data_A1BKB
# 
_chem_comp.id                                    A1BKB 
_chem_comp.name                                  "1-{[(7-bromo-9H-pyrimido[4,5-b]indol-4-yl)amino]methyl}cyclopropane-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H14 Br N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-12-09 
_chem_comp.pdbx_modified_date                    2025-08-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        360.209 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1BKB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7HPS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1BKB C9   C1  C  0 1 Y N N N N N -43.914 -29.299 5.915 2.137  3.803  0.097  C9   A1BKB 1  
A1BKB C14  C2  C  0 1 Y N N N N N -49.678 -29.094 6.506 -3.027 0.943  0.057  C14  A1BKB 2  
A1BKB C17  C3  C  0 1 Y N N N N N -50.158 -29.308 4.138 -1.995 -1.214 -0.179 C17  A1BKB 3  
A1BKB C19  C4  C  0 1 Y N N N N N -47.867 -29.219 4.869 -0.625 0.750  -0.061 C19  A1BKB 4  
A1BKB C11  C5  C  0 1 Y N N N N N -46.092 -29.118 6.315 -0.008 2.964  0.112  C11  A1BKB 5  
A1BKB C13  C6  C  0 1 Y N N N N N -48.325 -29.107 6.196 -1.774 1.548  0.059  C13  A1BKB 6  
A1BKB C15  C7  C  0 1 Y N N N N N -50.572 -29.200 5.457 -3.132 -0.427 -0.062 C15  A1BKB 7  
A1BKB C18  C8  C  0 1 Y N N N N N -48.804 -29.319 3.844 -0.746 -0.633 -0.180 C18  A1BKB 8  
A1BKB C2   C9  C  0 1 N N N N N N -45.121 -32.205 1.355 3.712  -2.211 0.795  C2   A1BKB 9  
A1BKB C20  C10 C  0 1 Y N N N N N -46.415 -29.227 4.938 0.521  1.672  -0.027 C20  A1BKB 10 
A1BKB C21  C11 C  0 1 N N N N N N -42.840 -31.767 2.445 5.684  -1.748 -0.830 C21  A1BKB 11 
A1BKB C22  C12 C  0 1 N N N N N N -42.680 -31.522 0.968 4.448  -2.025 -1.688 C22  A1BKB 12 
A1BKB C4   C13 C  0 1 N N N N N N -43.995 -31.214 1.644 4.294  -1.371 -0.313 C4   A1BKB 13 
A1BKB C5   C14 C  0 1 N N N N N N -44.340 -29.742 1.851 3.933  0.115  -0.273 C5   A1BKB 14 
A1BKB C7   C15 C  0 1 Y N N N N N -45.297 -29.389 4.081 1.910  1.518  -0.110 C7   A1BKB 15 
A1BKB N1   N1  N  0 1 N N N N N N -46.256 -31.715 0.879 3.661  -1.727 2.052  N1   A1BKB 16 
A1BKB N10  N2  N  0 1 Y N N N N N -44.861 -29.144 6.844 0.837  3.993  0.169  N10  A1BKB 17 
A1BKB N12  N3  N  0 1 Y N N N N N -47.239 -29.046 7.052 -1.377 2.870  0.161  N12  A1BKB 18 
A1BKB N6   N4  N  0 1 N N N N N N -45.450 -29.518 2.752 2.476  0.263  -0.253 N6   A1BKB 19 
A1BKB N8   N5  N  0 1 Y N N N N N -44.053 -29.420 4.591 2.674  2.605  -0.039 N8   A1BKB 20 
A1BKB O3   O1  O  0 1 N N N N N N -44.962 -33.407 1.559 3.290  -3.322 0.556  O3   A1BKB 21 
A1BKB BR16 BR1 BR 0 0 N N N N N N -52.431 -29.267 5.845 -4.840 -1.240 -0.065 BR16 A1BKB 22 
A1BKB H9   H1  H  0 1 N N N N N N -42.899 -29.331 6.283 2.791  4.661  0.147  H9   A1BKB 23 
A1BKB H14  H2  H  0 1 N N N N N N -50.019 -29.005 7.527 -3.917 1.546  0.150  H14  A1BKB 24 
A1BKB H17  H3  H  0 1 N N N N N N -50.887 -29.383 3.344 -2.090 -2.286 -0.272 H17  A1BKB 25 
A1BKB H18  H4  H  0 1 N N N N N N -48.475 -29.405 2.819 0.137  -1.247 -0.272 H18  A1BKB 26 
A1BKB H21B H5  H  0 0 N N N N N N -42.881 -32.797 2.830 6.178  -2.603 -0.368 H21B A1BKB 27 
A1BKB H21A H6  H  0 0 N N N N N N -42.316 -31.125 3.169 6.342  -0.937 -1.141 H21A A1BKB 28 
A1BKB H22B H7  H  0 0 N N N N N N -42.604 -32.373 0.275 4.293  -1.396 -2.565 H22B A1BKB 29 
A1BKB H22A H8  H  0 0 N N N N N N -42.039 -30.702 0.613 4.129  -3.062 -1.791 H22A A1BKB 30 
A1BKB H5B  H9  H  0 1 N N N N N N -43.455 -29.234 2.260 4.357  0.568  0.623  H5B  A1BKB 31 
A1BKB H5A  H10 H  0 1 N N N N N N -44.594 -29.306 0.874 4.336  0.610  -1.157 H5A  A1BKB 32 
A1BKB H1B  H11 H  0 1 N N N N N N -47.018 -32.329 0.674 3.354  -2.292 2.778  H1B  A1BKB 33 
A1BKB H1A  H12 H  0 1 N N N N N N -46.350 -30.731 0.725 3.932  -0.813 2.231  H1A  A1BKB 34 
A1BKB H12  H13 H  0 1 N N N N N N -47.287 -28.963 8.047 -1.981 3.624  0.255  H12  A1BKB 35 
A1BKB H6   H14 H  0 1 N N N N N N -45.891 -28.676 2.442 1.907  -0.518 -0.339 H6   A1BKB 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1BKB N1  C2   SING N N 1  
A1BKB C22 C4   SING N N 2  
A1BKB C22 C21  SING N N 3  
A1BKB C2  O3   DOUB N N 4  
A1BKB C2  C4   SING N N 5  
A1BKB C4  C5   SING N N 6  
A1BKB C4  C21  SING N N 7  
A1BKB C5  N6   SING N N 8  
A1BKB N6  C7   SING N N 9  
A1BKB C18 C17  DOUB Y N 10 
A1BKB C18 C19  SING Y N 11 
A1BKB C7  N8   DOUB Y N 12 
A1BKB C7  C20  SING Y N 13 
A1BKB C17 C15  SING Y N 14 
A1BKB N8  C9   SING Y N 15 
A1BKB C19 C20  SING Y N 16 
A1BKB C19 C13  DOUB Y N 17 
A1BKB C20 C11  DOUB Y N 18 
A1BKB C15 BR16 SING N N 19 
A1BKB C15 C14  DOUB Y N 20 
A1BKB C9  N10  DOUB Y N 21 
A1BKB C13 C14  SING Y N 22 
A1BKB C13 N12  SING Y N 23 
A1BKB C11 N10  SING Y N 24 
A1BKB C11 N12  SING Y N 25 
A1BKB C9  H9   SING N N 26 
A1BKB C14 H14  SING N N 27 
A1BKB C17 H17  SING N N 28 
A1BKB C18 H18  SING N N 29 
A1BKB C21 H21B SING N N 30 
A1BKB C21 H21A SING N N 31 
A1BKB C22 H22B SING N N 32 
A1BKB C22 H22A SING N N 33 
A1BKB C5  H5B  SING N N 34 
A1BKB C5  H5A  SING N N 35 
A1BKB N1  H1B  SING N N 36 
A1BKB N1  H1A  SING N N 37 
A1BKB N12 H12  SING N N 38 
A1BKB N6  H6   SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1BKB SMILES           ACDLabs              14.52   "NC(=O)C1(CC1)CNc1ncnc2[NH]c3cc(Br)ccc3c12"                                                                                             
A1BKB InChI            InChI                1.06    "InChI=1S/C15H14BrN5O/c16-8-1-2-9-10(5-8)21-13-11(9)12(19-7-20-13)18-6-15(3-4-15)14(17)22/h1-2,5,7H,3-4,6H2,(H2,17,22)(H2,18,19,20,21)" 
A1BKB InChIKey         InChI                1.06    YLNJPEGUTGFJHW-UHFFFAOYSA-N                                                                                                             
A1BKB SMILES_CANONICAL CACTVS               3.385   "NC(=O)C1(CC1)CNc2ncnc3[nH]c4cc(Br)ccc4c23"                                                                                             
A1BKB SMILES           CACTVS               3.385   "NC(=O)C1(CC1)CNc2ncnc3[nH]c4cc(Br)ccc4c23"                                                                                             
A1BKB SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1Br)[nH]c3c2c(ncn3)NCC4(CC4)C(=O)N"                                                                                           
A1BKB SMILES           "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1Br)[nH]c3c2c(ncn3)NCC4(CC4)C(=O)N"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1BKB "SYSTEMATIC NAME" ACDLabs              14.52   "1-{[(7-bromo-9H-pyrimido[4,5-b]indol-4-yl)amino]methyl}cyclopropane-1-carboxamide"       
A1BKB "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[[(7-bromanyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]methyl]cyclopropane-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1BKB "Create component" 2024-12-09 RCSB 
A1BKB "Initial release"  2025-08-20 RCSB 
# 
