data_0DB
#

_chem_comp.id                                   0DB
_chem_comp.name                                 "N-({1-[(2S)-2-carboxy-4-phenylbutyl]cyclopentyl}carbonyl)-L-tryptophan"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H32 N2 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        CCT
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-11-12
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       476.564
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0DB
_chem_comp.pdbx_model_coordinates_details       "not provided"
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1THL
_chem_comp.pdbx_subcomponent_list               "CLT CCM TRP"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0DB  CA    C1   C  0  1  N  N  R  35.866  41.206   -5.497   2.051  -1.235  -1.389  CA    CLT   1  
0DB  CB1   C2   C  0  1  N  N  N  34.653  40.561   -6.164   2.926  -0.794  -0.213  CB1   CLT   2  
0DB  CG    C3   C  0  1  N  N  N  35.012  39.303   -6.823   4.049   0.110  -0.725  CG    CLT   3  
0DB  CD    C4   C  0  1  Y  N  N  33.840  38.610   -7.443   4.911   0.545   0.432  CD    CLT   4  
0DB  CE1   C5   C  0  1  Y  N  N  33.691  38.709   -8.821   6.005  -0.214   0.803  CE1   CLT   5  
0DB  CE2   C6   C  0  1  Y  N  N  33.035  37.713   -6.733   4.610   1.706   1.120  CE2   CLT   6  
0DB  CZ1   C7   C  0  1  Y  N  N  32.685  38.030   -9.488   6.795   0.184   1.865  CZ1   CLT   7  
0DB  CZ2   C8   C  0  1  Y  N  N  32.053  36.976   -7.392   5.401   2.105   2.182  CZ2   CLT   8  
0DB  CH    C9   C  0  1  Y  N  N  31.921  37.079   -8.767   6.492   1.342   2.556  CH    CLT   9  
0DB  CB2   C10  C  0  1  N  N  N  35.998  42.527   -6.173   2.899  -1.960  -2.402  CB2   CLT  10  
0DB  OG1   O1   O  0  1  N  N  N  35.042  43.317   -6.085   3.842  -2.622  -2.038  OG1   CLT  11  
0DB  OG2   O2   O  0  1  N  N  N  36.985  42.865   -6.859   2.608  -1.869  -3.709  OG2   CLT  12  
0DB  CH2   C11  C  0  1  N  N  N  35.543  41.348   -3.995   0.951  -2.171  -0.882  CH2   CCM  13  
0DB  CA1   C12  C  0  1  N  N  N  36.769  41.879   -3.193  -0.026  -1.382  -0.008  CA    CCM  14  
0DB  CB11  C13  C  0  0  N  N  N  36.841  43.422   -3.179  -1.205  -2.280   0.407  CB1   CCM  15  
0DB  CB21  C14  C  0  0  N  N  N  36.439  41.576   -1.715   0.670  -0.939   1.295  CB2   CCM  16  
0DB  CG1   C15  C  0  1  N  N  N  37.403  43.807   -1.807  -1.184  -2.351   1.947  CG1   CCM  17  
0DB  CG2   C16  C  0  1  N  N  N  36.848  42.747   -0.827  -0.431  -1.067   2.377  CG2   CCM  18  
0DB  C     C17  C  0  1  N  N  N  38.099  41.213   -3.573  -0.534  -0.178  -0.759  C     CCM  19  
0DB  O     O3   O  0  1  N  N  N  39.155  41.849   -3.742  -0.263  -0.036  -1.933  O     CCM  20  
0DB  N     N1   N  0  1  N  N  N  38.068  39.901   -3.669  -1.289   0.742  -0.126  N     TRP  21  
0DB  CA2   C18  C  0  1  N  N  S  39.244  39.131   -4.028  -1.782   1.912  -0.856  CA    TRP  22  
0DB  C1    C19  C  0  1  N  N  N  38.969  38.044   -5.041  -0.727   2.988  -0.853  C     TRP  23  
0DB  O1    O5   O  0  1  N  N  N  37.766  37.752   -5.297   0.329   2.796  -0.298  O     TRP  24  
0DB  CB    C20  C  0  1  N  N  N  40.012  38.645   -2.781  -3.049   2.439  -0.178  CB    TRP  25  
0DB  CG3   C21  C  0  1  Y  N  N  39.222  37.667   -1.991  -4.144   1.409  -0.290  CG    TRP  26  
0DB  CD1   C22  C  0  1  Y  N  N  38.173  37.949   -1.182  -5.098   1.356  -1.233  CD1   TRP  27  
0DB  CD2   C23  C  0  1  Y  N  N  39.252  36.264   -2.161  -4.364   0.271   0.606  CD2   TRP  28  
0DB  NE1   N2   N  0  1  Y  N  N  37.639  36.779   -0.711  -5.915   0.281  -1.010  NE1   TRP  29  
0DB  CE21  C24  C  0  0  Y  N  N  38.253  35.733   -1.333  -5.494  -0.403   0.108  CE2   TRP  30  
0DB  CE3   C25  C  0  1  Y  N  N  39.957  35.410   -3.013  -3.716  -0.205   1.747  CE3   TRP  31  
0DB  CZ21  C26  C  0  0  Y  N  N  38.025  34.352   -1.275  -5.951  -1.543   0.762  CZ2   TRP  32  
0DB  CZ3   C27  C  0  1  Y  N  N  39.714  34.057   -2.977  -4.183  -1.326   2.375  CZ3   TRP  33  
0DB  CH21  C28  C  0  0  Y  N  N  38.755  33.530   -2.110  -5.296  -1.996   1.885  CH2   TRP  34  
0DB  OXT   O6   O  0  1  N  Y  N  39.973  37.478   -5.577  -0.960   4.159  -1.466  OXT   TRP  35  
0DB  HA1   H1   H  0  1  N  N  N  36.803  40.636   -5.582   1.599  -0.360  -1.853  HA1   CLT  36  
0DB  HB11  H3   H  0  0  N  N  N  33.893  40.355   -5.396   2.318  -0.247   0.507  HB11  CLT  37  
0DB  HB12  H4   H  0  0  N  N  N  34.266  41.254   -6.926   3.358  -1.672   0.268  HB12  CLT  38  
0DB  HG1   H5   H  0  1  N  N  N  35.741  39.525   -7.616   4.657  -0.437  -1.445  HG1   CLT  39  
0DB  HG2   H6   H  0  1  N  N  N  35.422  38.633   -6.053   3.618   0.988  -1.207  HG2   CLT  40  
0DB  HE1   H7   H  0  1  N  N  N  34.374  39.328   -9.384   6.242  -1.119   0.263  HE1   CLT  41  
0DB  HE2   H8   H  0  1  N  N  N  33.175  37.591   -5.669   3.758   2.302   0.828  HE2   CLT  42  
0DB  HZ1   H9   H  0  1  N  N  N  32.488  38.221  -10.533   7.650  -0.409   2.154  HZ1   CLT  43  
0DB  HZ2   H10  H  0  1  N  N  N  31.397  36.326   -6.832   5.166   3.012   2.719  HZ2   CLT  44  
0DB  HH    H11  H  0  1  N  N  N  31.233  36.432   -9.291   7.109   1.654   3.385  HH    CLT  45  
0DB  HO2   H12  H  0  1  N  N  N  36.835  43.728   -7.227   3.223  -2.288  -4.326  HO2   CLT  46  
0DB  HH21  H13  H  0  0  N  N  N  35.261  40.361   -3.599   0.417  -2.596  -1.732  HH21  CCM  47  
0DB  HH22  H14  H  0  0  N  N  N  34.720  42.069   -3.885   1.398  -2.973  -0.295  HH22  CCM  48  
0DB  HB13  H16  H  0  0  N  N  N  37.497  43.787   -3.983  -2.144  -1.844   0.066  HB11  CCM  49  
0DB  HB14  H17  H  0  0  N  N  N  35.851  43.871   -3.347  -1.080  -3.278  -0.015  HB12  CCM  50  
0DB  HB21  H18  H  0  0  N  N  N  35.357  41.407   -1.614   1.508  -1.598   1.523  HB21  CCM  51  
0DB  HB22  H19  H  0  0  N  N  N  36.994  40.680   -1.402   1.008   0.095   1.215  HB22  CCM  52  
0DB  HG11  H20  H  0  0  N  N  N  38.503  43.795   -1.816  -2.199  -2.348   2.343  HG11  CCM  53  
0DB  HG12  H21  H  0  0  N  N  N  37.108  44.826   -1.516  -0.645  -3.238   2.281  HG12  CCM  54  
0DB  HG21  H22  H  0  0  N  N  N  35.986  43.139   -0.266   0.011  -1.191   3.365  HG21  CCM  55  
0DB  HG22  H23  H  0  0  N  N  N  37.590  42.454   -0.070  -1.096  -0.204   2.355  HG22  CCM  56  
0DB  H     H25  H  0  1  N  N  N  37.209  39.421   -3.489  -1.506   0.628   0.813  H     TRP  57  
0DB  HA    H27  H  0  1  N  N  N  39.921  39.820   -4.555  -2.010   1.630  -1.884  HA    TRP  58  
0DB  HB2   H28  H  0  1  N  N  N  40.945  38.162   -3.108  -2.843   2.637   0.873  HB2   TRP  59  
0DB  HB3   H29  H  0  1  N  N  N  40.215  39.517   -2.142  -3.366   3.360  -0.667  HB3   TRP  60  
0DB  HD1   H30  H  0  1  N  N  N  37.814  38.940   -0.946  -5.205   2.059  -2.046  HD1   TRP  61  
0DB  HE11  H31  H  0  0  N  N  N  36.917  36.704   -0.023  -6.676   0.037  -1.560  HE1   TRP  62  
0DB  HE3   H32  H  0  1  N  N  N  40.690  35.811   -3.697  -2.849   0.310   2.133  HE3   TRP  63  
0DB  HZ21  H33  H  0  0  N  N  N  37.296  33.940   -0.593  -6.817  -2.070   0.390  HZ2   TRP  64  
0DB  HZ3   H34  H  0  1  N  N  N  40.270  33.396   -3.625  -3.681  -1.694   3.257  HZ3   TRP  65  
0DB  HH2   H35  H  0  1  N  N  N  38.582  32.464   -2.092  -5.653  -2.881   2.392  HH2   TRP  66  
0DB  HXT   H36  H  0  1  N  Y  N  39.674  36.814   -6.188  -0.253   4.818  -1.438  HXT   TRP  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0DB  CA    CB1   SING  N  N   1  
0DB  CA    CB2   SING  N  N   2  
0DB  CA    HA1   SING  N  N   3  
0DB  CB1   CG    SING  N  N   4  
0DB  CB1   HB11  SING  N  N   5  
0DB  CB1   HB12  SING  N  N   6  
0DB  CG    CD    SING  N  N   7  
0DB  CG    HG1   SING  N  N   8  
0DB  CG    HG2   SING  N  N   9  
0DB  CD    CE1   DOUB  Y  N  10  
0DB  CD    CE2   SING  Y  N  11  
0DB  CE1   CZ1   SING  Y  N  12  
0DB  CE1   HE1   SING  N  N  13  
0DB  CE2   CZ2   DOUB  Y  N  14  
0DB  CE2   HE2   SING  N  N  15  
0DB  CZ1   CH    DOUB  Y  N  16  
0DB  CZ1   HZ1   SING  N  N  17  
0DB  CZ2   CH    SING  Y  N  18  
0DB  CZ2   HZ2   SING  N  N  19  
0DB  CH    HH    SING  N  N  20  
0DB  CB2   OG1   DOUB  N  N  21  
0DB  CB2   OG2   SING  N  N  22  
0DB  OG2   HO2   SING  N  N  23  
0DB  CH2   CA1   SING  N  N  24  
0DB  CH2   HH21  SING  N  N  25  
0DB  CH2   HH22  SING  N  N  26  
0DB  CA1   CB11  SING  N  N  27  
0DB  CA1   CB21  SING  N  N  28  
0DB  CA1   C     SING  N  N  29  
0DB  CB11  CG1   SING  N  N  30  
0DB  CB11  HB13  SING  N  N  31  
0DB  CB11  HB14  SING  N  N  32  
0DB  CB21  CG2   SING  N  N  33  
0DB  CB21  HB21  SING  N  N  34  
0DB  CB21  HB22  SING  N  N  35  
0DB  CG1   CG2   SING  N  N  36  
0DB  CG1   HG11  SING  N  N  37  
0DB  CG1   HG12  SING  N  N  38  
0DB  CG2   HG21  SING  N  N  39  
0DB  CG2   HG22  SING  N  N  40  
0DB  C     O     DOUB  N  N  41  
0DB  N     CA2   SING  N  N  42  
0DB  N     H     SING  N  N  43  
0DB  CA2   C1    SING  N  N  44  
0DB  CA2   CB    SING  N  N  45  
0DB  CA2   HA    SING  N  N  46  
0DB  C1    O1    DOUB  N  N  47  
0DB  C1    OXT   SING  N  N  48  
0DB  CB    CG3   SING  N  N  49  
0DB  CB    HB2   SING  N  N  50  
0DB  CB    HB3   SING  N  N  51  
0DB  CG3   CD1   DOUB  Y  N  52  
0DB  CG3   CD2   SING  Y  N  53  
0DB  CD1   NE1   SING  Y  N  54  
0DB  CD1   HD1   SING  N  N  55  
0DB  CD2   CE21  DOUB  Y  N  56  
0DB  CD2   CE3   SING  Y  N  57  
0DB  NE1   CE21  SING  Y  N  58  
0DB  NE1   HE11  SING  N  N  59  
0DB  CE21  CZ21  SING  Y  N  60  
0DB  CE3   CZ3   DOUB  Y  N  61  
0DB  CE3   HE3   SING  N  N  62  
0DB  CZ21  CH21  DOUB  Y  N  63  
0DB  CZ21  HZ21  SING  N  N  64  
0DB  CZ3   CH21  SING  Y  N  65  
0DB  CZ3   HZ3   SING  N  N  66  
0DB  CH21  HH2   SING  N  N  67  
0DB  OXT   HXT   SING  N  N  68  
0DB  CA    CH2   SING  N  N  69  
0DB  C     N     SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0DB  SMILES            ACDLabs  10.04  "O=C(O)C(CCc1ccccc1)CC4(C(=O)NC(C(=O)O)Cc3c2ccccc2nc3)CCCC4"  
0DB  SMILES_CANONICAL  CACTVS   3.341  "OC(=O)[C@H](CCc1ccccc1)CC2(CCCC2)C(=O)N[C@@H](Cc3c[nH]c4ccccc34)C(O)=O"  
0DB  SMILES            CACTVS   3.341  "OC(=O)[CH](CCc1ccccc1)CC2(CCCC2)C(=O)N[CH](Cc3c[nH]c4ccccc34)C(O)=O"  
0DB  InChI             InChI     1.03  "InChI=1S/C28H32N2O5/c31-25(32)20(13-12-19-8-2-1-3-9-19)17-28(14-6-7-15-28)27(35)30-24(26(33)34)16-21-18-29-23-11-5-4-10-22(21)23/h1-5,8-11,18,20,24,29H,6-7,12-17H2,(H,30,35)(H,31,32)(H,33,34)/t20-,24+/m1/s1"  
0DB  InChIKey          InChI     1.03  MPZIROHQGMKFGS-YKSBVNFPSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0DB  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-({1-[(2S)-2-carboxy-4-phenylbutyl]cyclopentyl}carbonyl)-L-tryptophan"  
0DB  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-2-[[1-[[(2S)-1-hydroxy-3-(1H-indol-3-yl)-1-oxo-propan-2-yl]carbamoyl]cyclopentyl]methyl]-4-phenyl-butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0DB  "Create component"      2008-11-12  RCSB  
0DB  "Modify aromatic_flag"  2011-06-04  RCSB  
0DB  "Modify descriptor"     2011-06-04  RCSB  
0DB  "Modify synonyms"       2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     0DB
_pdbx_chem_comp_synonyms.name        CCT
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
