data_2BA
#

_chem_comp.id                                   2BA
_chem_comp.name                                 
;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8
]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H24 N10 O12 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-01-29
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       658.412
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2BA
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3C1Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2BA  P       P     P  0  1  N  N  R  67.613  14.395  -38.053    0.737   2.301   0.576  P       2BA   1  
2BA  O1P     O1P   O  0  1  N  N  N  69.033  14.775  -37.740    0.935   2.627  -0.854  O1P     2BA   2  
2BA  O2P     O2P   O  0  1  N  N  N  67.228  13.142  -37.288    0.464   3.656   1.403  O2P     2BA   3  
2BA  "O5'"   O5*   O  0  1  N  N  N  66.604  15.574  -37.607   -0.526   1.315   0.732  "O5'"   2BA   4  
2BA  "C5'"   C5*   C  0  1  N  N  N  65.225  15.369  -37.807   -1.877   1.736   0.522  "C5'"   2BA   5  
2BA  "C4'"   C4*   C  0  1  N  N  R  64.318  16.584  -37.798   -2.831   0.719   1.149  "C4'"   2BA   6  
2BA  "O4'"   O4*   O  0  1  N  N  N  64.680  17.458  -36.743   -4.173   1.207   1.079  "O4'"   2BA   7  
2BA  "C3'"   C3*   C  0  1  N  N  S  64.388  17.405  -39.041   -2.776  -0.602   0.366  "C3'"   2BA   8  
2BA  "O3'"   O3*   O  0  1  N  N  N  63.959  16.629  -40.177   -2.059  -1.589   1.112  "O3'"   2BA   9  
2BA  "C2'"   C2*   C  0  1  N  N  R  63.714  18.662  -38.504   -4.247  -1.025   0.197  "C2'"   2BA  10  
2BA  "O2'"   O2*   O  0  1  N  N  N  62.276  18.574  -38.502   -4.497  -2.245   0.897  "O2'"   2BA  11  
2BA  "C1'"   C1*   C  0  1  N  N  R  64.303  18.801  -37.089   -5.063   0.121   0.813  "C1'"   2BA  12  
2BA  N9      N9    N  0  1  Y  N  N  65.756  19.727  -37.179   -6.101   0.551  -0.128  N9      2BA  13  
2BA  C8      C8    C  0  1  Y  N  N  67.133  19.526  -37.063   -6.009   1.582  -1.015  C8      2BA  14  
2BA  N7      N7    N  0  1  Y  N  N  67.779  20.645  -37.216   -7.115   1.684  -1.694  N7      2BA  15  
2BA  C5      C5    C  0  1  Y  N  N  66.891  21.650  -37.425   -7.984   0.728  -1.287  C5      2BA  16  
2BA  C6      C6    C  0  1  Y  N  N  66.979  23.064  -37.651   -9.291   0.362  -1.649  C6      2BA  17  
2BA  N6      N6    N  0  1  N  N  N  68.212  23.671  -37.681   -9.972   1.052  -2.637  N6      2BA  18  
2BA  N1      N1    N  0  1  Y  N  N  65.827  23.793  -37.828   -9.859  -0.662  -1.021  N1      2BA  19  
2BA  C2      C2    C  0  1  Y  N  N  64.594  23.218  -37.801   -9.218  -1.327  -0.078  C2      2BA  20  
2BA  N3      N3    N  0  1  Y  N  N  64.489  21.887  -37.592   -7.993  -1.020   0.294  N3      2BA  21  
2BA  C4      C4    C  0  1  Y  N  N  65.576  21.078  -37.408   -7.342  -0.014  -0.281  C4      2BA  22  
2BA  P1      1P    P  0  1  N  N  R  64.450  16.884  -41.720   -0.718  -2.295   0.569  P1      2BA  23  
2BA  O1P1    1O1P  O  0  0  N  N  N  64.545  18.381  -41.839   -0.830  -2.512  -0.891  O1P1    2BA  24  
2BA  O2P1    1O2P  O  0  0  N  N  N  63.434  16.316  -42.694   -0.521  -3.712   1.308  O2P1    2BA  25  
2BA  "O5'1"  1O5*  O  0  0  N  N  N  65.844  16.189  -42.028    0.549  -1.350   0.875  "O5'1"  2BA  26  
2BA  "C5'1"  1C5*  C  0  0  N  N  N  65.930  14.797  -41.967    1.898  -1.750   0.627  "C5'1"  2BA  27  
2BA  "C4'1"  1C4*  C  0  0  N  N  R  67.264  14.145  -41.801    2.853  -0.717   1.225  "C4'1"  2BA  28  
2BA  "O4'1"  1O4*  O  0  0  N  N  N  68.150  14.646  -42.813    4.198  -1.198   1.150  "O4'1"  2BA  29  
2BA  "C3'1"  1C3*  C  0  0  N  N  S  67.891  14.431  -40.439    2.783   0.591   0.421  "C3'1"  2BA  30  
2BA  "O3'1"  1O3*  O  0  0  N  N  N  67.432  13.718  -39.334    2.056   1.580   1.150  "O3'1"  2BA  31  
2BA  "C2'1"  1C2*  C  0  0  N  N  R  69.352  14.310  -40.845    4.250   1.026   0.245  "C2'1"  2BA  32  
2BA  "O2'1"  1O2*  O  0  0  N  N  N  69.805  12.971  -40.718    4.493   2.248   0.945  "O2'1"  2BA  33  
2BA  "C1'1"  1C1*  C  0  0  N  N  R  69.445  14.768  -42.289    5.080  -0.113   0.854  "C1'1"  2BA  34  
2BA  N91     1N9   N  0  1  Y  N  N  70.085  16.099  -42.272    6.099  -0.550  -0.104  N91     2BA  35  
2BA  C81     1C8   C  0  1  Y  N  N  69.380  17.309  -42.405    5.990  -1.589  -0.979  C81     2BA  36  
2BA  N71     1N7   N  0  1  Y  N  N  70.191  18.334  -42.343    7.081  -1.696  -1.680  N71     2BA  37  
2BA  C51     1C5   C  0  1  Y  N  N  71.456  17.876  -42.170    7.957  -0.734  -1.301  C51     2BA  38  
2BA  C61     1C6   C  0  1  Y  N  N  72.757  18.472  -42.025    9.255  -0.369  -1.694  C61     2BA  39  
2BA  N61     1N6   N  0  1  N  N  N  72.902  19.846  -42.042    9.916  -1.068  -2.690  N61     2BA  40  
2BA  N11     1N1   N  0  1  Y  N  N  73.850  17.654  -41.864    9.834   0.662  -1.088  N11     2BA  41  
2BA  C21     1C2   C  0  1  Y  N  N  73.752  16.291  -41.835    9.211   1.335  -0.138  C21     2BA  42  
2BA  N31     1N3   N  0  1  Y  N  N  72.540  15.705  -41.964    7.995   1.029   0.263  N31     2BA  43  
2BA  C41     1C4   C  0  1  Y  N  N  71.396  16.436  -42.127    7.334   0.017  -0.289  C41     2BA  44  
2BA  "H5'"   H5*   H  0  1  N  N  N  65.115  14.898  -38.795   -2.030   2.711   0.986  "H5'"   2BA  45  
2BA  "H5'A"  H5*A  H  0  0  N  N  N  64.902  14.771  -36.942   -2.074   1.808  -0.548  "H5'A"  2BA  46  
2BA  "H4'"   H4*   H  0  1  N  N  N  63.304  16.172  -37.691   -2.556   0.545   2.190  "H4'"   2BA  47  
2BA  "H3'"   H3*   H  0  1  N  N  N  65.328  17.721  -39.516   -2.311  -0.447  -0.608  "H3'"   2BA  48  
2BA  "H2'"   H2*   H  0  1  N  N  N  63.906  19.543  -39.134   -4.489  -1.138  -0.860  "H2'"   2BA  49  
2BA  "HO2'"  HO2*  H  0  0  N  N  N  61.961  18.555  -37.606   -5.409  -2.560   0.825  "HO2'"  2BA  50  
2BA  "H1'"   H1*   H  0  1  N  N  N  63.605  19.273  -36.382   -5.525  -0.213   1.742  "H1'"   2BA  51  
2BA  H8      H8    H  0  1  N  N  N  67.599  18.571  -36.872   -5.146   2.220  -1.136  H8      2BA  52  
2BA  HN6     HN6   H  0  1  N  N  N  68.488  23.818  -38.631   -9.546   1.798  -3.089  HN6     2BA  53  
2BA  HN6A    HN6A  H  0  0  N  N  N  68.162  24.551  -37.208  -10.874   0.790  -2.878  HN6A    2BA  54  
2BA  H2      H2    H  0  1  N  N  N  63.708  23.819  -37.945   -9.717  -2.152   0.408  H2      2BA  55  
2BA  "HC5'"  HC5*  H  0  0  N  N  N  65.328  14.490  -41.099    2.080  -2.721   1.086  "HC5'"  2BA  56  
2BA  HC5A    HC5A  H  0  0  N  N  N  65.599  14.469  -42.964    2.065  -1.819  -0.448  HC5A    2BA  57  
2BA  "HC4'"  HC4*  H  0  0  N  N  N  67.113  13.059  -41.886    2.589  -0.526   2.266  "HC4'"  2BA  58  
2BA  "HC3'"  HC3*  H  0  0  N  N  N  67.618  15.396  -39.986    2.321   0.414  -0.551  "HC3'"  2BA  59  
2BA  "HC2'"  HC2*  H  0  0  N  N  N  69.988  14.926  -40.193    4.485   1.143  -0.813  "HC2'"  2BA  60  
2BA  HO2A    HO2A  H  0  0  N  N  N  69.906  12.587  -41.581    5.402   2.570   0.869  HO2A    2BA  61  
2BA  "HC1'"  HC1*  H  0  0  N  N  N  70.080  14.178  -42.967    5.561   0.231   1.770  "HC1'"  2BA  62  
2BA  HC8     HC8   H  0  1  N  N  N  68.311  17.382  -42.540    5.126  -2.230  -1.075  HC8     2BA  63  
2BA  H1N6    H1N6  H  0  0  N  N  N  72.937  20.190  -41.104    9.483  -1.819  -3.125  H1N6    2BA  64  
2BA  H1NA    H1NA  H  0  0  N  N  N  73.749  20.086  -42.516   10.813  -0.806  -2.952  H1NA    2BA  65  
2BA  HC2     HC2   H  0  1  N  N  N  74.637  15.685  -41.710    9.719   2.166   0.329  HC2     2BA  66  
2BA  H2P     H2P   H  0  1  N  N  N  67.148  12.414  -37.892   -0.318   4.144   1.110  H2P     2BA  67  
2BA  H2OP    H2OP  H  0  0  N  N  N  62.602  16.197  -42.251    0.269  -4.194   1.029  H2OP    2BA  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2BA  P       O1P     DOUB  N  N   1  
2BA  P       O2P     SING  N  N   2  
2BA  P       "O5'"   SING  N  N   3  
2BA  P       "O3'1"  SING  N  N   4  
2BA  "O5'"   "C5'"   SING  N  N   5  
2BA  "C5'"   "C4'"   SING  N  N   6  
2BA  "C4'"   "O4'"   SING  N  N   7  
2BA  "C4'"   "C3'"   SING  N  N   8  
2BA  "O4'"   "C1'"   SING  N  N   9  
2BA  "C3'"   "O3'"   SING  N  N  10  
2BA  "C3'"   "C2'"   SING  N  N  11  
2BA  "O3'"   P1      SING  N  N  12  
2BA  "C2'"   "O2'"   SING  N  N  13  
2BA  "C2'"   "C1'"   SING  N  N  14  
2BA  "C1'"   N9      SING  N  N  15  
2BA  N9      C8      SING  Y  N  16  
2BA  N9      C4      SING  Y  N  17  
2BA  C8      N7      DOUB  Y  N  18  
2BA  N7      C5      SING  Y  N  19  
2BA  C5      C6      DOUB  Y  N  20  
2BA  C5      C4      SING  Y  N  21  
2BA  C6      N6      SING  N  N  22  
2BA  C6      N1      SING  Y  N  23  
2BA  N1      C2      DOUB  Y  N  24  
2BA  C2      N3      SING  Y  N  25  
2BA  N3      C4      DOUB  Y  N  26  
2BA  P1      O1P1    DOUB  N  N  27  
2BA  P1      O2P1    SING  N  N  28  
2BA  P1      "O5'1"  SING  N  N  29  
2BA  "O5'1"  "C5'1"  SING  N  N  30  
2BA  "C5'1"  "C4'1"  SING  N  N  31  
2BA  "C4'1"  "O4'1"  SING  N  N  32  
2BA  "C4'1"  "C3'1"  SING  N  N  33  
2BA  "O4'1"  "C1'1"  SING  N  N  34  
2BA  "C3'1"  "O3'1"  SING  N  N  35  
2BA  "C3'1"  "C2'1"  SING  N  N  36  
2BA  "C2'1"  "O2'1"  SING  N  N  37  
2BA  "C2'1"  "C1'1"  SING  N  N  38  
2BA  "C1'1"  N91     SING  N  N  39  
2BA  N91     C81     SING  Y  N  40  
2BA  N91     C41     SING  Y  N  41  
2BA  C81     N71     DOUB  Y  N  42  
2BA  N71     C51     SING  Y  N  43  
2BA  C51     C61     DOUB  Y  N  44  
2BA  C51     C41     SING  Y  N  45  
2BA  C61     N61     SING  N  N  46  
2BA  C61     N11     SING  Y  N  47  
2BA  N11     C21     DOUB  Y  N  48  
2BA  C21     N31     SING  Y  N  49  
2BA  N31     C41     DOUB  Y  N  50  
2BA  "C5'"   "H5'"   SING  N  N  51  
2BA  "C5'"   "H5'A"  SING  N  N  52  
2BA  "C4'"   "H4'"   SING  N  N  53  
2BA  "C3'"   "H3'"   SING  N  N  54  
2BA  "C2'"   "H2'"   SING  N  N  55  
2BA  "O2'"   "HO2'"  SING  N  N  56  
2BA  "C1'"   "H1'"   SING  N  N  57  
2BA  C8      H8      SING  N  N  58  
2BA  N6      HN6     SING  N  N  59  
2BA  N6      HN6A    SING  N  N  60  
2BA  C2      H2      SING  N  N  61  
2BA  "C5'1"  "HC5'"  SING  N  N  62  
2BA  "C5'1"  HC5A    SING  N  N  63  
2BA  "C4'1"  "HC4'"  SING  N  N  64  
2BA  "C3'1"  "HC3'"  SING  N  N  65  
2BA  "C2'1"  "HC2'"  SING  N  N  66  
2BA  "O2'1"  HO2A    SING  N  N  67  
2BA  "C1'1"  "HC1'"  SING  N  N  68  
2BA  C81     HC8     SING  N  N  69  
2BA  N61     H1N6    SING  N  N  70  
2BA  N61     H1NA    SING  N  N  71  
2BA  C21     HC2     SING  N  N  72  
2BA  O2P     H2P     SING  N  N  73  
2BA  O2P1    H2OP    SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2BA  SMILES            ACDLabs               10.04  "O=P5(OCC7OC(n1c2ncnc(N)c2nc1)C(O)C7OP(=O)(O)OCC6OC(n3c4ncnc(N)c4nc3)C(O)C6O5)O"  
2BA  SMILES_CANONICAL  CACTVS                3.341  "Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P@](O)(=O)O[C@H]4[C@H]3O)n6cnc7c(N)ncnc67"  
2BA  SMILES            CACTVS                3.341  "Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]4[CH]3O)n6cnc7c(N)ncnc67"  
2BA  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@](=O)(O[C@@H]5[C@@H](CO[P@](=O)(O4)O)O[C@H]([C@@H]5O)n6cnc7c6ncnc7N)O)O)N"  
2BA  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(COP(=O)(O4)O)OC(C5O)n6cnc7c6ncnc7N)O)O)N"  
2BA  InChI             InChI                 1.03   "InChI=1S/C20H24N10O12P2/c21-15-9-17(25-3-23-15)29(5-27-9)19-11(31)13-7(39-19)1-37-43(33,34)42-14-8(2-38-44(35,36)41-13)40-20(12(14)32)30-6-28-10-16(22)24-4-26-18(10)30/h3-8,11-14,19-20,31-32H,1-2H2,(H,33,34)(H,35,36)(H2,21,23,25)(H2,22,24,26)/t7-,8-,11-,12-,13-,14-,19-,20-/m1/s1"  
2BA  InChIKey          InChI                 1.03   PDXMFTWFFKBFIN-XPWFQUROSA-N  
#
_pdbx_chem_comp_identifier.comp_id          2BA
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  10.04
_pdbx_chem_comp_identifier.identifier       "(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2BA  "Create component"      2008-01-29  PDBJ  
2BA  "Modify aromatic_flag"  2011-06-04  RCSB  
2BA  "Modify descriptor"     2011-06-04  RCSB  
2BA  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2BA
_pdbx_chem_comp_synonyms.name        "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
