data_PR9
# 
_chem_comp.id                                    PR9 
_chem_comp.name                                  D-PROLINAMIDE 
_chem_comp.type                                  "D-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H10 N2 O" 
_chem_comp.mon_nstd_parent_comp_id               PRO 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        114.146 
_chem_comp.one_letter_code                       P 
_chem_comp.three_letter_code                     PR9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2WRW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PR9 O    O    O 0 1 N N N N N N -15.413 8.415 13.032 1.533  -1.054 -0.752 O    PR9 1  
PR9 C    C    C 0 1 N N N N N N -15.165 7.444 13.753 1.386  -0.113 -0.002 C    PR9 2  
PR9 CA   CA   C 0 1 N N R N N N -14.318 7.645 15.012 0.036  0.159  0.610  CA   PR9 3  
PR9 NXT  NXT  N 0 1 N N N N N N -15.657 6.239 13.404 2.431  0.687  0.288  NXT  PR9 4  
PR9 N    N    N 0 1 N N N N N N -13.541 6.449 15.418 -0.816 -1.046 0.506  N    PR9 5  
PR9 CD   CD   C 0 1 N N N N N N -14.330 5.564 16.299 -2.197 -0.546 0.279  CD   PR9 6  
PR9 CG   CG   C 0 1 N N N N N N -15.362 6.531 16.897 -1.987 0.651  -0.681 CG   PR9 7  
PR9 CB   CB   C 0 1 N N N N N N -15.223 7.909 16.220 -0.675 1.284  -0.164 CB   PR9 8  
PR9 H    H    H 0 1 N N N N N N -13.282 5.939 14.598 -0.516 -1.636 -0.255 H    PR9 9  
PR9 HA   HA   H 0 1 N N N N N N -13.645 8.476 14.752 0.154  0.445  1.656  HA   PR9 10 
PR9 HD1C HD1C H 0 0 N N N N N N -14.809 4.748 15.738 -2.811 -1.314 -0.191 HD1C PR9 11 
PR9 HD2C HD2C H 0 0 N N N N N N -13.723 5.049 17.058 -2.645 -0.217 1.217  HD2C PR9 12 
PR9 HB1C HB1C H 0 0 N N N N N N -14.773 8.645 16.902 -0.894 2.120  0.499  HB1C PR9 13 
PR9 HB2C HB2C H 0 0 N N N N N N -16.196 8.333 15.930 -0.059 1.615  -1.001 HB2C PR9 14 
PR9 HG1C HG1C H 0 0 N N N N N N -15.186 6.633 17.978 -1.870 0.306  -1.709 HG1C PR9 15 
PR9 HG2C HG2C H 0 0 N N N N N N -16.375 6.138 16.728 -2.815 1.356  -0.605 HG2C PR9 16 
PR9 HXT1 HXT1 H 0 0 N N N N N N -15.375 5.559 14.081 3.301  0.510  -0.103 HXT1 PR9 17 
PR9 HXT2 HXT2 H 0 0 N N N N N N -16.216 6.054 12.596 2.313  1.440  0.889  HXT2 PR9 18 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PR9 N   CA   SING N N 1  
PR9 N   CD   SING N N 2  
PR9 CA  CB   SING N N 3  
PR9 CA  C    SING N N 4  
PR9 CB  CG   SING N N 5  
PR9 CG  CD   SING N N 6  
PR9 C   O    DOUB N N 7  
PR9 C   NXT  SING N N 8  
PR9 N   H    SING N N 9  
PR9 CA  HA   SING N N 10 
PR9 CD  HD1C SING N N 11 
PR9 CD  HD2C SING N N 12 
PR9 CB  HB1C SING N N 13 
PR9 CB  HB2C SING N N 14 
PR9 CG  HG1C SING N N 15 
PR9 CG  HG2C SING N N 16 
PR9 NXT HXT1 SING N N 17 
PR9 NXT HXT2 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PR9 SMILES           ACDLabs              10.04 "O=C(N)C1NCCC1"                                                       
PR9 SMILES_CANONICAL CACTVS               3.352 "NC(=O)[C@H]1CCCN1"                                                   
PR9 SMILES           CACTVS               3.352 "NC(=O)[CH]1CCCN1"                                                    
PR9 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C1C[C@@H](NC1)C(=O)N"                                                
PR9 SMILES           "OpenEye OEToolkits" 1.6.1 "C1CC(NC1)C(=O)N"                                                     
PR9 InChI            InChI                1.03  "InChI=1S/C5H10N2O/c6-5(8)4-2-1-3-7-4/h4,7H,1-3H2,(H2,6,8)/t4-/m1/s1" 
PR9 InChIKey         InChI                1.03  VLJNHYLEOZPXFW-SCSAIBSYSA-N                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PR9 "SYSTEMATIC NAME" ACDLabs              10.04 D-prolinamide                    
PR9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R)-pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PR9 "Create component"  2009-09-02 EBI  
PR9 "Modify descriptor" 2011-06-04 RCSB 
PR9 "Modify PCM"        2024-09-27 PDBE 
# 
