data_LBA
#

_chem_comp.id                                   LBA
_chem_comp.name                                 "2-(4-{3-[4-(6-carboxy-1H-benzimidazol-2-yl)phenoxy]-2-hydroxypropoxy}phenyl)-1H-benzimidazole-5-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H24 N4 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-15
_chem_comp.pdbx_modified_date                   2019-05-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       564.545
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LBA
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6NY0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LBA  C18  C18  C  0  1  Y  N  N   3.892  -1.182  2.797    3.641   2.244  -0.095  C18  LBA   1  
LBA  C23  C23  C  0  1  N  N  N  -0.544   0.040  3.895   -1.212   1.882   0.070  C23  LBA   2  
LBA  O19  O1   O  0  1  N  N  N   3.047  -0.094  3.013    2.417   2.832  -0.098  O19  LBA   3  
LBA  C20  C20  C  0  1  N  N  N   1.824  -0.335  3.700    1.285   1.974   0.057  C20  LBA   4  
LBA  C21  C21  C  0  1  N  N  S   0.596   0.077  2.882    0.004   2.810   0.029  C21  LBA   5  
LBA  O22  O2   O  0  1  N  N  N   0.635   1.416  2.314   -0.023   3.680   1.163  O22  LBA   6  
LBA  O24  O3   O  0  1  N  N  N  -1.817  -0.174  3.260   -2.406   2.654  -0.073  O24  LBA   7  
LBA  C25  C25  C  0  1  Y  N  N  -2.759   0.803  3.357   -3.583   1.977  -0.058  C25  LBA   8  
LBA  H4   H4   H  0  1  N  N  N  -0.360  -0.777  4.608   -1.146   1.160  -0.744  H4   LBA   9  
LBA  H5   H5   H  0  1  N  N  N  -0.572   0.998  4.435   -1.233   1.353   1.023  H5   LBA  10  
LBA  H6   H6   H  0  1  N  N  N   1.829   0.237  4.639    1.264   1.249  -0.757  H6   LBA  11  
LBA  H7   H7   H  0  1  N  N  N   1.753  -1.409  3.925    1.355   1.449   1.010  H7   LBA  12  
LBA  H8   H8   H  0  1  N  N  N   0.413  -0.670  2.095   -0.023   3.404  -0.885  H8   LBA  13  
LBA  H9   H9   H  0  1  N  N  N   0.441   1.372  1.385   -0.001   3.218   2.013  H9   LBA  14  
LBA  C1   C1   C  0  1  Y  N  N       ?       ?      ?    4.783   3.021  -0.242  C1   LBA  15  
LBA  C2   C2   C  0  1  Y  N  N       ?       ?      ?    6.027   2.429  -0.240  C2   LBA  16  
LBA  C3   C3   C  0  1  Y  N  N       ?       ?      ?    6.139   1.045  -0.089  C3   LBA  17  
LBA  C4   C4   C  0  1  Y  N  N       ?       ?      ?    4.988   0.267   0.059  C4   LBA  18  
LBA  C5   C5   C  0  1  Y  N  N       ?       ?      ?    3.748   0.868   0.060  C5   LBA  19  
LBA  C6   C6   C  0  1  Y  N  N       ?       ?      ?   -4.781   2.668  -0.192  C6   LBA  20  
LBA  C7   C7   C  0  1  Y  N  N       ?       ?      ?   -5.978   1.985  -0.178  C7   LBA  21  
LBA  C8   C8   C  0  1  Y  N  N       ?       ?      ?   -5.985   0.597  -0.027  C8   LBA  22  
LBA  C9   C9   C  0  1  Y  N  N       ?       ?      ?   -4.779  -0.094   0.108  C9   LBA  23  
LBA  C10  C10  C  0  1  Y  N  N       ?       ?      ?   -3.586   0.596   0.087  C10  LBA  24  
LBA  C24  C24  C  0  1  Y  N  N       ?       ?      ?    7.470   0.405  -0.086  C24  LBA  25  
LBA  C22  C22  C  0  1  Y  N  N       ?       ?      ?   -7.266  -0.140  -0.010  C22  LBA  26  
LBA  N2   N2   N  0  1  Y  N  N       ?       ?      ?    7.699  -0.936   0.054  N2   LBA  27  
LBA  C13  C13  C  0  1  Y  N  N       ?       ?      ?    9.068  -1.122   0.003  C13  LBA  28  
LBA  C14  C14  C  0  1  Y  N  N       ?       ?      ?    9.631   0.158  -0.171  C14  LBA  29  
LBA  N1   N1   N  0  1  Y  N  N       ?       ?      ?    8.612   1.038  -0.223  N1   LBA  30  
LBA  N4   N4   N  0  1  Y  N  N       ?       ?      ?   -7.393  -1.496   0.131  N4   LBA  31  
LBA  C16  C16  C  0  1  Y  N  N       ?       ?      ?   -8.741  -1.788   0.097  C16  LBA  32  
LBA  C17  C17  C  0  1  Y  N  N       ?       ?      ?   -9.404  -0.557  -0.070  C17  LBA  33  
LBA  N3   N3   N  0  1  Y  N  N       ?       ?      ?   -8.452   0.408  -0.123  N3   LBA  34  
LBA  C11  C11  C  0  1  Y  N  N       ?       ?      ?  -10.797  -0.531  -0.141  C11  LBA  35  
LBA  C12  C12  C  0  1  Y  N  N       ?       ?      ?  -11.510  -1.723  -0.046  C12  LBA  36  
LBA  C15  C15  C  0  1  Y  N  N       ?       ?      ?  -10.833  -2.938   0.119  C15  LBA  37  
LBA  C19  C19  C  0  1  Y  N  N       ?       ?      ?   -9.470  -2.967   0.189  C19  LBA  38  
LBA  C26  C26  C  0  1  Y  N  N       ?       ?      ?   11.023   0.298  -0.259  C26  LBA  39  
LBA  C27  C27  C  0  1  Y  N  N       ?       ?      ?   11.826  -0.799  -0.177  C27  LBA  40  
LBA  C28  C28  C  0  1  Y  N  N       ?       ?      ?   11.272  -2.075  -0.004  C28  LBA  41  
LBA  C29  C29  C  0  1  Y  N  N       ?       ?      ?    9.888  -2.232   0.085  C29  LBA  42  
LBA  C30  C30  C  0  1  N  N  N       ?       ?      ?   12.153  -3.254   0.083  C30  LBA  43  
LBA  O3   O4   O  0  1  N  N  N       ?       ?      ?   13.490  -3.104  -0.004  O3   LBA  44  
LBA  O4   O5   O  0  1  N  N  N       ?       ?      ?   11.674  -4.361   0.233  O4   LBA  45  
LBA  H1   H1   H  0  1  N  N  N       ?       ?      ?    4.696   4.092  -0.359  H1   LBA  46  
LBA  H2   H2   H  0  1  N  N  N       ?       ?      ?    6.914   3.033  -0.355  H2   LBA  47  
LBA  H3   H3   H  0  1  N  N  N       ?       ?      ?    5.070  -0.803   0.175  H3   LBA  48  
LBA  H10  H10  H  0  1  N  N  N       ?       ?      ?    2.858   0.267   0.175  H10  LBA  49  
LBA  H11  H11  H  0  1  N  N  N       ?       ?      ?   -4.774   3.741  -0.308  H11  LBA  50  
LBA  H12  H12  H  0  1  N  N  N       ?       ?      ?   -6.908   2.522  -0.282  H12  LBA  51  
LBA  H13  H13  H  0  1  N  N  N       ?       ?      ?   -4.781  -1.168   0.225  H13  LBA  52  
LBA  H14  H14  H  0  1  N  N  N       ?       ?      ?   -2.653   0.062   0.191  H14  LBA  53  
LBA  H15  H15  H  0  1  N  N  N       ?       ?      ?    7.027  -1.627   0.167  H15  LBA  54  
LBA  H16  H16  H  0  1  N  N  N       ?       ?      ?   -6.670  -2.134   0.235  H16  LBA  55  
LBA  H17  H17  H  0  1  N  N  N       ?       ?      ?  -11.318   0.407  -0.268  H17  LBA  56  
LBA  H18  H18  H  0  1  N  N  N       ?       ?      ?  -11.393  -3.859   0.192  H18  LBA  57  
LBA  H19  H19  H  0  1  N  N  N       ?       ?      ?   -8.957  -3.909   0.317  H19  LBA  58  
LBA  H20  H20  H  0  1  N  N  N       ?       ?      ?   11.459   1.277  -0.393  H20  LBA  59  
LBA  H21  H21  H  0  1  N  N  N       ?       ?      ?   12.898  -0.685  -0.246  H21  LBA  60  
LBA  H22  H22  H  0  1  N  N  N       ?       ?      ?    9.460  -3.215   0.219  H22  LBA  61  
LBA  H23  H23  H  0  1  N  N  N       ?       ?      ?   14.026  -3.906   0.059  H23  LBA  62  
LBA  C31  C31  C  0  1  N  N  N       ?       ?      ?  -12.984  -1.706  -0.120  C31  LBA  63  
LBA  O2   O6   O  0  1  N  N  N       ?       ?      ?  -13.676  -2.858  -0.029  O2   LBA  64  
LBA  O1   O7   O  0  1  N  N  N       ?       ?      ?  -13.573  -0.653  -0.263  O1   LBA  65  
LBA  H24  H24  H  0  1  N  N  N       ?       ?      ?  -14.640  -2.796  -0.083  H24  LBA  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LBA  O22  C21  SING  N  N   1  
LBA  C18  O19  SING  N  N   2  
LBA  C21  C20  SING  N  N   3  
LBA  C21  C23  SING  N  N   4  
LBA  O19  C20  SING  N  N   5  
LBA  O24  C25  SING  N  N   6  
LBA  O24  C23  SING  N  N   7  
LBA  C23  H4   SING  N  N   8  
LBA  C23  H5   SING  N  N   9  
LBA  C20  H6   SING  N  N  10  
LBA  C20  H7   SING  N  N  11  
LBA  C21  H8   SING  N  N  12  
LBA  O22  H9   SING  N  N  13  
LBA  C18  C1   SING  Y  N  14  
LBA  C1   C2   DOUB  Y  N  15  
LBA  C2   C3   SING  Y  N  16  
LBA  C3   C4   DOUB  Y  N  17  
LBA  C4   C5   SING  Y  N  18  
LBA  C5   C18  DOUB  Y  N  19  
LBA  C25  C6   SING  Y  N  20  
LBA  C6   C7   DOUB  Y  N  21  
LBA  C7   C8   SING  Y  N  22  
LBA  C8   C9   DOUB  Y  N  23  
LBA  C9   C10  SING  Y  N  24  
LBA  C10  C25  DOUB  Y  N  25  
LBA  C3   C24  SING  N  N  26  
LBA  C8   C22  SING  N  N  27  
LBA  C24  N2   SING  Y  N  28  
LBA  N2   C13  SING  Y  N  29  
LBA  C13  C14  SING  Y  N  30  
LBA  C14  N1   SING  Y  N  31  
LBA  N1   C24  DOUB  Y  N  32  
LBA  C22  N4   SING  Y  N  33  
LBA  N4   C16  SING  Y  N  34  
LBA  C16  C17  SING  Y  N  35  
LBA  C17  N3   SING  Y  N  36  
LBA  N3   C22  DOUB  Y  N  37  
LBA  C17  C11  DOUB  Y  N  38  
LBA  C11  C12  SING  Y  N  39  
LBA  C12  C15  DOUB  Y  N  40  
LBA  C15  C19  SING  Y  N  41  
LBA  C19  C16  DOUB  Y  N  42  
LBA  C14  C26  DOUB  Y  N  43  
LBA  C26  C27  SING  Y  N  44  
LBA  C27  C28  DOUB  Y  N  45  
LBA  C28  C29  SING  Y  N  46  
LBA  C29  C13  DOUB  Y  N  47  
LBA  C28  C30  SING  N  N  48  
LBA  C30  O3   SING  N  N  49  
LBA  C30  O4   DOUB  N  N  50  
LBA  C1   H1   SING  N  N  51  
LBA  C2   H2   SING  N  N  52  
LBA  C4   H3   SING  N  N  53  
LBA  C5   H10  SING  N  N  54  
LBA  C6   H11  SING  N  N  55  
LBA  C7   H12  SING  N  N  56  
LBA  C9   H13  SING  N  N  57  
LBA  C10  H14  SING  N  N  58  
LBA  N2   H15  SING  N  N  59  
LBA  N4   H16  SING  N  N  60  
LBA  C11  H17  SING  N  N  61  
LBA  C15  H18  SING  N  N  62  
LBA  C19  H19  SING  N  N  63  
LBA  C26  H20  SING  N  N  64  
LBA  C27  H21  SING  N  N  65  
LBA  C29  H22  SING  N  N  66  
LBA  O3   H23  SING  N  N  67  
LBA  C12  C31  SING  N  N  68  
LBA  C31  O2   SING  N  N  69  
LBA  C31  O1   DOUB  N  N  70  
LBA  O2   H24  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LBA  SMILES            ACDLabs               12.01  "c4(OCC(COc1ccc(cc1)c2nc3c(n2)cc(cc3)C(O)=O)O)ccc(cc4)c5nc6c(n5)ccc(c6)C(O)=O"  
LBA  InChI             InChI                 1.03   "InChI=1S/C31H24N4O7/c36-21(15-41-22-7-1-17(2-8-22)28-32-24-11-5-19(30(37)38)13-26(24)34-28)16-42-23-9-3-18(4-10-23)29-33-25-12-6-20(31(39)40)14-27(25)35-29/h1-14,21,36H,15-16H2,(H,32,34)(H,33,35)(H,37,38)(H,39,40)"  
LBA  InChIKey          InChI                 1.03   GBODXIMEGJFLQT-UHFFFAOYSA-N  
LBA  SMILES_CANONICAL  CACTVS                3.385  "O[C@H](COc1ccc(cc1)c2[nH]c3ccc(cc3n2)C(O)=O)COc4ccc(cc4)c5[nH]c6cc(ccc6n5)C(O)=O"  
LBA  SMILES            CACTVS                3.385  "O[CH](COc1ccc(cc1)c2[nH]c3ccc(cc3n2)C(O)=O)COc4ccc(cc4)c5[nH]c6cc(ccc6n5)C(O)=O"  
LBA  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1c2[nH]c3ccc(cc3n2)C(=O)O)OC[C@H](COc4ccc(cc4)c5[nH]c6cc(ccc6n5)C(=O)O)O"  
LBA  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1c2[nH]c3ccc(cc3n2)C(=O)O)OCC(COc4ccc(cc4)c5[nH]c6cc(ccc6n5)C(=O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LBA  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(4-{3-[4-(6-carboxy-1H-benzimidazol-2-yl)phenoxy]-2-hydroxypropoxy}phenyl)-1H-benzimidazole-5-carboxylic acid"  
LBA  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-[4-[(2~{S})-3-[4-(6-carboxy-1~{H}-benzimidazol-2-yl)phenoxy]-2-oxidanyl-propoxy]phenyl]-1~{H}-benzimidazole-5-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LBA  "Create component"  2019-02-15  RCSB  
LBA  "Initial release"   2019-05-29  RCSB  
##
