data_WM7
#

_chem_comp.id                                   WM7
_chem_comp.name                                 "(3S)-N-benzylpyrrolidin-3-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H16 N2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-30
_chem_comp.pdbx_modified_date                   2020-11-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       176.258
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    WM7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RX2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WM7  C10  C1   C  0  1  Y  N  N  -35.077  21.865  -3.754  -3.475   1.253  -0.560  C10  WM7   1  
WM7  C13  C2   C  0  1  Y  N  N  -34.456  22.859  -1.254  -2.442  -1.126   0.398  C13  WM7   2  
WM7  C01  C3   C  0  1  N  N  N  -36.498  21.676  -0.197  -0.288  -0.013   1.018  C01  WM7   3  
WM7  C03  C4   C  0  1  N  N  S  -38.795  21.514   0.667   2.046  -0.357   0.470  C03  WM7   4  
WM7  C04  C5   C  0  1  N  N  N  -38.730  22.402   1.904   2.933  -1.240  -0.431  C04  WM7   5  
WM7  C05  C6   C  0  1  N  N  N  -39.811  23.530   1.637   4.039  -0.298  -0.953  C05  WM7   6  
WM7  C07  C7   C  0  1  N  N  N  -40.130  21.563   0.299   2.690   1.045   0.417  C07  WM7   7  
WM7  C08  C8   C  0  1  Y  N  N  -35.562  22.046  -1.416  -1.681   0.027   0.445  C08  WM7   8  
WM7  C09  C9   C  0  1  Y  N  N  -35.860  21.551  -2.680  -2.197   1.217  -0.034  C09  WM7   9  
WM7  C11  C10  C  0  1  Y  N  N  -33.983  22.677  -3.598  -4.237   0.100  -0.607  C11  WM7  10  
WM7  C12  C11  C  0  1  Y  N  N  -33.675  23.173  -2.321  -3.720  -1.089  -0.128  C12  WM7  11  
WM7  N02  N1   N  0  1  N  N  N  -37.908  22.025  -0.425   0.674  -0.310  -0.052  N02  WM7  12  
WM7  N06  N2   N  0  1  N  N  N  -40.736  22.946   0.869   4.109   0.791   0.055  N06  WM7  13  
WM7  H1   H1   H  0  1  N  N  N  -35.320  21.472  -4.730  -3.881   2.183  -0.930  H1   WM7  14  
WM7  H2   H2   H  0  1  N  N  N  -34.212  23.246  -0.276  -2.038  -2.055   0.772  H2   WM7  15  
WM7  H3   H3   H  0  1  N  N  N  -36.430  20.593  -0.020  -0.050   0.954   1.462  H3   WM7  16  
WM7  H4   H4   H  0  1  N  N  N  -36.143  22.216   0.693  -0.231  -0.787   1.783  H4   WM7  17  
WM7  H5   H5   H  0  1  N  N  N  -38.494  20.492   0.939   2.048  -0.736   1.492  H5   WM7  18  
WM7  H6   H6   H  0  1  N  N  N  -38.981  21.828   2.808   3.370  -2.053   0.149  H6   WM7  19  
WM7  H7   H7   H  0  1  N  N  N  -37.728  22.842   2.015   2.350  -1.639  -1.261  H7   WM7  20  
WM7  H8   H8   H  0  1  N  N  N  -39.357  24.385   1.114   4.991  -0.825  -1.010  H8   WM7  21  
WM7  H9   H9   H  0  1  N  N  N  -40.254  23.873   2.584   3.767   0.102  -1.930  H9   WM7  22  
WM7  H10  H10  H  0  1  N  N  N  -40.219  21.537  -0.797   2.207   1.657  -0.344  H10  WM7  23  
WM7  H11  H11  H  0  1  N  N  N  -40.671  20.709   0.732   2.628   1.530   1.392  H11  WM7  24  
WM7  H12  H12  H  0  1  N  N  N  -36.720  20.911  -2.814  -1.602   2.117   0.002  H12  WM7  25  
WM7  H13  H13  H  0  1  N  N  N  -33.366  22.932  -4.447  -5.235   0.129  -1.017  H13  WM7  26  
WM7  H14  H14  H  0  1  N  N  N  -32.812  23.808  -2.186  -4.315  -1.990  -0.164  H14  WM7  27  
WM7  H15  H15  H  0  1  N  N  N  -37.991  23.021  -0.469   0.437  -1.171  -0.523  H15  WM7  28  
WM7  H17  H17  H  0  1  N  N  N  -40.972  23.550   0.108   4.535   1.618  -0.336  H17  WM7  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WM7  C10  C11  DOUB  Y  N   1  
WM7  C10  C09  SING  Y  N   2  
WM7  C11  C12  SING  Y  N   3  
WM7  C09  C08  DOUB  Y  N   4  
WM7  C12  C13  DOUB  Y  N   5  
WM7  C08  C13  SING  Y  N   6  
WM7  C08  C01  SING  N  N   7  
WM7  N02  C01  SING  N  N   8  
WM7  N02  C03  SING  N  N   9  
WM7  C07  C03  SING  N  N  10  
WM7  C07  N06  SING  N  N  11  
WM7  C03  C04  SING  N  N  12  
WM7  N06  C05  SING  N  N  13  
WM7  C05  C04  SING  N  N  14  
WM7  C10  H1   SING  N  N  15  
WM7  C13  H2   SING  N  N  16  
WM7  C01  H3   SING  N  N  17  
WM7  C01  H4   SING  N  N  18  
WM7  C03  H5   SING  N  N  19  
WM7  C04  H6   SING  N  N  20  
WM7  C04  H7   SING  N  N  21  
WM7  C05  H8   SING  N  N  22  
WM7  C05  H9   SING  N  N  23  
WM7  C07  H10  SING  N  N  24  
WM7  C07  H11  SING  N  N  25  
WM7  C09  H12  SING  N  N  26  
WM7  C11  H13  SING  N  N  27  
WM7  C12  H14  SING  N  N  28  
WM7  N02  H15  SING  N  N  29  
WM7  N06  H17  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WM7  SMILES            ACDLabs               12.01  "c2cccc(CNC1CCNC1)c2"  
WM7  InChI             InChI                 1.03   "InChI=1S/C11H16N2/c1-2-4-10(5-3-1)8-13-11-6-7-12-9-11/h1-5,11-13H,6-9H2/t11-/m0/s1"  
WM7  InChIKey          InChI                 1.03   NFLXIAUKMQBTMN-NSHDSACASA-N  
WM7  SMILES_CANONICAL  CACTVS                3.385  "C1C[C@@H](CN1)NCc2ccccc2"  
WM7  SMILES            CACTVS                3.385  "C1C[CH](CN1)NCc2ccccc2"  
WM7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CN[C@H]2CCNC2"  
WM7  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CNC2CCNC2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WM7  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S)-N-benzylpyrrolidin-3-amine"  
WM7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{S})-~{N}-(phenylmethyl)pyrrolidin-3-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WM7  "Create component"  2020-10-30  RCSB  
WM7  "Initial release"   2020-11-11  RCSB  
##
