data_9IB
# 
_chem_comp.id                                    9IB 
_chem_comp.name                                  "3-[(5S,8R)-5-(dimethylcarbamoyl)-8-[[(2S)-1-ethanoylpyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(16),12,14-trien-16-yl]benzoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H34 N4 O8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-11-11 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        610.678 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9IB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q8R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9IB C1  C1  C 0 1 N N N -19.840 24.957 -28.487 -0.222 -4.009 -3.015 C1  9IB 1  
9IB C3  C2  C 0 1 N N N -19.066 25.604 -26.257 -0.447 -4.591 -0.555 C3  9IB 2  
9IB O5  O1  O 0 1 N N N -22.266 24.345 -27.446 -0.880 -1.507 -2.257 O5  9IB 3  
9IB C8  C3  C 0 1 N N N -23.258 24.867 -24.937 0.162  -1.691 0.843  C8  9IB 4  
9IB C10 C4  C 0 1 N N N -24.165 22.933 -22.970 1.984  0.474  1.082  C10 9IB 5  
9IB C11 C5  C 0 1 Y N N -24.671 22.592 -21.580 2.602  1.636  0.350  C11 9IB 6  
9IB C12 C6  C 0 1 Y N N -23.859 22.186 -20.487 1.771  2.582  -0.250 C12 9IB 7  
9IB C13 C7  C 0 1 Y N N -24.453 21.903 -19.247 2.332  3.656  -0.953 C13 9IB 8  
9IB C14 C8  C 0 1 Y N N -25.831 22.010 -19.058 3.701  3.791  -1.043 C14 9IB 9  
9IB C15 C9  C 0 1 Y N N -26.646 22.419 -20.107 4.525  2.861  -0.445 C15 9IB 10 
9IB C16 C10 C 0 1 Y N N -26.072 22.709 -21.347 3.982  1.776  0.248  C16 9IB 11 
9IB C19 C11 C 0 1 Y N N -28.138 24.912 -23.611 5.606  -0.525 2.746  C19 9IB 12 
9IB C20 C12 C 0 1 Y N N -28.842 23.950 -24.337 6.631  -1.069 1.998  C20 9IB 13 
9IB C21 C13 C 0 1 Y N N -28.625 22.591 -24.082 6.804  -0.689 0.665  C21 9IB 14 
9IB C22 C14 C 0 1 Y N N -27.724 22.180 -23.098 5.937  0.241  0.091  C22 9IB 15 
9IB O28 O2  O 0 1 N N N -21.668 22.605 -21.434 -0.459 2.870  -1.187 O28 9IB 16 
9IB C30 C15 C 0 1 N N R -19.729 22.425 -23.006 -2.432 1.656  -0.334 C30 9IB 17 
9IB C33 C16 C 0 1 N N N -19.238 21.322 -25.172 -4.661 0.789  0.144  C33 9IB 18 
9IB C35 C17 C 0 1 N N S -19.547 20.041 -25.892 -6.091 0.525  -0.252 C35 9IB 19 
9IB N2  N1  N 0 1 N N N -20.147 25.117 -27.091 -0.508 -3.605 -1.636 N2  9IB 20 
9IB C4  C18 C 0 1 N N N -21.430 24.773 -26.662 -0.829 -2.324 -1.362 C4  9IB 21 
9IB C6  C19 C 0 1 N N S -21.741 24.918 -25.190 -1.122 -1.910 0.048  C6  9IB 22 
9IB S9  S1  S 0 1 N N N -23.771 24.693 -23.176 1.347  -0.720 -0.129 S9  9IB 23 
9IB C17 C20 C 0 1 Y N N -27.023 23.142 -22.370 4.907  0.784  0.851  C17 9IB 24 
9IB C18 C21 C 0 1 Y N N -27.238 24.502 -22.628 4.746  0.397  2.181  C18 9IB 25 
9IB C23 C22 C 0 1 N N N -29.367 21.564 -24.850 7.901  -1.271 -0.135 C23 9IB 26 
9IB O24 O3  O 0 1 N N N -30.050 21.800 -25.836 8.050  -0.940 -1.294 O24 9IB 27 
9IB O25 O4  O 0 1 N N N -29.203 20.345 -24.263 8.737  -2.169 0.422  O25 9IB 28 
9IB C26 C23 C 0 1 N N N -22.384 22.009 -20.447 0.298  2.495  -0.152 C26 9IB 29 
9IB O27 O5  O 0 1 N N N -21.870 21.385 -19.533 -0.210 2.122  0.889  O27 9IB 30 
9IB C29 C24 C 0 1 N N N -20.348 22.059 -21.654 -1.895 2.835  -1.135 C29 9IB 31 
9IB N32 N2  N 0 1 N N N -19.913 21.355 -23.969 -3.825 1.400  -0.719 N32 9IB 32 
9IB O34 O6  O 0 1 N N N -18.503 22.197 -25.629 -4.262 0.450  1.238  O34 9IB 33 
9IB C37 C25 C 0 1 N N N -18.289 19.169 -25.886 -6.942 1.810  -0.086 C37 9IB 34 
9IB C38 C26 C 0 1 N N N -17.591 19.529 -27.196 -8.366 1.220  0.090  C38 9IB 35 
9IB C39 C27 C 0 1 N N N -18.739 19.801 -28.156 -8.108 -0.076 0.888  C39 9IB 36 
9IB N40 N3  N 0 1 N N N -19.746 20.435 -27.291 -6.705 -0.454 0.663  N40 9IB 37 
9IB C41 C28 C 0 1 N N N -20.921 21.043 -27.724 -6.083 -1.521 1.204  C41 9IB 38 
9IB O42 O7  O 0 1 N N N -21.878 21.276 -26.997 -4.918 -1.738 0.947  O42 9IB 39 
9IB C43 C29 C 0 1 N N N -20.938 21.440 -29.175 -6.835 -2.444 2.127  C43 9IB 40 
9IB C44 C30 C 0 1 N N N -20.310 23.772 -23.450 -1.619 0.406  -0.587 C44 9IB 41 
9IB O45 O8  O 0 1 N N N -20.165 24.758 -22.746 -0.719 0.434  -1.396 O45 9IB 42 
9IB N46 N4  N 0 1 N N N -21.046 23.772 -24.634 -1.974 -0.706 0.130  N46 9IB 43 
9IB H1  H1  H 0 1 N N N -18.801 25.266 -28.672 0.844  -3.891 -3.214 H1  9IB 44 
9IB H2  H2  H 0 1 N N N -19.965 23.902 -28.771 -0.504 -5.053 -3.153 H2  9IB 45 
9IB H3  H3  H 0 1 N N N -20.520 25.581 -29.086 -0.791 -3.384 -3.703 H3  9IB 46 
9IB H4  H4  H 0 1 N N N -19.413 25.687 -25.217 0.562  -4.618 -0.145 H4  9IB 47 
9IB H5  H5  H 0 1 N N N -18.220 24.902 -26.306 -1.151 -4.315 0.229  H5  9IB 48 
9IB H6  H6  H 0 1 N N N -18.744 26.593 -26.615 -0.706 -5.575 -0.947 H6  9IB 49 
9IB H7  H7  H 0 1 N N N -23.697 25.798 -25.326 -0.068 -1.160 1.769  H7  9IB 50 
9IB H8  H8  H 0 1 N N N -23.664 24.010 -25.493 0.603  -2.658 1.090  H8  9IB 51 
9IB H9  H9  H 0 1 N N N -24.941 22.661 -23.701 2.695  -0.015 1.737  H9  9IB 52 
9IB H10 H10 H 0 1 N N N -23.255 22.346 -23.165 1.155  0.835  1.699  H10 9IB 53 
9IB H11 H11 H 0 1 N N N -23.829 21.596 -18.421 1.686  4.379  -1.429 H11 9IB 54 
9IB H12 H12 H 0 1 N N N -26.264 21.775 -18.097 4.126  4.625  -1.583 H12 9IB 55 
9IB H13 H13 H 0 1 N N N -27.713 22.512 -19.965 5.599  2.968  -0.510 H13 9IB 56 
9IB H14 H14 H 0 1 N N N -28.289 25.963 -23.809 5.473  -0.824 3.775  H14 9IB 57 
9IB H15 H15 H 0 1 N N N -29.552 24.253 -25.093 7.300  -1.789 2.445  H15 9IB 58 
9IB H16 H16 H 0 1 N N N -27.571 21.129 -22.902 6.066  0.539  -0.939 H16 9IB 59 
9IB H17 H17 H 0 1 N N N -18.650 22.568 -22.847 -2.400 1.891  0.731  H17 9IB 60 
9IB H18 H18 H 0 1 N N N -20.415 19.517 -25.465 -6.140 0.168  -1.281 H18 9IB 61 
9IB H19 H19 H 0 1 N N N -21.327 25.861 -24.803 -1.673 -2.743 0.531  H19 9IB 62 
9IB H20 H20 H 0 1 N N N -26.699 25.244 -22.057 3.943  0.816  2.770  H20 9IB 63 
9IB H21 H21 H 0 1 N N N -29.705 19.694 -24.739 9.440  -2.522 -0.141 H21 9IB 64 
9IB H22 H22 H 0 1 N N N -20.414 20.963 -21.592 -2.266 3.767  -0.691 H22 9IB 65 
9IB H23 H23 H 0 1 N N N -19.685 22.432 -20.860 -2.293 2.777  -2.157 H23 9IB 66 
9IB H24 H24 H 0 1 N N N -20.551 20.616 -23.753 -4.144 1.670  -1.594 H24 9IB 67 
9IB H25 H25 H 0 1 N N N -18.552 18.101 -25.863 -6.638 2.368  0.800  H25 9IB 68 
9IB H26 H26 H 0 1 N N N -17.650 19.408 -25.023 -6.884 2.434  -0.977 H26 9IB 69 
9IB H27 H27 H 0 1 N N N -16.972 18.693 -27.553 -8.999 1.902  0.657  H27 9IB 70 
9IB H28 H28 H 0 1 N N N -16.963 20.424 -27.072 -8.813 0.996  -0.879 H28 9IB 71 
9IB H29 H29 H 0 1 N N N -19.122 18.866 -28.590 -8.278 0.103  1.949  H29 9IB 72 
9IB H30 H30 H 0 1 N N N -18.427 20.479 -28.964 -8.767 -0.868 0.533  H30 9IB 73 
9IB H31 H31 H 0 1 N N N -21.894 21.931 -29.410 -7.301 -3.240 1.546  H31 9IB 74 
9IB H32 H32 H 0 1 N N N -20.110 22.136 -29.374 -6.144 -2.878 2.849  H32 9IB 75 
9IB H33 H33 H 0 1 N N N -20.822 20.543 -29.802 -7.606 -1.881 2.655  H33 9IB 76 
9IB H34 H34 H 0 1 N N N -21.099 22.912 -25.142 -2.784 -0.696 0.693  H34 9IB 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9IB C43 C41 SING N N 1  
9IB C1  N2  SING N N 2  
9IB C39 N40 SING N N 3  
9IB C39 C38 SING N N 4  
9IB C41 N40 SING N N 5  
9IB C41 O42 DOUB N N 6  
9IB O5  C4  DOUB N N 7  
9IB N40 C35 SING N N 8  
9IB C38 C37 SING N N 9  
9IB N2  C4  SING N N 10 
9IB N2  C3  SING N N 11 
9IB C4  C6  SING N N 12 
9IB C35 C37 SING N N 13 
9IB C35 C33 SING N N 14 
9IB O24 C23 DOUB N N 15 
9IB O34 C33 DOUB N N 16 
9IB C6  C8  SING N N 17 
9IB C6  N46 SING N N 18 
9IB C33 N32 SING N N 19 
9IB C8  S9  SING N N 20 
9IB C23 O25 SING N N 21 
9IB C23 C21 SING N N 22 
9IB N46 C44 SING N N 23 
9IB C20 C21 DOUB Y N 24 
9IB C20 C19 SING Y N 25 
9IB C21 C22 SING Y N 26 
9IB N32 C30 SING N N 27 
9IB C19 C18 DOUB Y N 28 
9IB C44 C30 SING N N 29 
9IB C44 O45 DOUB N N 30 
9IB S9  C10 SING N N 31 
9IB C22 C17 DOUB Y N 32 
9IB C30 C29 SING N N 33 
9IB C10 C11 SING N N 34 
9IB C18 C17 SING Y N 35 
9IB C17 C16 SING N N 36 
9IB C29 O28 SING N N 37 
9IB C11 C16 DOUB Y N 38 
9IB C11 C12 SING Y N 39 
9IB O28 C26 SING N N 40 
9IB C16 C15 SING Y N 41 
9IB C12 C26 SING N N 42 
9IB C12 C13 DOUB Y N 43 
9IB C26 O27 DOUB N N 44 
9IB C15 C14 DOUB Y N 45 
9IB C13 C14 SING Y N 46 
9IB C1  H1  SING N N 47 
9IB C1  H2  SING N N 48 
9IB C1  H3  SING N N 49 
9IB C3  H4  SING N N 50 
9IB C3  H5  SING N N 51 
9IB C3  H6  SING N N 52 
9IB C8  H7  SING N N 53 
9IB C8  H8  SING N N 54 
9IB C10 H9  SING N N 55 
9IB C10 H10 SING N N 56 
9IB C13 H11 SING N N 57 
9IB C14 H12 SING N N 58 
9IB C15 H13 SING N N 59 
9IB C19 H14 SING N N 60 
9IB C20 H15 SING N N 61 
9IB C22 H16 SING N N 62 
9IB C30 H17 SING N N 63 
9IB C35 H18 SING N N 64 
9IB C6  H19 SING N N 65 
9IB C18 H20 SING N N 66 
9IB O25 H21 SING N N 67 
9IB C29 H22 SING N N 68 
9IB C29 H23 SING N N 69 
9IB N32 H24 SING N N 70 
9IB C37 H25 SING N N 71 
9IB C37 H26 SING N N 72 
9IB C38 H27 SING N N 73 
9IB C38 H28 SING N N 74 
9IB C39 H29 SING N N 75 
9IB C39 H30 SING N N 76 
9IB C43 H31 SING N N 77 
9IB C43 H32 SING N N 78 
9IB C43 H33 SING N N 79 
9IB N46 H34 SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9IB InChI            InChI                1.06  "InChI=1S/C30H34N4O8S/c1-17(35)34-12-6-11-25(34)27(37)31-23-14-42-30(41)21-10-5-9-20(18-7-4-8-19(13-18)29(39)40)22(21)15-43-16-24(32-26(23)36)28(38)33(2)3/h4-5,7-10,13,23-25H,6,11-12,14-16H2,1-3H3,(H,31,37)(H,32,36)(H,39,40)/t23-,24-,25+/m1/s1" 
9IB InChIKey         InChI                1.06  UPESAAPZKADZIE-SDHSZQHLSA-N                                                                                                                                                                                                                          
9IB SMILES_CANONICAL CACTVS               3.385 "CN(C)C(=O)[C@H]1CSCc2c(cccc2c3cccc(c3)C(O)=O)C(=O)OC[C@@H](NC(=O)[C@@H]4CCCN4C(C)=O)C(=O)N1"                                                                                                                                                        
9IB SMILES           CACTVS               3.385 "CN(C)C(=O)[CH]1CSCc2c(cccc2c3cccc(c3)C(O)=O)C(=O)OC[CH](NC(=O)[CH]4CCCN4C(C)=O)C(=O)N1"                                                                                                                                                             
9IB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3cccc(c3CSC[C@@H](NC2=O)C(=O)N(C)C)c4cccc(c4)C(=O)O"                                                                                                                                                          
9IB SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCCC1C(=O)NC2COC(=O)c3cccc(c3CSCC(NC2=O)C(=O)N(C)C)c4cccc(c4)C(=O)O"                                                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           9IB 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[(5~{S},8~{R})-5-(dimethylcarbamoyl)-8-[[(2~{S})-1-ethanoylpyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(16),12,14-trien-16-yl]benzoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9IB "Create component"  2021-11-11 PDBE 
9IB "Initial release"   2022-03-16 RCSB 
9IB "Modify descriptor" 2022-08-22 RCSB 
# 
