data_VG9
# 
_chem_comp.id                                    VG9 
_chem_comp.name                                  "6-{[(2,5-DIETHOXYPHENYL)AMINO]METHYL}-5-METHYLPYRIDO[2,3-D]PYRIMIDINE-2,4-DIAMINE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             ? 
_chem_comp.formula                               "C19 H24 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-11-11 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.433 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VG9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2W3B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VG9 N2   N2   N 0 1 N N N 2.254  26.978 -6.798 2.254  26.978 -6.798 N2   VG9 1  
VG9 C2   C2   C 0 1 Y N N 2.277  27.593 -5.596 2.277  27.593 -5.596 C2   VG9 2  
VG9 N3   N3   N 0 1 Y N N 2.135  26.868 -4.472 2.135  26.868 -4.472 N3   VG9 3  
VG9 C4   C4   C 0 1 Y N N 2.111  27.457 -3.265 2.111  27.457 -3.265 C4   VG9 4  
VG9 N4   N4   N 0 1 N N N 2.032  26.587 -2.233 2.032  26.587 -2.233 N4   VG9 5  
VG9 N1   N1   N 0 1 Y N N 2.456  28.923 -5.550 2.456  28.923 -5.550 N1   VG9 6  
VG9 C8A  C8A  C 0 1 Y N N 2.461  29.569 -4.362 2.461  29.569 -4.362 C8A  VG9 7  
VG9 N8   N8   N 0 1 Y N N 2.669  30.904 -4.380 2.669  30.904 -4.380 N8   VG9 8  
VG9 C7   C7   C 0 1 Y N N 2.678  31.606 -3.247 2.678  31.606 -3.247 C7   VG9 9  
VG9 C6   C6   C 0 1 Y N N 2.497  30.990 -2.018 2.497  30.990 -2.018 C6   VG9 10 
VG9 C5   C5   C 0 1 Y N N 2.278  29.607 -1.947 2.278  29.607 -1.947 C5   VG9 11 
VG9 C5A  C5A  C 0 1 N N N 1.824  29.044 -0.616 1.824  29.044 -0.616 C5A  VG9 12 
VG9 C4A  C4A  C 0 1 Y N N 2.286  28.866 -3.161 2.286  28.866 -3.161 C4A  VG9 13 
VG9 C9   C9   C 0 1 N N N 2.517  31.810 -0.732 2.517  31.810 -0.732 C9   VG9 14 
VG9 N10  N10  N 0 1 N N N 2.964  33.175 -0.964 2.964  33.175 -0.964 N10  VG9 15 
VG9 C11  C11  C 0 1 Y N N 2.161  34.234 -1.222 2.161  34.234 -1.222 C11  VG9 16 
VG9 C12  C12  C 0 1 Y N N 2.767  35.480 -1.364 2.767  35.480 -1.364 C12  VG9 17 
VG9 O2   O2   O 0 1 N N N 4.123  35.589 -1.218 4.123  35.589 -1.218 O2   VG9 18 
VG9 C21  C21  C 0 1 N N N 4.725  35.469 0.075  4.725  35.469 0.075  C21  VG9 19 
VG9 C22  C22  C 0 1 N N N 6.027  34.718 0.028  6.027  34.718 0.028  C22  VG9 20 
VG9 C13  C13  C 0 1 Y N N 2.017  36.615 -1.650 2.017  36.615 -1.650 C13  VG9 21 
VG9 C14  C14  C 0 1 Y N N 0.632  36.508 -1.795 0.632  36.508 -1.795 C14  VG9 22 
VG9 C15  C15  C 0 1 Y N N 0.012  35.263 -1.659 0.012  35.263 -1.659 C15  VG9 23 
VG9 C16  C16  C 0 1 Y N N 0.777  34.122 -1.381 0.777  34.122 -1.381 C16  VG9 24 
VG9 O5   O5   O 0 1 N N N -1.349 35.179 -1.803 -1.349 35.179 -1.803 O5   VG9 25 
VG9 C51  C51  C 0 1 N N N -1.980 34.112 -2.523 -1.980 34.112 -2.523 C51  VG9 26 
VG9 C52  C52  C 0 1 N N N -2.374 34.601 -3.897 -2.374 34.601 -3.897 C52  VG9 27 
VG9 H21N H21N H 0 0 N N N 2.248  27.665 -7.524 2.248  27.665 -7.524 H21N VG9 28 
VG9 H22N H22N H 0 0 N N N 3.065  26.400 -6.892 3.065  26.400 -6.892 H22N VG9 29 
VG9 H41N H41N H 0 0 N N N 2.012  25.652 -2.586 2.013  25.652 -2.586 H41N VG9 30 
VG9 H42N H42N H 0 0 N N N 2.828  26.702 -1.638 2.828  26.702 -1.638 H42N VG9 31 
VG9 H7   H7   H 0 1 N N N 2.829  32.675 -3.287 2.829  32.675 -3.287 H7   VG9 32 
VG9 H91C H91C H 0 0 N N N 1.499  31.839 -0.317 1.498  31.839 -0.317 H91C VG9 33 
VG9 H92C H92C H 0 0 N N N 3.222  31.334 -0.034 3.221  31.334 -0.034 H92C VG9 34 
VG9 H5A1 H5A1 H 0 0 N N N 1.714  27.953 -0.697 1.714  27.952 -0.697 H5A1 VG9 35 
VG9 H5A2 H5A2 H 0 0 N N N 2.571  29.281 0.156  2.571  29.281 0.156  H5A2 VG9 36 
VG9 H5A3 H5A3 H 0 0 N N N 0.857  29.490 -0.340 0.857  29.490 -0.340 H5A3 VG9 37 
VG9 H10  H10  H 0 1 N N N 3.444  33.426 -0.124 3.444  33.426 -0.124 H10  VG9 38 
VG9 H16  H16  H 0 1 N N N 0.298  33.158 -1.290 0.298  33.158 -1.290 H16  VG9 39 
VG9 H13  H13  H 0 1 N N N 2.502  37.574 -1.759 2.502  37.574 -1.759 H13  VG9 40 
VG9 H211 H211 H 0 0 N N N 4.917  36.479 0.467  4.917  36.479 0.467  H211 VG9 41 
VG9 H212 H212 H 0 0 N N N 4.033  34.908 0.721  4.033  34.908 0.720  H212 VG9 42 
VG9 H221 H221 H 0 0 N N N 6.308  34.535 -1.020 6.307  34.535 -1.020 H221 VG9 43 
VG9 H222 H222 H 0 0 N N N 6.811  35.313 0.519  6.811  35.313 0.519  H222 VG9 44 
VG9 H223 H223 H 0 0 N N N 5.915  33.757 0.551  5.915  33.757 0.551  H223 VG9 45 
VG9 H14  H14  H 0 1 N N N 0.041  37.386 -2.012 0.041  37.386 -2.012 H14  VG9 46 
VG9 H511 H511 H 0 0 N N N -1.280 33.269 -2.620 -1.280 33.269 -2.619 H511 VG9 47 
VG9 H512 H512 H 0 0 N N N -2.877 33.780 -1.979 -2.877 33.780 -1.979 H512 VG9 48 
VG9 H521 H521 H 0 0 N N N -2.470 35.697 -3.883 -2.470 35.697 -3.883 H521 VG9 49 
VG9 H522 H522 H 0 0 N N N -1.602 34.310 -4.625 -1.602 34.310 -4.625 H522 VG9 50 
VG9 H523 H523 H 0 0 N N N -3.337 34.153 -4.183 -3.337 34.153 -4.183 H523 VG9 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VG9 N2  C2   SING N N 1  
VG9 C2  N3   SING Y N 2  
VG9 C2  N1   DOUB Y N 3  
VG9 N3  C4   DOUB Y N 4  
VG9 C4  N4   SING N N 5  
VG9 C4  C4A  SING Y N 6  
VG9 N1  C8A  SING Y N 7  
VG9 C8A N8   SING Y N 8  
VG9 C8A C4A  DOUB Y N 9  
VG9 N8  C7   DOUB Y N 10 
VG9 C7  C6   SING Y N 11 
VG9 C6  C5   DOUB Y N 12 
VG9 C6  C9   SING N N 13 
VG9 C5  C5A  SING N N 14 
VG9 C5  C4A  SING Y N 15 
VG9 C9  N10  SING N N 16 
VG9 N10 C11  SING N N 17 
VG9 C11 C12  SING Y N 18 
VG9 C11 C16  DOUB Y N 19 
VG9 C12 O2   SING N N 20 
VG9 C12 C13  DOUB Y N 21 
VG9 O2  C21  SING N N 22 
VG9 C21 C22  SING N N 23 
VG9 C13 C14  SING Y N 24 
VG9 C14 C15  DOUB Y N 25 
VG9 C15 C16  SING Y N 26 
VG9 C15 O5   SING N N 27 
VG9 O5  C51  SING N N 28 
VG9 C51 C52  SING N N 29 
VG9 N2  H21N SING N N 30 
VG9 N2  H22N SING N N 31 
VG9 N4  H41N SING N N 32 
VG9 N4  H42N SING N N 33 
VG9 C7  H7   SING N N 34 
VG9 C9  H91C SING N N 35 
VG9 C9  H92C SING N N 36 
VG9 C5A H5A1 SING N N 37 
VG9 C5A H5A2 SING N N 38 
VG9 C5A H5A3 SING N N 39 
VG9 N10 H10  SING N N 40 
VG9 C16 H16  SING N N 41 
VG9 C13 H13  SING N N 42 
VG9 C21 H211 SING N N 43 
VG9 C21 H212 SING N N 44 
VG9 C22 H221 SING N N 45 
VG9 C22 H222 SING N N 46 
VG9 C22 H223 SING N N 47 
VG9 C14 H14  SING N N 48 
VG9 C51 H511 SING N N 49 
VG9 C51 H512 SING N N 50 
VG9 C52 H521 SING N N 51 
VG9 C52 H522 SING N N 52 
VG9 C52 H523 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VG9 SMILES           ACDLabs              10.04 "n1cc(c(c2c1nc(nc2N)N)C)CNc3cc(OCC)ccc3OCC"                                                                                                           
VG9 SMILES_CANONICAL CACTVS               3.341 "CCOc1ccc(OCC)c(NCc2cnc3nc(N)nc(N)c3c2C)c1"                                                                                                           
VG9 SMILES           CACTVS               3.341 "CCOc1ccc(OCC)c(NCc2cnc3nc(N)nc(N)c3c2C)c1"                                                                                                           
VG9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCOc1ccc(c(c1)NCc2cnc3c(c2C)c(nc(n3)N)N)OCC"                                                                                                         
VG9 SMILES           "OpenEye OEToolkits" 1.5.0 "CCOc1ccc(c(c1)NCc2cnc3c(c2C)c(nc(n3)N)N)OCC"                                                                                                         
VG9 InChI            InChI                1.03  "InChI=1S/C19H24N6O2/c1-4-26-13-6-7-15(27-5-2)14(8-13)22-9-12-10-23-18-16(11(12)3)17(20)24-19(21)25-18/h6-8,10,22H,4-5,9H2,1-3H3,(H4,20,21,23,24,25)" 
VG9 InChIKey         InChI                1.03  KKMWDWUZXFYKLD-UHFFFAOYSA-N                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VG9 "SYSTEMATIC NAME" ACDLabs              10.04 "6-{[(2,5-diethoxyphenyl)amino]methyl}-5-methylpyrido[2,3-d]pyrimidine-2,4-diamine"  
VG9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "6-[[(2,5-diethoxyphenyl)amino]methyl]-5-methyl-pyrido[3,2-e]pyrimidine-2,4-diamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VG9 "Create component"     2008-11-11 EBI  
VG9 "Modify aromatic_flag" 2011-06-04 RCSB 
VG9 "Modify descriptor"    2011-06-04 RCSB 
# 
