6  SING N N 62 
ST7 N3  H7  SING N N 63 
ST7 C6  H8  SING N N 64 
ST7 C6  H9  SING N N 65 
ST7 C5  H10 SING N N 66 
ST7 C5  H11 SING N N 67 
ST7 C4  H12 SING N N 68 
ST7 C4  H13 SING N N 69 
ST7 C2  H14 SING N N 70 
ST7 C12 H15 SING N N 71 
ST7 C12 H16 SING N N 72 
ST7 C20 H17 SING N N 73 
ST7 C21 H18 SING N N 74 
ST7 C22 H19 SING N N 75 
ST7 C23 H20 SING N N 76 
ST7 C24 H21 SING N N 77 
ST7 C11 H22 SING N N 78 
ST7 C11 H23 SING N N 79 
ST7 C15 H24 SING N N 80 
ST7 C16 H25 SING N N 81 
ST7 C17 H26 SING N N 82 
ST7 C18 H27 SING N N 83 
ST7 C19 H28 SING N N 84 
ST7 N2  H29 SING N N 85 
ST7 C10 H30 SING N N 86 
ST7 C10 H31 SING N N 87 
ST7 C25 H32 SING N N 88 
ST7 C27 H33 SING N N 89 
ST7 C27 H34 SING N N 90 
ST7 C28 H35 SING N N 91 
ST7 C34 H36 SING N N 92 
ST7 C35 H37 SING N N 93 
ST7 C36 H38 SING N N 94 
ST7 C37 H39 SING N N 95 
ST7 C32 H40 SING N N 96 
ST7 C33 H41 SING N N 97 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ST7 SMILES           ACDLabs              12.01 "O=C(NC(C(=O)N(Cc1ccccc1)Cc2ccccc2)CCCNC(=[N@H])NC(=O)NC)Cn3nncc3CO\N=C\c4c5ccccc5ncc4" 
ST7 InChI            InChI                1.03  
;InChI=1S/C37H41N11O4/c1-39-37(51)45-36(38)41-19-10-17-33(35(50)47(23-27-11-4-2-5-12-27)24-28-13-6-3-7-14-28)44-34(49)25-48-30(22-42-46-48)26-52-43-21-29-18-20-40-32-16-9-8-15-31(29)32/h2-9,11-16,18,20-22,33H,10,17,19,23-26H2,1H3,(H,44,49)(H4,38,39,41,45,51)/b43-21+/t33-/m0/s1
;
ST7 InChIKey         InChI                1.03  YASCYEPUKAYRJI-IPZIAFNWSA-N 
ST7 SMILES_CANONICAL CACTVS               3.385 "CNC(=O)NC(=N)NCCC[C@H](NC(=O)Cn1nncc1CO\N=C\c2ccnc3ccccc23)C(=O)N(Cc4ccccc4)Cc5ccccc5" 
ST7 SMILES           CACTVS               3.385 "CNC(=O)NC(=N)NCCC[CH](NC(=O)Cn1nncc1CON=Cc2ccnc3ccccc23)C(=O)N(Cc4ccccc4)Cc5ccccc5" 
ST7 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(/NCCC[C@@H](C(=O)N(Cc1ccccc1)Cc2ccccc2)NC(=O)Cn3c(cnn3)CO/N=C/c4ccnc5c4cccc5)\NC(=O)NC" 
ST7 SMILES           "OpenEye OEToolkits" 1.7.6 "CNC(=O)NC(=N)NCCCC(C(=O)N(Cc1ccccc1)Cc2ccccc2)NC(=O)Cn3c(cnn3)CON=Cc4ccnc5c4cccc5" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ST7 "SYSTEMATIC NAME" ACDLabs              12.01 "N,N-dibenzyl-N~5~-[N-(methylcarbamoyl)carbamimidoyl]-N~2~-{[5-({[(E)-(quinolin-4-ylmethylidene)amino]oxy}methyl)-1H-1,2,3-triazol-1-yl]acetyl}-L-ornithinamide"             
ST7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-N,N-bis(phenylmethyl)-2-[2-[5-[[(E)-quinolin-4-ylmethylideneamino]oxymethyl]-1,2,3-triazol-1-yl]ethanoylamino]pentanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ST7 "Create component" 2013-06-25 PDBJ 
ST7 "Initial release"  2013-09-18 RCSB 
# 
