data_AFB
#

_chem_comp.id                                   AFB
_chem_comp.name                                 "1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H24 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "BREFELDIN A"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-11-12
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       280.359
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AFB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1R8Q
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AFB  OC7   OC7   O  0  1  N  N  N  10.099  6.854  32.082   1.430  -0.642  -5.223  OC7   AFB   1  
AFB  C7    C7    C  0  1  N  N  S   8.747  7.236  31.946   1.081  -1.935  -4.742  C7    AFB   2  
AFB  C8    C8    C  0  1  N  N  N   7.958  6.166  31.239   2.160  -2.474  -3.808  C8    AFB   3  
AFB  C6    C6    C  0  1  N  N  N   8.070  7.302  33.334  -0.167  -1.875  -3.877  C6    AFB   4  
AFB  C5    C5    C  0  1  N  N  R   6.534  7.077  33.029   0.364  -1.361  -2.530  C5    AFB   5  
AFB  C9    C9    C  0  1  N  N  S   6.504  6.671  31.558   1.730  -2.082  -2.376  C9    AFB   6  
AFB  C10   C10   C  0  1  N  N  N   5.502  5.526  31.339   2.779  -1.230  -1.704  C10   AFB   7  
AFB  C11   C11   C  0  1  N  N  N   4.501  5.623  30.367   3.489  -1.615  -0.632  C11   AFB   8  
AFB  C12   C12   C  0  1  N  N  N   3.578  4.504  30.147   4.555  -0.773   0.014  C12   AFB   9  
AFB  C13   C13   C  0  1  N  N  N   2.108  4.840  30.615   4.204  -0.334   1.441  C13   AFB  10  
AFB  C14   C14   C  0  1  N  N  N   1.515  6.055  29.870   4.263  -1.468   2.483  C14   AFB  11  
AFB  C15   C15   C  0  1  N  N  S   0.844  7.049  30.891   2.972  -1.595   3.307  C15   AFB  12  
AFB  C16   C16   C  0  1  N  N  N   0.163  8.100  29.963   3.137  -2.612   4.429  C16   AFB  13  
AFB  O16   O16   O  0  1  N  N  N   1.998  7.729  31.393   1.937  -2.090   2.432  O16   AFB  14  
AFB  C1    C1    C  0  1  N  N  N   1.965  8.146  32.673   0.923  -1.254   2.092  C1    AFB  15  
AFB  OC1   OC1   O  0  1  N  N  N   0.872  8.322  33.211   0.663  -0.159   2.560  OC1   AFB  16  
AFB  C2    C2    C  0  1  N  N  N   3.188  8.477  33.315   0.247  -1.873   0.937  C2    AFB  17  
AFB  C3    C3    C  0  1  N  N  N   4.345  8.214  32.606  -0.125  -1.078  -0.074  C3    AFB  18  
AFB  C4    C4    C  0  1  N  N  R   5.787  8.438  33.152  -0.635  -1.609  -1.383  C4    AFB  19  
AFB  OC4   OC4   O  0  1  N  N  N   5.736  8.832  34.544  -1.860  -0.943  -1.691  OC4   AFB  20  
AFB  HO7   HO7   H  0  1  N  N  N  10.597  7.529  32.528   1.987  -0.777  -6.006  HO7   AFB  21  
AFB  HC7   HC7   H  0  1  N  N  N   8.751  8.209  31.402   0.939  -2.580  -5.614  HC7   AFB  22  
AFB  H81   1H8   H  0  1  N  N  N   8.198  6.009  30.161   3.156  -2.103  -4.075  H81   AFB  23  
AFB  H82   2H8   H  0  1  N  N  N   8.187  5.114  31.529   2.184  -3.569  -3.874  H82   AFB  24  
AFB  H61   1H6   H  0  1  N  N  N   8.495  6.594  34.083  -0.601  -2.876  -3.765  H61   AFB  25  
AFB  H62   2H6   H  0  1  N  N  N   8.290  8.233  33.906  -0.925  -1.201  -4.289  H62   AFB  26  
AFB  H5    H5    H  0  1  N  N  N   6.066  6.333  33.715   0.515  -0.276  -2.627  H5    AFB  27  
AFB  H9    H9    H  0  1  N  N  N   6.193  7.518  30.903   1.590  -3.011  -1.805  H9    AFB  28  
AFB  H101  1H10  H  0  0  N  N  N   5.501  4.582  31.910   2.967  -0.251  -2.139  H101  AFB  29  
AFB  H111  1H11  H  0  0  N  N  N   4.440  6.559  29.787   3.314  -2.599  -0.204  H111  AFB  30  
AFB  H121  1H12  H  0  0  N  N  N   3.595  4.170  29.083   5.498  -1.333   0.016  H121  AFB  31  
AFB  H122  2H12  H  0  0  N  N  N   3.952  3.572  30.631   4.733   0.127  -0.587  H122  AFB  32  
AFB  H131  1H13  H  0  0  N  N  N   1.443  3.949  30.522   4.932   0.431   1.742  H131  AFB  33  
AFB  H132  2H13  H  0  0  N  N  N   2.061  4.984  31.719   3.231   0.168   1.443  H132  AFB  34  
AFB  H141  1H14  H  0  0  N  N  N   2.275  6.564  29.233   4.476  -2.425   1.991  H141  AFB  35  
AFB  H142  2H14  H  0  0  N  N  N   0.807  5.744  29.065   5.103  -1.268   3.160  H142  AFB  36  
AFB  H15   H15   H  0  1  N  N  N   0.163  6.605  31.654   2.705  -0.625   3.743  H15   AFB  37  
AFB  H161  1H16  H  0  0  N  N  N  -0.312  8.803  30.685   3.741  -2.195   5.240  H161  AFB  38  
AFB  H162  2H16  H  0  0  N  N  N   0.846  8.581  29.225   2.162  -2.895   4.837  H162  AFB  39  
AFB  H163  3H16  H  0  0  N  N  N  -0.533  7.669  29.206   3.632  -3.515   4.060  H163  AFB  40  
AFB  H21   1H2   H  0  1  N  N  N   3.237  8.920  34.323   0.194  -2.953   0.873  H21   AFB  41  
AFB  H31   1H3   H  0  1  N  N  N   4.116  7.823  31.600  -0.000  -0.000   0.000  H31   AFB  42  
AFB  HC4   HC4   H  0  1  N  N  N   6.306  9.241  32.579  -0.858  -2.681  -1.313  HC4   AFB  43  
AFB  HO4   HO4   H  0  1  N  N  N   5.280  9.662  34.619  -1.798  -0.671  -2.619  HO4   AFB  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AFB  OC7  C7    SING  N  N   1  
AFB  OC7  HO7   SING  N  N   2  
AFB  C7   C8    SING  N  N   3  
AFB  C7   C6    SING  N  N   4  
AFB  C7   HC7   SING  N  N   5  
AFB  C8   C9    SING  N  N   6  
AFB  C8   H81   SING  N  N   7  
AFB  C8   H82   SING  N  N   8  
AFB  C6   C5    SING  N  N   9  
AFB  C6   H61   SING  N  N  10  
AFB  C6   H62   SING  N  N  11  
AFB  C5   C9    SING  N  N  12  
AFB  C5   C4    SING  N  N  13  
AFB  C5   H5    SING  N  N  14  
AFB  C9   C10   SING  N  N  15  
AFB  C9   H9    SING  N  N  16  
AFB  C10  C11   DOUB  N  E  17  
AFB  C10  H101  SING  N  N  18  
AFB  C11  C12   SING  N  N  19  
AFB  C11  H111  SING  N  N  20  
AFB  C12  C13   SING  N  N  21  
AFB  C12  H121  SING  N  N  22  
AFB  C12  H122  SING  N  N  23  
AFB  C13  C14   SING  N  N  24  
AFB  C13  H131  SING  N  N  25  
AFB  C13  H132  SING  N  N  26  
AFB  C14  C15   SING  N  N  27  
AFB  C14  H141  SING  N  N  28  
AFB  C14  H142  SING  N  N  29  
AFB  C15  C16   SING  N  N  30  
AFB  C15  O16   SING  N  N  31  
AFB  C15  H15   SING  N  N  32  
AFB  C16  H161  SING  N  N  33  
AFB  C16  H162  SING  N  N  34  
AFB  C16  H163  SING  N  N  35  
AFB  O16  C1    SING  N  N  36  
AFB  C1   OC1   DOUB  N  N  37  
AFB  C1   C2    SING  N  N  38  
AFB  C2   C3    DOUB  N  E  39  
AFB  C2   H21   SING  N  N  40  
AFB  C3   C4    SING  N  N  41  
AFB  C3   H31   SING  N  N  42  
AFB  C4   OC4   SING  N  N  43  
AFB  C4   HC4   SING  N  N  44  
AFB  OC4  HO4   SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AFB  SMILES            ACDLabs               10.04  "O=C1OC(CCCC=CC2C(C(O)C=C1)CC(O)C2)C"  
AFB  SMILES_CANONICAL  CACTVS                3.341  "C[C@H]1CCC/C=C/[C@@H]2C[C@H](O)C[C@H]2[C@H](O)/C=C/C(=O)O1"  
AFB  SMILES            CACTVS                3.341  "C[CH]1CCCC=C[CH]2C[CH](O)C[CH]2[CH](O)C=CC(=O)O1"  
AFB  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H]1CCC\C=C\[C@@H]2C[C@@H](C[C@H]2[C@@H](\C=C\C(=O)O1)O)O"  
AFB  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1CCCC=CC2CC(CC2C(C=CC(=O)O1)O)O"  
AFB  InChI             InChI                 1.03   "InChI=1S/C16H24O4/c1-11-5-3-2-4-6-12-9-13(17)10-14(12)15(18)7-8-16(19)20-11/h4,6-8,11-15,17-18H,2-3,5,9-10H2,1H3/b6-4+,8-7+/t11-,12+,13-,14+,15+/m0/s1"  
AFB  InChIKey          InChI                 1.03   KQNZDYYTLMIZCT-KQPMLPITSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AFB  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1R,2E,6S,10E,11aS,13S,14aR)-1,13-dihydroxy-6-methyl-1,6,7,8,9,11a,12,13,14,14a-decahydro-4H-cyclopenta[f]oxacyclotridecin-4-one"  
AFB  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1R,2R,3E,7S,11E,13S,15S)-2,15-dihydroxy-7-methyl-6-oxabicyclo[11.3.0]hexadeca-3,11-dien-5-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AFB  "Create component"   2003-11-12  RCSB  
AFB  "Modify descriptor"  2011-06-04  RCSB  
AFB  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     AFB
_pdbx_chem_comp_synonyms.name        "BREFELDIN A"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
