data_ML8
# 
_chem_comp.id                                    ML8 
_chem_comp.name                                  "8-cyclopentyl-6-[3-(hydroxymethyl)phenyl]-4-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H24 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-04-19 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        364.441 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ML8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ML8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ML8 C24  C24  C 0 1 Y N N 40.238 13.791 32.447 -4.359 -0.260 1.891  C24  ML8 1  
ML8 C25  C25  C 0 1 Y N N 41.566 14.184 32.143 -2.991 -0.279 1.711  C25  ML8 2  
ML8 C23  C23  C 0 1 Y N N 39.627 12.733 31.747 -5.175 0.337  0.948  C23  ML8 3  
ML8 C21  C21  C 0 1 Y N N 41.666 12.448 30.433 -3.260 0.916  -0.367 C21  ML8 4  
ML8 C14  C14  C 0 1 Y N N 42.330 13.526 31.123 -2.432 0.311  0.578  C14  ML8 5  
ML8 C1   C1   C 0 1 Y N N 45.886 13.461 29.570 1.144  1.430  0.199  C1   ML8 6  
ML8 C22  C22  C 0 1 Y N N 40.335 12.058 30.741 -4.626 0.924  -0.178 C22  ML8 7  
ML8 C6   C6   C 0 1 Y N N 46.652 12.654 28.713 1.912  2.604  0.191  C6   ML8 8  
ML8 C2   C2   C 0 1 Y N N 46.525 14.609 30.058 1.797  0.193  0.006  C2   ML8 9  
ML8 C4   C4   C 0 1 Y N N 48.504 14.089 28.887 3.798  1.322  -0.164 C4   ML8 10 
ML8 C9   C9   C 0 1 N N N 44.509 13.168 29.957 -0.257 1.472  0.388  C9   ML8 11 
ML8 C10  C10  C 0 1 N N N 43.771 13.947 30.786 -0.963 0.300  0.382  C10  ML8 12 
ML8 C11  C11  C 0 1 N N N 44.453 15.223 31.338 -0.254 -0.966 0.180  C11  ML8 13 
ML8 C16  C16  C 0 1 N N N 45.637 18.706 32.529 1.789  -4.603 0.448  C16  ML8 14 
ML8 C17  C17  C 0 1 N N N 46.759 18.117 33.385 1.508  -4.517 -1.062 C17  ML8 15 
ML8 C15  C15  C 0 1 N N N 45.805 18.045 31.163 1.571  -3.186 1.018  C15  ML8 16 
ML8 C18  C18  C 0 1 N N N 46.816 16.658 32.951 1.128  -3.051 -1.357 C18  ML8 17 
ML8 C8   C8   C 0 1 N N N 46.561 16.713 31.428 1.775  -2.251 -0.199 C8   ML8 18 
ML8 C13  C13  C 0 1 N N N 46.119 11.402 28.097 1.263  3.950  0.386  C13  ML8 19 
ML8 C19  C19  C 0 1 N N N 50.642 15.180 29.437 5.947  2.514  -0.348 C19  ML8 20 
ML8 C26  C26  C 0 1 N N N 39.698 10.943 29.996 -5.523 1.577  -1.199 C26  ML8 21 
ML8 N5   N5   N 0 1 Y N N 47.948 12.957 28.374 3.216  2.504  0.009  N5   ML8 22 
ML8 N3   N3   N 0 1 Y N N 47.809 14.912 29.719 3.114  0.188  -0.169 N3   ML8 23 
ML8 N7   N7   N 0 1 N N N 45.806 15.489 30.941 1.081  -0.977 0.002  N7   ML8 24 
ML8 N20  N20  N 0 1 N N N 49.840 14.384 28.516 5.165  1.275  -0.350 N20  ML8 25 
ML8 O12  O12  O 0 1 N N N 43.832 15.973 32.096 -0.875 -2.014 0.173  O12  ML8 26 
ML8 O27  O27  O 0 1 N N N 38.947 11.488 28.915 -5.904 0.614  -2.184 O27  ML8 27 
ML8 H24  H24  H 0 1 N N N 39.691 14.307 33.222 -4.793 -0.717 2.768  H24  ML8 28 
ML8 H25  H25  H 0 1 N N N 42.013 14.999 32.693 -2.354 -0.749 2.447  H25  ML8 29 
ML8 H23  H23  H 0 1 N N N 38.615 12.441 31.984 -6.246 0.345  1.091  H23  ML8 30 
ML8 H21  H21  H 0 1 N N N 42.198 11.919 29.656 -2.832 1.375  -1.246 H21  ML8 31 
ML8 H9   H9   H 0 1 N N N 44.050 12.276 29.558 -0.761 2.416  0.536  H9   ML8 32 
ML8 H16  H16  H 0 1 N N N 44.650 18.480 32.960 1.099  -5.304 0.917  H16  ML8 33 
ML8 H16A H16A H 0 0 N N N 45.729 19.800 32.454 2.818  -4.920 0.619  H16A ML8 34 
ML8 H17  H17  H 0 1 N N N 47.715 18.629 33.202 2.400  -4.792 -1.624 H17  ML8 35 
ML8 H17A H17A H 0 0 N N N 46.536 18.209 34.458 0.682  -5.178 -1.326 H17A ML8 36 
ML8 H15  H15  H 0 1 N N N 44.826 17.851 30.701 0.559  -3.085 1.412  H15  ML8 37 
ML8 H15A H15A H 0 0 N N N 46.382 18.692 30.486 2.306  -2.969 1.793  H15A ML8 38 
ML8 H18  H18  H 0 1 N N N 47.795 16.210 33.178 1.541  -2.736 -2.316 H18  ML8 39 
ML8 H18A H18A H 0 0 N N N 46.051 16.057 33.464 0.045  -2.928 -1.350 H18A ML8 40 
ML8 H8   H8   H 0 1 N N N 47.502 16.695 30.859 2.836  -2.089 -0.388 H8   ML8 41 
ML8 H13  H13  H 0 1 N N N 46.895 10.944 27.466 1.242  4.192  1.448  H13  ML8 42 
ML8 H13A H13A H 0 0 N N N 45.829 10.698 28.891 1.833  4.709  -0.149 H13A ML8 43 
ML8 H13B H13B H 0 0 N N N 45.240 11.642 27.481 0.244  3.921  -0.001 H13B ML8 44 
ML8 H19  H19  H 0 1 N N N 51.648 15.326 29.016 5.830  3.017  0.612  H19  ML8 45 
ML8 H19A H19A H 0 0 N N N 50.163 16.159 29.589 7.000  2.279  -0.508 H19A ML8 46 
ML8 H26  H26  H 0 1 N N N 40.472 10.266 29.606 -6.414 1.964  -0.705 H26  ML8 47 
ML8 H26A H26A H 0 0 N N N 39.031 10.381 30.666 -4.989 2.397  -1.679 H26A ML8 48 
ML8 HO27 HO27 H 0 0 N N N 38.534 10.784 28.429 -6.483 0.966  -2.874 HO27 ML8 49 
ML8 H231 H231 H 0 0 N N N 50.720 14.657 30.401 5.595  3.167  -1.146 H231 ML8 50 
ML8 H241 H241 H 0 0 N N N 50.310 13.508 28.407 5.607  0.422  -0.482 H241 ML8 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ML8 C24 H24  SING N N 1  
ML8 C25 C24  SING Y N 2  
ML8 C25 H25  SING N N 3  
ML8 C23 C24  DOUB Y N 4  
ML8 C23 H23  SING N N 5  
ML8 C21 C22  DOUB Y N 6  
ML8 C21 C14  SING Y N 7  
ML8 C21 H21  SING N N 8  
ML8 C14 C25  DOUB Y N 9  
ML8 C1  C9   SING N N 10 
ML8 C1  C2   SING Y N 11 
ML8 C22 C23  SING Y N 12 
ML8 C6  C1   DOUB Y N 13 
ML8 C2  N7   SING N N 14 
ML8 C4  N3   SING Y N 15 
ML8 C9  C10  DOUB N N 16 
ML8 C9  H9   SING N N 17 
ML8 C10 C14  SING N N 18 
ML8 C10 C11  SING N N 19 
ML8 C11 O12  DOUB N N 20 
ML8 C16 C17  SING N N 21 
ML8 C16 H16  SING N N 22 
ML8 C16 H16A SING N N 23 
ML8 C17 H17  SING N N 24 
ML8 C17 H17A SING N N 25 
ML8 C15 C16  SING N N 26 
ML8 C15 C8   SING N N 27 
ML8 C15 H15  SING N N 28 
ML8 C15 H15A SING N N 29 
ML8 C18 C17  SING N N 30 
ML8 C18 H18  SING N N 31 
ML8 C18 H18A SING N N 32 
ML8 C8  C18  SING N N 33 
ML8 C8  H8   SING N N 34 
ML8 C13 C6   SING N N 35 
ML8 C13 H13  SING N N 36 
ML8 C13 H13A SING N N 37 
ML8 C13 H13B SING N N 38 
ML8 C19 H19  SING N N 39 
ML8 C19 H19A SING N N 40 
ML8 C26 C22  SING N N 41 
ML8 C26 H26  SING N N 42 
ML8 C26 H26A SING N N 43 
ML8 N5  C6   SING Y N 44 
ML8 N5  C4   DOUB Y N 45 
ML8 N3  C2   DOUB Y N 46 
ML8 N7  C11  SING N N 47 
ML8 N7  C8   SING N N 48 
ML8 N20 C4   SING N N 49 
ML8 N20 C19  SING N N 50 
ML8 O27 C26  SING N N 51 
ML8 O27 HO27 SING N N 52 
ML8 C19 H231 SING N N 53 
ML8 N20 H241 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ML8 SMILES           ACDLabs              12.01 "O=C2C(=Cc1c(nc(nc1C)NC)N2C3CCCC3)c4cccc(c4)CO"                                                                                                              
ML8 SMILES_CANONICAL CACTVS               3.370 "CNc1nc(C)c2C=C(C(=O)N(C3CCCC3)c2n1)c4cccc(CO)c4"                                                                                                            
ML8 SMILES           CACTVS               3.370 "CNc1nc(C)c2C=C(C(=O)N(C3CCCC3)c2n1)c4cccc(CO)c4"                                                                                                            
ML8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1c2c(nc(n1)NC)N(C(=O)C(=C2)c3cccc(c3)CO)C4CCCC4"                                                                                                          
ML8 SMILES           "OpenEye OEToolkits" 1.7.0 "Cc1c2c(nc(n1)NC)N(C(=O)C(=C2)c3cccc(c3)CO)C4CCCC4"                                                                                                          
ML8 InChI            InChI                1.03  "InChI=1S/C21H24N4O2/c1-13-17-11-18(15-7-5-6-14(10-15)12-26)20(27)25(16-8-3-4-9-16)19(17)24-21(22-2)23-13/h5-7,10-11,16,26H,3-4,8-9,12H2,1-2H3,(H,22,23,24)" 
ML8 InChIKey         InChI                1.03  LASGWNJRSNLLFV-UHFFFAOYSA-N                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ML8 "SYSTEMATIC NAME" ACDLabs              12.01 "8-cyclopentyl-6-[3-(hydroxymethyl)phenyl]-4-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
ML8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "8-cyclopentyl-6-[3-(hydroxymethyl)phenyl]-4-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one"     
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ML8 "Create component"     2010-04-19 RCSB 
ML8 "Modify aromatic_flag" 2011-06-04 RCSB 
ML8 "Modify descriptor"    2011-06-04 RCSB 
# 
