data_SS9
# 
_chem_comp.id                                    SS9 
_chem_comp.name                                  "5-[(3-aminopropyl)amino]pentane-1-thiol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H20 N2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-05-18 
_chem_comp.pdbx_modified_date                    2015-07-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        176.323 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SS9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4ZUN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SS9 C2  C1  C 0 1 N N N -10.452 0.836  -28.185 -5.604 -0.391 0.005  C2  SS9 1  
SS9 C3  C2  C 0 1 N N N -10.422 1.767  -26.984 -4.320 0.440  0.036  C3  SS9 2  
SS9 C4  C3  C 0 1 N N N -11.355 2.958  -27.193 -3.108 -0.493 -0.005 C4  SS9 3  
SS9 C6  C4  C 0 1 N N N -11.928 5.139  -26.018 -0.688 -0.559 -0.013 C6  SS9 4  
SS9 C7  C5  C 0 1 N N N -11.742 5.895  -27.338 0.574  0.306  0.020  C7  SS9 5  
SS9 C8  C6  C 0 1 N N N -12.421 7.263  -27.201 1.811  -0.594 -0.019 C8  SS9 6  
SS9 C9  C7  C 0 1 N N N -12.191 8.218  -28.375 3.072  0.271  0.014  C9  SS9 7  
SS9 C10 C8  C 0 1 N N N -13.173 9.394  -28.297 4.309  -0.630 -0.026 C10 SS9 8  
SS9 N1  N1  N 0 1 N N N -9.643  -0.321 -27.845 -6.768 0.505  0.044  N1  SS9 9  
SS9 N5  N2  N 0 1 N N N -11.425 3.772  -25.994 -1.875 0.305  0.025  N5  SS9 10 
SS9 S11 S1  S 0 1 N N N -13.146 10.489 -29.740 5.805  0.396  0.013  S11 SS9 11 
SS9 H1  H1  H 0 1 N N N -10.034 1.343  -29.067 -5.632 -0.982 -0.910 H1  SS9 12 
SS9 H2  H2  H 0 1 N N N -11.486 0.525  -28.396 -5.628 -1.056 0.868  H2  SS9 13 
SS9 H3  H3  H 0 1 N N N -10.742 1.212  -26.090 -4.296 1.105  -0.827 H3  SS9 14 
SS9 H4  H4  H 0 1 N N N -9.396  2.135  -26.839 -4.292 1.032  0.951  H4  SS9 15 
SS9 H5  H5  H 0 1 N N N -10.977 3.571  -28.024 -3.132 -1.157 0.859  H5  SS9 16 
SS9 H6  H6  H 0 1 N N N -12.362 2.589  -27.438 -3.135 -1.084 -0.920 H6  SS9 17 
SS9 H7  H7  H 0 1 N N N -11.409 5.704  -25.230 -0.698 -1.151 -0.928 H7  SS9 18 
SS9 H8  H8  H 0 1 N N N -13.005 5.106  -25.797 -0.695 -1.224 0.851  H8  SS9 19 
SS9 H9  H9  H 0 1 N N N -12.205 5.329  -28.160 0.581  0.971  -0.843 H9  SS9 20 
SS9 H10 H10 H 0 1 N N N -10.670 6.029  -27.543 0.585  0.898  0.936  H10 SS9 21 
SS9 H11 H11 H 0 1 N N N -12.038 7.744  -26.289 1.804  -1.260 0.844  H11 SS9 22 
SS9 H12 H12 H 0 1 N N N -13.504 7.098  -27.102 1.800  -1.186 -0.934 H12 SS9 23 
SS9 H13 H13 H 0 1 N N N -12.346 7.677  -29.320 3.079  0.936  -0.850 H13 SS9 24 
SS9 H14 H14 H 0 1 N N N -11.161 8.601  -28.336 3.083  0.863  0.929  H14 SS9 25 
SS9 H15 H15 H 0 1 N N N -12.924 9.991  -27.407 4.302  -1.295 0.837  H15 SS9 26 
SS9 H16 H16 H 0 1 N N N -14.190 8.987  -28.193 4.298  -1.222 -0.941 H16 SS9 27 
SS9 H17 H17 H 0 1 N N N -9.637  -0.961 -28.613 -6.735 1.174  -0.710 H17 SS9 28 
SS9 H18 H18 H 0 1 N N N -8.708  -0.027 -27.648 -7.629 -0.020 0.024  H18 SS9 29 
SS9 H20 H20 H 0 1 N N N -12.003 3.272  -25.349 -1.859 0.975  -0.729 H20 SS9 30 
SS9 H22 H22 H 0 1 N N N -14.044 11.374 -29.425 6.796  -0.513 -0.027 H22 SS9 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SS9 S11 C10 SING N N 1  
SS9 C9  C10 SING N N 2  
SS9 C9  C8  SING N N 3  
SS9 C2  N1  SING N N 4  
SS9 C2  C3  SING N N 5  
SS9 C7  C8  SING N N 6  
SS9 C7  C6  SING N N 7  
SS9 C4  C3  SING N N 8  
SS9 C4  N5  SING N N 9  
SS9 C6  N5  SING N N 10 
SS9 C2  H1  SING N N 11 
SS9 C2  H2  SING N N 12 
SS9 C3  H3  SING N N 13 
SS9 C3  H4  SING N N 14 
SS9 C4  H5  SING N N 15 
SS9 C4  H6  SING N N 16 
SS9 C6  H7  SING N N 17 
SS9 C6  H8  SING N N 18 
SS9 C7  H9  SING N N 19 
SS9 C7  H10 SING N N 20 
SS9 C8  H11 SING N N 21 
SS9 C8  H12 SING N N 22 
SS9 C9  H13 SING N N 23 
SS9 C9  H14 SING N N 24 
SS9 C10 H15 SING N N 25 
SS9 C10 H16 SING N N 26 
SS9 N1  H17 SING N N 27 
SS9 N1  H18 SING N N 28 
SS9 N5  H20 SING N N 29 
SS9 S11 H22 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SS9 SMILES           ACDLabs              12.01 "C(N)CCNCCCCCS"                                          
SS9 InChI            InChI                1.03  InChI=1S/C8H20N2S/c9-5-4-7-10-6-2-1-3-8-11/h10-11H,1-9H2 
SS9 InChIKey         InChI                1.03  UEAAWEWNMXIYCA-UHFFFAOYSA-N                              
SS9 SMILES_CANONICAL CACTVS               3.385 NCCCNCCCCCS                                              
SS9 SMILES           CACTVS               3.385 NCCCNCCCCCS                                              
SS9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C(CCNCCCN)CCS"                                          
SS9 SMILES           "OpenEye OEToolkits" 1.9.2 "C(CCNCCCN)CCS"                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SS9 "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(3-aminopropyl)amino]pentane-1-thiol" 
SS9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "5-(3-azanylpropylamino)pentane-1-thiol"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SS9 "Create component" 2015-05-18 RCSB 
SS9 "Initial release"  2015-07-29 RCSB 
# 
