data_YA7
#

_chem_comp.id                                   YA7
_chem_comp.name                                 "N-(5-(6-(2-((2S,6R)-2,6-dimethylmorpholino)pyridin-4-yl)-1-oxoisoindolin-4-yl)-2-methoxypyridin-3-yl)methanesulfonamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H29 N5 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-15
_chem_comp.pdbx_modified_date                   2022-02-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       523.604
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YA7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LQ1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YA7  C1   C1   C  0  1  N  N  N  30.873   8.779  29.342   7.580   1.019  -2.023  C1   YA7   1  
YA7  C3   C2   C  0  1  Y  N  N  32.880   9.453  30.491   5.610   0.392  -0.852  C3   YA7   2  
YA7  C5   C3   C  0  1  Y  N  N  32.886  11.364  31.832   3.769   1.750  -1.153  C5   YA7   3  
YA7  C6   C4   C  0  1  Y  N  N  34.285  11.423  31.831   2.995   0.958  -0.311  C6   YA7   4  
YA7  C7   C5   C  0  1  Y  N  N  35.079  12.466  32.527   1.576   1.304  -0.046  C7   YA7   5  
YA7  C8   C6   C  0  1  Y  N  N  36.167  12.072  33.312   0.584   0.335  -0.181  C8   YA7   6  
YA7  C11  C7   C  0  1  Y  N  N  38.034  11.342  35.581  -1.482  -1.676  -0.460  C11  YA7   7  
YA7  C12  C8   C  0  1  Y  N  N  39.153  10.912  36.273  -2.490  -2.607  -0.584  C12  YA7   8  
YA7  N13  N1   N  0  1  Y  N  N  40.301  11.569  36.194  -3.748  -2.281  -0.349  N13  YA7   9  
YA7  C16  C9   C  0  1  N  N  N  41.965  14.476  36.235  -5.891   0.350  -0.597  C16  YA7  10  
YA7  C17  C10  C  0  1  N  N  R  42.540  15.594  35.345  -7.350   0.676  -0.264  C17  YA7  11  
YA7  C19  C11  C  0  1  N  N  N  43.237  16.625  36.241  -7.852   1.782  -1.194  C19  YA7  12  
YA7  O20  O1   O  0  1  N  N  N  43.489  15.076  34.390  -8.148  -0.498  -0.443  O20  YA7  13  
YA7  C21  C12  C  0  1  N  N  S  43.033  14.002  33.554  -7.735  -1.603   0.364  C21  YA7  14  
YA7  C23  C13  C  0  1  N  N  N  44.127  13.568  32.574  -8.627  -2.811   0.072  C23  YA7  15  
YA7  C24  C14  C  0  1  N  N  N  42.673  12.817  34.460  -6.280  -1.952   0.038  C24  YA7  16  
YA7  C27  C15  C  0  1  Y  N  N  35.569  14.777  33.061  -0.095   2.927   0.594  C27  YA7  17  
YA7  O29  O2   O  0  1  N  N  N  35.474  17.160  33.139  -1.166   4.957   1.258  O29  YA7  18  
YA7  C31  C16  C  0  1  N  N  N  33.723  14.588  31.647   2.044   3.843   0.582  C31  YA7  19  
YA7  C32  C17  C  0  1  Y  N  N  34.784  13.821  32.395   1.236   2.592   0.343  C32  YA7  20  
YA7  C33  C18  C  0  1  Y  N  N  34.980  10.446  31.122   3.571  -0.170   0.282  C33  YA7  21  
YA7  C34  C19  C  0  1  Y  N  N  34.280   9.456  30.451   4.900  -0.453   0.003  C34  YA7  22  
YA7  C37  C20  C  0  1  N  N  N  37.651   8.302  30.484   4.226  -3.530  -0.848  C37  YA7  23  
YA7  O2   O3   O  0  1  N  N  N  32.187   8.484  29.835   6.909   0.121  -1.136  O2   YA7  24  
YA7  N4   N2   N  0  1  Y  N  N  32.241  10.399  31.179   5.030   1.449  -1.394  N4   YA7  25  
YA7  C9   C21  C  0  1  Y  N  N  36.952  13.007  33.989  -0.746   0.664   0.068  C9   YA7  26  
YA7  C10  C22  C  0  1  Y  N  N  38.109  12.509  34.788  -1.803  -0.369  -0.076  C10  YA7  27  
YA7  C14  C23  C  0  1  Y  N  N  40.422  12.664  35.456  -4.098  -1.056   0.012  C14  YA7  28  
YA7  N15  N3   N  0  1  N  N  N  41.647  13.304  35.397  -5.437  -0.764   0.247  N15  YA7  29  
YA7  C25  C24  C  0  1  Y  N  N  39.349  13.161  34.718  -3.141  -0.062   0.169  C25  YA7  30  
YA7  C26  C25  C  0  1  Y  N  N  36.658  14.370  33.852  -1.088   1.957   0.452  C26  YA7  31  
YA7  C28  C26  C  0  1  N  N  N  35.025  16.111  32.738  -0.150   4.351   0.978  C28  YA7  32  
YA7  N30  N4   N  0  1  N  N  N  33.972  16.006  31.918   1.085   4.881   0.978  N30  YA7  33  
YA7  N35  N5   N  0  1  N  N  N  35.024   8.505  29.756   5.522  -1.571   0.572  N35  YA7  34  
YA7  S36  S1   S  0  1  N  N  N  36.041   7.483  30.571   4.658  -2.962   0.820  S36  YA7  35  
YA7  O38  O4   O  0  1  N  N  N  35.586   7.499  31.918   3.497  -2.534   1.517  O38  YA7  36  
YA7  O39  O5   O  0  1  N  N  N  36.057   6.284  29.800   5.589  -3.850   1.423  O39  YA7  37  
YA7  H1   H1   H  0  1  N  N  N  30.460   7.890  28.842   8.609   0.688  -2.165  H1   YA7  38  
YA7  H2   H2   H  0  1  N  N  N  30.222   9.062  30.182   7.067   1.031  -2.984  H2   YA7  39  
YA7  H3   H3   H  0  1  N  N  N  30.929   9.611  28.624   7.576   2.022  -1.596  H3   YA7  40  
YA7  H4   H4   H  0  1  N  N  N  32.322  12.112  32.370   3.332   2.623  -1.615  H4   YA7  41  
YA7  H5   H5   H  0  1  N  N  N  36.405  11.022  33.396   0.845  -0.669  -0.479  H5   YA7  42  
YA7  H6   H6   H  0  1  N  N  N  37.109  10.789  35.647  -0.456  -1.952  -0.654  H6   YA7  43  
YA7  H7   H7   H  0  1  N  N  N  39.089  10.026  36.888  -2.248  -3.618  -0.876  H7   YA7  44  
YA7  H8   H8   H  0  1  N  N  N  42.707  14.193  36.996  -5.812   0.068  -1.647  H8   YA7  45  
YA7  H9   H9   H  0  1  N  N  N  41.050  14.834  36.730  -5.271   1.226  -0.408  H9   YA7  46  
YA7  H10  H10  H  0  1  N  N  N  41.709  16.087  34.819  -7.421   1.010   0.771  H10  YA7  47  
YA7  H11  H11  H  0  1  N  N  N  42.517  17.023  36.971  -7.782   1.446  -2.229  H11  YA7  48  
YA7  H12  H12  H  0  1  N  N  N  44.071  16.144  36.773  -8.890   2.013  -0.957  H12  YA7  49  
YA7  H13  H13  H  0  1  N  N  N  43.623  17.448  35.621  -7.241   2.675  -1.060  H13  YA7  50  
YA7  H14  H14  H  0  1  N  N  N  42.141  14.307  32.987  -7.817  -1.336   1.418  H14  YA7  51  
YA7  H15  H15  H  0  1  N  N  N  43.753  12.746  31.947  -8.542  -3.079  -0.982  H15  YA7  52  
YA7  H16  H16  H  0  1  N  N  N  44.405  14.419  31.935  -8.312  -3.654   0.687  H16  YA7  53  
YA7  H17  H17  H  0  1  N  N  N  45.009  13.228  33.136  -9.663  -2.561   0.301  H17  YA7  54  
YA7  H18  H18  H  0  1  N  N  N  42.275  11.986  33.859  -5.943  -2.757   0.691  H18  YA7  55  
YA7  H19  H19  H  0  1  N  N  N  43.562  12.477  35.012  -6.207  -2.271  -1.002  H19  YA7  56  
YA7  H20  H20  H  0  1  N  N  N  32.723  14.302  32.005   2.763   3.672   1.384  H20  YA7  57  
YA7  H21  H21  H  0  1  N  N  N  36.060  10.460  31.095   2.996  -0.805   0.940  H21  YA7  58  
YA7  H22  H22  H  0  1  N  N  N  38.403   7.691  31.005   5.138  -3.712  -1.418  H22  YA7  59  
YA7  H23  H23  H  0  1  N  N  N  37.944   8.424  29.431   3.649  -4.452  -0.780  H23  YA7  60  
YA7  H24  H24  H  0  1  N  N  N  37.586   9.290  30.963   3.632  -2.765  -1.349  H24  YA7  61  
YA7  H25  H25  H  0  1  N  N  N  39.471  14.038  34.099  -3.429   0.935   0.468  H25  YA7  62  
YA7  H26  H26  H  0  1  N  N  N  37.267  15.107  34.353  -2.120   2.208   0.645  H26  YA7  63  
YA7  H27  H27  H  0  1  N  N  N  34.369   7.929  29.266   6.459  -1.531   0.821  H27  YA7  64  
YA7  H28  H28  H  0  1  N  N  N  33.798  14.388  30.568   2.562   4.140  -0.329  H28  YA7  65  
YA7  H29  H29  H  0  1  N  N  N  33.442  16.770  31.551   1.306   5.800   1.199  H29  YA7  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YA7  C1   O2   SING  N  N   1  
YA7  N35  C34  SING  N  N   2  
YA7  N35  S36  SING  N  N   3  
YA7  O39  S36  DOUB  N  N   4  
YA7  O2   C3   SING  N  N   5  
YA7  C34  C3   DOUB  Y  N   6  
YA7  C34  C33  SING  Y  N   7  
YA7  C37  S36  SING  N  N   8  
YA7  C3   N4   SING  Y  N   9  
YA7  S36  O38  DOUB  N  N  10  
YA7  C33  C6   DOUB  Y  N  11  
YA7  N4   C5   DOUB  Y  N  12  
YA7  C31  N30  SING  N  N  13  
YA7  C31  C32  SING  N  N  14  
YA7  C6   C5   SING  Y  N  15  
YA7  C6   C7   SING  N  N  16  
YA7  N30  C28  SING  N  N  17  
YA7  C32  C7   DOUB  Y  N  18  
YA7  C32  C27  SING  Y  N  19  
YA7  C7   C8   SING  Y  N  20  
YA7  C23  C21  SING  N  N  21  
YA7  C28  C27  SING  N  N  22  
YA7  C28  O29  DOUB  N  N  23  
YA7  C27  C26  DOUB  Y  N  24  
YA7  C8   C9   DOUB  Y  N  25  
YA7  C21  O20  SING  N  N  26  
YA7  C21  C24  SING  N  N  27  
YA7  C26  C9   SING  Y  N  28  
YA7  C9   C10  SING  N  N  29  
YA7  O20  C17  SING  N  N  30  
YA7  C24  N15  SING  N  N  31  
YA7  C25  C10  DOUB  Y  N  32  
YA7  C25  C14  SING  Y  N  33  
YA7  C10  C11  SING  Y  N  34  
YA7  C17  C16  SING  N  N  35  
YA7  C17  C19  SING  N  N  36  
YA7  N15  C14  SING  N  N  37  
YA7  N15  C16  SING  N  N  38  
YA7  C14  N13  DOUB  Y  N  39  
YA7  C11  C12  DOUB  Y  N  40  
YA7  N13  C12  SING  Y  N  41  
YA7  C1   H1   SING  N  N  42  
YA7  C1   H2   SING  N  N  43  
YA7  C1   H3   SING  N  N  44  
YA7  C5   H4   SING  N  N  45  
YA7  C8   H5   SING  N  N  46  
YA7  C11  H6   SING  N  N  47  
YA7  C12  H7   SING  N  N  48  
YA7  C16  H8   SING  N  N  49  
YA7  C16  H9   SING  N  N  50  
YA7  C17  H10  SING  N  N  51  
YA7  C19  H11  SING  N  N  52  
YA7  C19  H12  SING  N  N  53  
YA7  C19  H13  SING  N  N  54  
YA7  C21  H14  SING  N  N  55  
YA7  C23  H15  SING  N  N  56  
YA7  C23  H16  SING  N  N  57  
YA7  C23  H17  SING  N  N  58  
YA7  C24  H18  SING  N  N  59  
YA7  C24  H19  SING  N  N  60  
YA7  C31  H20  SING  N  N  61  
YA7  C33  H21  SING  N  N  62  
YA7  C37  H22  SING  N  N  63  
YA7  C37  H23  SING  N  N  64  
YA7  C37  H24  SING  N  N  65  
YA7  C25  H25  SING  N  N  66  
YA7  C26  H26  SING  N  N  67  
YA7  N35  H27  SING  N  N  68  
YA7  C31  H28  SING  N  N  69  
YA7  N30  H29  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YA7  InChI             InChI                 1.03   "InChI=1S/C26H29N5O5S/c1-15-13-31(14-16(2)36-15)24-10-17(5-6-27-24)18-7-20(22-12-28-25(32)21(22)8-18)19-9-23(30-37(4,33)34)26(35-3)29-11-19/h5-11,15-16,30H,12-14H2,1-4H3,(H,28,32)/t15-,16+"  
YA7  InChIKey          InChI                 1.03   BTLBFTXHIOZUGF-IYBDPMFKSA-N  
YA7  SMILES_CANONICAL  CACTVS                3.385  "COc1ncc(cc1N[S](C)(=O)=O)c2cc(cc3C(=O)NCc23)c4ccnc(c4)N5C[C@@H](C)O[C@@H](C)C5"  
YA7  SMILES            CACTVS                3.385  "COc1ncc(cc1N[S](C)(=O)=O)c2cc(cc3C(=O)NCc23)c4ccnc(c4)N5C[CH](C)O[CH](C)C5"  
YA7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1CN(C[C@@H](O1)C)c2cc(ccn2)c3cc(c4c(c3)C(=O)NC4)c5cc(c(nc5)OC)NS(=O)(=O)C"  
YA7  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CN(CC(O1)C)c2cc(ccn2)c3cc(c4c(c3)C(=O)NC4)c5cc(c(nc5)OC)NS(=O)(=O)C"  
#
_pdbx_chem_comp_identifier.comp_id          YA7
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[5-[6-[2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyridin-4-yl]-1-oxidanylidene-2,3-dihydroisoindol-4-yl]-2-methoxy-pyridin-3-yl]methanesulfonamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YA7  "Create component"  2021-02-15  RCSB  
YA7  "Modify name"       2021-02-16  RCSB  
YA7  "Initial release"   2022-02-16  RCSB  
##
