data_3YA
# 
_chem_comp.id                                    3YA 
_chem_comp.name                                  "N-{4-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]benzoyl}-L-glutamic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H24 N4 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-12-10 
_chem_comp.pdbx_modified_date                    2016-04-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.514 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3YA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4ZYU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3YA C13 C1  C 0 1 Y N N 21.878 -16.003 -34.406 2.969   0.332  -0.180 C13 3YA 1  
3YA C14 C2  C 0 1 Y N N 23.254 -17.956 -34.778 2.616   -1.644 -1.521 C14 3YA 2  
3YA C16 C3  C 0 1 Y N N 24.340 -17.288 -34.236 1.289   -1.298 -1.670 C16 3YA 3  
3YA N1  N1  N 0 1 N N N 22.304 -17.139 -27.028 -8.738  1.419  0.757  N1  3YA 4  
3YA C2  C4  C 0 1 N N N 21.897 -16.122 -26.258 -9.830  0.916  0.130  C2  3YA 5  
3YA N3  N2  N 0 1 N N N 22.575 -14.966 -26.194 -9.788  -0.202 -0.562 N3  3YA 6  
3YA C4  C5  C 0 1 N N N 23.699 -14.746 -26.897 -8.656  -0.905 -0.684 C4  3YA 7  
3YA S5  S1  S 0 1 Y N N 24.163 -18.007 -28.762 -5.952  1.177  1.372  S5  3YA 8  
3YA C6  C6  C 0 1 Y N N 25.433 -16.974 -29.207 -5.210  -0.255 0.684  C6  3YA 9  
3YA C7  C7  C 0 1 Y N N 25.310 -15.766 -28.536 -6.089  -0.964 0.000  C7  3YA 10 
3YA C8  C8  C 0 1 Y N N 24.189 -15.747 -27.722 -7.429  -0.410 -0.024 C8  3YA 11 
3YA C9  C9  C 0 1 Y N N 23.422 -16.904 -27.721 -7.520  0.772  0.688  C9  3YA 12 
3YA O10 O1  O 0 1 N N N 24.269 -13.665 -26.786 -8.637  -1.940 -1.330 O10 3YA 13 
3YA N11 N3  N 0 1 N N N 20.724 -16.258 -25.477 -11.016 1.594  0.220  N11 3YA 14 
3YA C12 C10 C 0 1 Y N N 22.027 -17.308 -34.866 3.467   -0.829 -0.773 C12 3YA 15 
3YA C17 C11 C 0 1 N N N 20.823 -18.057 -35.456 4.890   -1.194 -0.609 C17 3YA 16 
3YA O18 O2  O 0 1 N N N 20.765 -18.322 -36.643 5.322   -2.206 -1.127 O18 3YA 17 
3YA N19 N4  N 0 1 N N N 19.785 -18.435 -34.563 5.709   -0.406 0.114  N19 3YA 18 
3YA C20 C12 C 0 1 N N S 18.637 -19.145 -35.003 7.120   -0.767 0.276  C20 3YA 19 
3YA C21 C13 C 0 1 N N N 18.399 -20.287 -34.037 7.941   0.493  0.556  C21 3YA 20 
3YA C22 C14 C 0 1 N N N 19.642 -21.149 -34.020 7.896   1.413  -0.665 C22 3YA 21 
3YA C23 C15 C 0 1 N N N 19.968 -21.546 -35.446 8.705   2.655  -0.389 C23 3YA 22 
3YA O24 O3  O 0 1 N N N 21.029 -21.152 -35.999 8.809   3.610  -1.326 O24 3YA 23 
3YA O25 O4  O 0 1 N N N 19.168 -22.273 -36.089 9.259   2.789  0.676  O25 3YA 24 
3YA C26 C16 C 0 1 N N N 17.418 -18.248 -35.116 7.263   -1.727 1.429  C26 3YA 25 
3YA O27 O5  O 0 1 N N N 17.038 -17.558 -34.130 8.475   -2.197 1.764  O27 3YA 26 
3YA O28 O6  O 0 1 N N N 16.779 -18.193 -36.203 6.287   -2.074 2.051  O28 3YA 27 
3YA C29 C17 C 0 1 N N N 26.524 -17.352 -30.177 -3.759  -0.627 0.850  C29 3YA 28 
3YA C30 C18 C 0 1 N N N 26.054 -17.066 -31.593 -2.940  -0.010 -0.285 C30 3YA 29 
3YA C31 C19 C 0 1 N N N 25.699 -15.597 -31.735 -1.467  -0.388 -0.115 C31 3YA 30 
3YA C32 C20 C 0 1 N N N 25.379 -15.267 -33.182 -0.648  0.230  -1.251 C32 3YA 31 
3YA C33 C21 C 0 1 Y N N 24.195 -15.979 -33.787 0.802   -0.143 -1.084 C33 3YA 32 
3YA C15 C22 C 0 1 Y N N 22.966 -15.335 -33.863 1.640   0.667  -0.337 C15 3YA 33 
3YA H1  H1  H 0 1 N N N 20.918 -15.512 -34.472 3.621   0.964  0.404  H1  3YA 34 
3YA H2  H2  H 0 1 N N N 23.360 -18.972 -35.129 2.994   -2.546 -1.980 H2  3YA 35 
3YA H3  H3  H 0 1 N N N 25.297 -17.782 -34.162 0.628   -1.929 -2.246 H3  3YA 36 
3YA H5  H5  H 0 1 N N N 26.002 -14.943 -28.636 -5.830  -1.884 -0.502 H5  3YA 37 
3YA H6  H6  H 0 1 N N N 20.420 -15.503 -24.896 -11.065 2.420  0.727  H6  3YA 38 
3YA H7  H7  H 0 1 N N N 20.200 -17.109 -25.506 -11.807 1.249  -0.222 H7  3YA 39 
3YA H8  H8  H 0 1 N N N 19.865 -18.194 -33.596 5.365   0.402  0.527  H8  3YA 40 
3YA H9  H9  H 0 1 N N N 18.835 -19.575 -35.996 7.481   -1.240 -0.638 H9  3YA 41 
3YA H10 H10 H 0 1 N N N 18.206 -19.890 -33.029 7.524   1.014  1.418  H10 3YA 42 
3YA H11 H11 H 0 1 N N N 17.536 -20.883 -34.368 8.974   0.215  0.765  H11 3YA 43 
3YA H12 H12 H 0 1 N N N 19.461 -22.050 -33.416 8.313   0.892  -1.527 H12 3YA 44 
3YA H13 H13 H 0 1 N N N 20.481 -20.582 -33.591 6.863   1.691  -0.873 H13 3YA 45 
3YA H14 H14 H 0 1 N N N 21.068 -21.489 -36.886 9.338   4.388  -1.102 H14 3YA 46 
3YA H15 H15 H 0 1 N N N 16.266 -17.060 -34.371 8.517   -2.810 2.510  H15 3YA 47 
3YA H16 H16 H 0 1 N N N 26.753 -18.423 -30.074 -3.395  -0.252 1.807  H16 3YA 48 
3YA H17 H17 H 0 1 N N N 27.427 -16.762 -29.963 -3.657  -1.712 0.824  H17 3YA 49 
3YA H18 H18 H 0 1 N N N 25.167 -17.678 -31.813 -3.304  -0.386 -1.241 H18 3YA 50 
3YA H19 H19 H 0 1 N N N 26.857 -17.317 -32.301 -3.042  1.075  -0.258 H19 3YA 51 
3YA H20 H20 H 0 1 N N N 26.551 -14.985 -31.403 -1.104  -0.012 0.841  H20 3YA 52 
3YA H21 H21 H 0 1 N N N 24.822 -15.374 -31.110 -1.365  -1.473 -0.142 H21 3YA 53 
3YA H22 H22 H 0 1 N N N 26.264 -15.517 -33.786 -1.012  -0.146 -2.207 H22 3YA 54 
3YA H23 H23 H 0 1 N N N 25.186 -14.186 -33.244 -0.751  1.314  -1.224 H23 3YA 55 
3YA H24 H24 H 0 1 N N N 22.859 -14.323 -33.502 1.252   1.563  0.125  H24 3YA 56 
3YA H25 H25 H 0 1 N N N 21.810 -18.007 -27.080 -8.813  2.247  1.257  H25 3YA 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3YA O18 C17 DOUB N N 1  
3YA O28 C26 DOUB N N 2  
3YA O25 C23 DOUB N N 3  
3YA O24 C23 SING N N 4  
3YA C17 C12 SING N N 5  
3YA C17 N19 SING N N 6  
3YA C23 C22 SING N N 7  
3YA C26 C20 SING N N 8  
3YA C26 O27 SING N N 9  
3YA C20 N19 SING N N 10 
3YA C20 C21 SING N N 11 
3YA C12 C14 DOUB Y N 12 
3YA C12 C13 SING Y N 13 
3YA C14 C16 SING Y N 14 
3YA C13 C15 DOUB Y N 15 
3YA C16 C33 DOUB Y N 16 
3YA C21 C22 SING N N 17 
3YA C15 C33 SING Y N 18 
3YA C33 C32 SING N N 19 
3YA C32 C31 SING N N 20 
3YA C31 C30 SING N N 21 
3YA C30 C29 SING N N 22 
3YA C29 C6  SING N N 23 
3YA C6  S5  SING Y N 24 
3YA C6  C7  DOUB Y N 25 
3YA S5  C9  SING Y N 26 
3YA C7  C8  SING Y N 27 
3YA C8  C9  DOUB Y N 28 
3YA C8  C4  SING N N 29 
3YA C9  N1  SING N N 30 
3YA N1  C2  SING N N 31 
3YA C4  O10 DOUB N N 32 
3YA C4  N3  SING N N 33 
3YA C2  N3  DOUB N N 34 
3YA C2  N11 SING N N 35 
3YA C13 H1  SING N N 36 
3YA C14 H2  SING N N 37 
3YA C16 H3  SING N N 38 
3YA C7  H5  SING N N 39 
3YA N11 H6  SING N N 40 
3YA N11 H7  SING N N 41 
3YA N19 H8  SING N N 42 
3YA C20 H9  SING N N 43 
3YA C21 H10 SING N N 44 
3YA C21 H11 SING N N 45 
3YA C22 H12 SING N N 46 
3YA C22 H13 SING N N 47 
3YA O24 H14 SING N N 48 
3YA O27 H15 SING N N 49 
3YA C29 H16 SING N N 50 
3YA C29 H17 SING N N 51 
3YA C30 H18 SING N N 52 
3YA C30 H19 SING N N 53 
3YA C31 H20 SING N N 54 
3YA C31 H21 SING N N 55 
3YA C32 H22 SING N N 56 
3YA C32 H23 SING N N 57 
3YA C15 H24 SING N N 58 
3YA N1  H25 SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3YA SMILES           ACDLabs              12.01 "c1cc(ccc1C(NC(CCC(O)=O)C(O)=O)=O)CCCCc2sc3NC(=NC(=O)c3c2)N"                                                                                                                                             
3YA InChI            InChI                1.03  "InChI=1S/C22H24N4O6S/c23-22-25-19(30)15-11-14(33-20(15)26-22)4-2-1-3-12-5-7-13(8-6-12)18(29)24-16(21(31)32)9-10-17(27)28/h5-8,11,16H,1-4,9-10H2,(H,24,29)(H,27,28)(H,31,32)(H3,23,25,26,30)/t16-/m0/s1" 
3YA InChIKey         InChI                1.03  KVBZUTNKUVNMNN-INIZCTEOSA-N                                                                                                                                                                              
3YA SMILES_CANONICAL CACTVS               3.385 "NC1=NC(=O)c2cc(CCCCc3ccc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)sc2N1"                                                                                                                                        
3YA SMILES           CACTVS               3.385 "NC1=NC(=O)c2cc(CCCCc3ccc(cc3)C(=O)N[CH](CCC(O)=O)C(O)=O)sc2N1"                                                                                                                                          
3YA SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CCCCc2cc3c(s2)NC(=NC3=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O"                                                                                                                                        
3YA SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CCCCc2cc3c(s2)NC(=NC3=O)N)C(=O)NC(CCC(=O)O)C(=O)O"                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3YA "SYSTEMATIC NAME" ACDLabs              12.01 "N-{4-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]benzoyl}-L-glutamic acid"                        
3YA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[4-[4-(2-azanyl-4-oxidanylidene-1H-thieno[2,3-d]pyrimidin-6-yl)butyl]phenyl]carbonylamino]pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3YA "Create component" 2014-12-10 RCSB 
3YA "Modify name"      2015-06-04 RCSB 
3YA "Initial release"  2016-04-20 RCSB 
# 
