data_5P9
#

_chem_comp.id                                   5P9
_chem_comp.name                                 "N-(5-chloropyridin-2-yl)-3-oxo-2,3-dihydro-1H-indene-1-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H11 Cl N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(1~{R})-~{N}-(5-chloranylpyridin-2-yl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-07-14
_chem_comp.pdbx_modified_date                   2021-10-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       286.713
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5P9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7P51
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5P9  O1   O1   O   0  1  N  N  N   7.015   1.121  16.682   4.139  -2.289   1.296  O1   5P9   1  
5P9  C6   C1   C   0  1  Y  N  N  10.921  -2.216  22.585  -2.994  -1.476  -0.765  C6   5P9   2  
5P9  N1   N1   N   0  1  N  N  N   9.287  -0.901  21.455  -0.617  -1.095  -0.733  N1   5P9   3  
5P9  C7   C2   C   0  1  Y  N  N  12.177  -2.394  23.078  -4.273  -1.047  -0.454  C7   5P9   4  
5P9  N2   N2   N   0  1  Y  N  N  11.425   0.020  21.890  -2.095   0.489   0.179  N2   5P9   5  
5P9  C8   C3   C   0  1  Y  N  N  13.062  -1.342  23.017  -4.424   0.177   0.185  C8   5P9   6  
5P9  C9   C4   C   0  1  Y  N  N  12.658  -0.148  22.434  -3.302   0.925   0.488  C9   5P9   7  
5P9  C1   C5   C   0  1  N  N  N   6.990   0.717  17.824   3.487  -1.563   0.577  C1   5P9   8  
5P9  C4   C6   C   0  1  N  N  N   8.808   0.024  20.607   0.430  -0.279  -0.499  C4   5P9   9  
5P9  C5   C7   C   0  1  Y  N  N  10.593  -1.033  21.940  -1.911  -0.674  -0.425  C5   5P9  10  
5P9  C3   C8   C   0  1  N  N  R   7.525  -0.401  19.891   1.814  -0.686  -0.936  C3   5P9  11  
5P9  C2   C9   C   0  1  N  N  N   7.778  -0.428  18.363   2.249  -1.955  -0.192  C2   5P9  12  
5P9  O2   O2   O   0  1  N  N  N   9.329   1.115  20.436   0.259   0.782   0.062  O2   5P9  13  
5P9  CL1  CL1  CL  0  0  N  N  N  14.639  -1.577  23.718  -6.005   0.763   0.597  CL1  5P9  14  
5P9  C10  C10  C   0  1  Y  N  N   6.419   0.614  20.102   2.811   0.386  -0.566  C10  5P9  15  
5P9  C11  C11  C   0  1  Y  N  N   5.710   0.939  21.253   2.889   1.711  -0.951  C11  5P9  16  
5P9  C12  C12  C   0  1  Y  N  N   4.735   1.925  21.175   3.907   2.518  -0.476  C12  5P9  17  
5P9  C13  C13  C   0  1  Y  N  N   4.443   2.532  19.960   4.856   2.003   0.391  C13  5P9  18  
5P9  C14  C14  C   0  1  Y  N  N   5.143   2.214  18.810   4.789   0.686   0.786  C14  5P9  19  
5P9  C15  C15  C   0  1  Y  N  N   6.125   1.237  18.893   3.762  -0.142   0.307  C15  5P9  20  
5P9  H5   H1   H   0  1  N  N  N  10.181  -2.995  22.696  -2.841  -2.423  -1.261  H5   5P9  21  
5P9  H4   H2   H   0  1  N  N  N   8.628  -1.580  21.780  -0.471  -1.974  -1.115  H4   5P9  22  
5P9  H6   H3   H   0  1  N  N  N  12.473  -3.340  23.508  -5.133  -1.650  -0.702  H6   5P9  23  
5P9  H7   H4   H   0  1  N  N  N  13.352   0.680  22.412  -3.414   1.879   0.980  H7   5P9  24  
5P9  H3   H5   H   0  1  N  N  N   7.206  -1.395  20.238   1.831  -0.857  -2.013  H3   5P9  25  
5P9  H2   H6   H   0  1  N  N  N   7.429  -1.377  17.929   2.482  -2.748  -0.903  H2   5P9  26  
5P9  H1   H7   H   0  1  N  N  N   8.848  -0.298  18.145   1.466  -2.279   0.493  H1   5P9  27  
5P9  H8   H8   H   0  1  N  N  N   5.913   0.436  22.187   2.151   2.118  -1.627  H8   5P9  28  
5P9  H9   H9   H   0  1  N  N  N   4.200   2.222  22.065   3.961   3.552  -0.782  H9   5P9  29  
5P9  H10  H10  H   0  1  N  N  N   3.653   3.267  19.912   5.648   2.637   0.759  H10  5P9  30  
5P9  H11  H11  H   0  1  N  N  N   4.931   2.711  17.875   5.531   0.288   1.463  H11  5P9  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5P9  O1   C1   DOUB  N  N   1  
5P9  C1   C2   SING  N  N   2  
5P9  C1   C15  SING  N  N   3  
5P9  C2   C3   SING  N  N   4  
5P9  C14  C15  DOUB  Y  N   5  
5P9  C14  C13  SING  Y  N   6  
5P9  C15  C10  SING  Y  N   7  
5P9  C3   C10  SING  N  N   8  
5P9  C3   C4   SING  N  N   9  
5P9  C13  C12  DOUB  Y  N  10  
5P9  C10  C11  DOUB  Y  N  11  
5P9  O2   C4   DOUB  N  N  12  
5P9  C4   N1   SING  N  N  13  
5P9  C12  C11  SING  Y  N  14  
5P9  N1   C5   SING  N  N  15  
5P9  N2   C5   DOUB  Y  N  16  
5P9  N2   C9   SING  Y  N  17  
5P9  C5   C6   SING  Y  N  18  
5P9  C9   C8   DOUB  Y  N  19  
5P9  C6   C7   DOUB  Y  N  20  
5P9  C8   C7   SING  Y  N  21  
5P9  C8   CL1  SING  N  N  22  
5P9  C6   H5   SING  N  N  23  
5P9  N1   H4   SING  N  N  24  
5P9  C7   H6   SING  N  N  25  
5P9  C9   H7   SING  N  N  26  
5P9  C3   H3   SING  N  N  27  
5P9  C2   H2   SING  N  N  28  
5P9  C2   H1   SING  N  N  29  
5P9  C11  H8   SING  N  N  30  
5P9  C12  H9   SING  N  N  31  
5P9  C13  H10  SING  N  N  32  
5P9  C14  H11  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5P9  InChI             InChI                 1.03   "InChI=1S/C15H11ClN2O2/c16-9-5-6-14(17-8-9)18-15(20)12-7-13(19)11-4-2-1-3-10(11)12/h1-6,8,12H,7H2,(H,17,18,20)/t12-/m1/s1"  
5P9  InChIKey          InChI                 1.03   SHUGQXDCDVWNCL-GFCCVEGCSA-N  
5P9  SMILES_CANONICAL  CACTVS                3.385  "Clc1ccc(NC(=O)[C@@H]2CC(=O)c3ccccc23)nc1"  
5P9  SMILES            CACTVS                3.385  "Clc1ccc(NC(=O)[CH]2CC(=O)c3ccccc23)nc1"  
5P9  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)[C@@H](CC2=O)C(=O)Nc3ccc(cn3)Cl"  
5P9  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)C(CC2=O)C(=O)Nc3ccc(cn3)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          5P9
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(1~{R})-~{N}-(5-chloranylpyridin-2-yl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5P9
_pdbx_chem_comp_synonyms.name        "(1~{R})-~{N}-(5-chloranylpyridin-2-yl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5P9  "Create component"  2021-07-14  PDBE  
5P9  "Initial release"   2021-10-06  RCSB  
##
