data_5VB
# 
_chem_comp.id                                    5VB 
_chem_comp.name                                  "1-[(3-thiophen-3-ylphenyl)methyl]-3~{H}-pyrrol-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H13 N O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-07 
_chem_comp.pdbx_modified_date                    2023-02-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        255.335 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5VB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F6O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5VB C10 C1  C 0 1 Y N N -17.555 -12.809 -6.760 0.014  -2.981 0.316  C10 5VB 1  
5VB C13 C2  C 0 1 Y N N -16.781 -15.553 -4.225 -2.500 -0.199 0.054  C13 5VB 2  
5VB C15 C3  C 0 1 Y N N -16.925 -17.457 -2.804 -4.694 0.103  0.664  C15 5VB 3  
5VB C17 C4  C 0 1 Y N N -15.733 -16.311 -4.793 -2.627 1.065  -0.391 C17 5VB 4  
5VB O01 O1  O 0 1 N N N -19.946 -10.559 -1.241 2.102  2.281  -0.491 O01 5VB 5  
5VB C02 C5  C 0 1 N N N -18.519 -10.752 -1.216 2.905  1.495  -0.035 C02 5VB 6  
5VB C03 C6  C 0 1 N N N -17.745 -10.906 -0.104 3.934  1.760  1.046  C03 5VB 7  
5VB C04 C7  C 0 1 N N N -16.428 -11.053 -0.576 4.642  0.429  1.200  C04 5VB 8  
5VB C05 C8  C 0 1 N N N -16.481 -10.977 -1.982 4.079  -0.397 0.343  C05 5VB 9  
5VB N06 N1  N 0 1 N N N -17.724 -10.810 -2.321 3.065  0.201  -0.380 N06 5VB 10 
5VB C07 C9  C 0 1 N N N -18.233 -10.674 -3.668 2.268  -0.482 -1.402 C07 5VB 11 
5VB C08 C10 C 0 1 Y N N -17.854 -11.911 -4.549 1.056  -1.107 -0.759 C08 5VB 12 
5VB C09 C11 C 0 1 Y N N -17.866 -11.770 -5.934 1.122  -2.401 -0.275 C09 5VB 13 
5VB C11 C12 C 0 1 Y N N -17.204 -14.046 -6.187 -1.164 -2.271 0.426  C11 5VB 14 
5VB C12 C13 C 0 1 Y N N -17.167 -14.184 -4.777 -1.236 -0.967 -0.060 C12 5VB 15 
5VB C14 C14 C 0 1 Y N N -17.461 -16.172 -3.136 -3.652 -0.724 0.638  C14 5VB 16 
5VB S16 S1  S 0 1 Y N N -15.677 -17.763 -3.898 -4.259 1.639  -0.073 S16 5VB 17 
5VB C18 C15 C 0 1 Y N N -17.491 -13.179 -3.962 -0.117 -0.387 -0.655 C18 5VB 18 
5VB H1  H1  H 0 1 N N N -17.577 -12.686 -7.833 0.070  -3.994 0.688  H1  5VB 19 
5VB H2  H2  H 0 1 N N N -17.256 -18.106 -2.007 -5.664 -0.134 1.075  H2  5VB 20 
5VB H3  H3  H 0 1 N N N -15.099 -16.030 -5.621 -1.847 1.638  -0.870 H3  5VB 21 
5VB H4  H4  H 0 1 N N N -17.824 -10.021 0.544  4.635  2.532  0.727  H4  5VB 22 
5VB H5  H5  H 0 1 N N N -18.054 -11.800 0.458  3.447  2.047  1.977  H5  5VB 23 
5VB H6  H6  H 0 1 N N N -15.543 -11.197 0.026  5.451  0.202  1.879  H6  5VB 24 
5VB H7  H7  H 0 1 N N N -15.640 -11.045 -2.656 4.375  -1.429 0.221  H7  5VB 25 
5VB H8  H8  H 0 1 N N N -17.807 -9.767  -4.122 1.948  0.238  -2.155 H8  5VB 26 
5VB H9  H9  H 0 1 N N N -19.329 -10.584 -3.629 2.870  -1.258 -1.874 H9  5VB 27 
5VB H10 H10 H 0 1 N N N -18.128 -10.815 -6.364 2.043  -2.960 -0.359 H10 5VB 28 
5VB H11 H11 H 0 1 N N N -16.964 -14.887 -6.820 -2.028 -2.725 0.887  H11 5VB 29 
5VB H12 H12 H 0 1 N N N -18.293 -15.719 -2.616 -3.695 -1.726 1.039  H12 5VB 30 
5VB H13 H13 H 0 1 N N N -17.482 -13.311 -2.890 -0.167 0.623  -1.033 H13 5VB 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5VB C10 C11 DOUB Y N 1  
5VB C10 C09 SING Y N 2  
5VB C11 C12 SING Y N 3  
5VB C09 C08 DOUB Y N 4  
5VB C17 C13 DOUB Y N 5  
5VB C17 S16 SING Y N 6  
5VB C12 C13 SING N N 7  
5VB C12 C18 DOUB Y N 8  
5VB C08 C18 SING Y N 9  
5VB C08 C07 SING N N 10 
5VB C13 C14 SING Y N 11 
5VB S16 C15 SING Y N 12 
5VB C07 N06 SING N N 13 
5VB C14 C15 DOUB Y N 14 
5VB N06 C05 SING N N 15 
5VB N06 C02 SING N N 16 
5VB C05 C04 DOUB N N 17 
5VB O01 C02 DOUB N N 18 
5VB C02 C03 SING N N 19 
5VB C04 C03 SING N N 20 
5VB C10 H1  SING N N 21 
5VB C15 H2  SING N N 22 
5VB C17 H3  SING N N 23 
5VB C03 H4  SING N N 24 
5VB C03 H5  SING N N 25 
5VB C04 H6  SING N N 26 
5VB C05 H7  SING N N 27 
5VB C07 H8  SING N N 28 
5VB C07 H9  SING N N 29 
5VB C09 H10 SING N N 30 
5VB C11 H11 SING N N 31 
5VB C14 H12 SING N N 32 
5VB C18 H13 SING N N 33 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5VB InChI            InChI                1.03  "InChI=1S/C15H13NOS/c17-15-5-2-7-16(15)10-12-3-1-4-13(9-12)14-6-8-18-11-14/h1-4,6-9,11H,5,10H2" 
5VB InChIKey         InChI                1.03  DMVGEVMEROXRGX-UHFFFAOYSA-N                                                                     
5VB SMILES_CANONICAL CACTVS               3.385 "O=C1CC=CN1Cc2cccc(c2)c3cscc3"                                                                  
5VB SMILES           CACTVS               3.385 "O=C1CC=CN1Cc2cccc(c2)c3cscc3"                                                                  
5VB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1cc(cc(c1)c2ccsc2)CN3C=CCC3=O"                                                                
5VB SMILES           "OpenEye OEToolkits" 2.0.4 "c1cc(cc(c1)c2ccsc2)CN3C=CCC3=O"                                                                
# 
_pdbx_chem_comp_identifier.comp_id           5VB 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.4 
_pdbx_chem_comp_identifier.identifier        "1-[(3-thiophen-3-ylphenyl)methyl]-3~{H}-pyrrol-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5VB "Create component" 2015-12-07 RCSB 
5VB "Initial release"  2023-02-08 RCSB 
# 
