data_LSB
# 
_chem_comp.id                                    LSB 
_chem_comp.name                                  "(4R,5S)-3-((2R,3S,4S)-2-ethyl-5-((2R,3R)-2-ethyl-3-(2-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)ethyl)oxiran-2-yl)-3-hydroxy-4-methylpentanoyl)-4-methyl-5-phenyloxazolidin-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H43 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(4R,5S)-3-[(2R,3S,4S)-2-ethyl-5-[(3R)-2-ethyl-3-[2-[(2R,3R)-2-ethyl-3-methyl-oxiran-2-yl]ethyl]oxiran-2-yl]-3-hydroxy-4-methyl-pentanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-13 
_chem_comp.pdbx_modified_date                    2024-02-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        501.655 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LSB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RGA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LSB C1   C1   C 0 1 Y N N N N N 60.120 54.674 10.302 -6.498 -0.181 -0.811 C1   LSB 1  
LSB C2   C2   C 0 1 Y N N N N N 60.079 56.048 10.582 -7.853 0.011  -0.611 C2   LSB 2  
LSB C3   C3   C 0 1 Y N N N N N 60.606 56.584 11.762 -8.752 -0.974 -0.975 C3   LSB 3  
LSB C4   C4   C 0 1 Y N N N N N 61.213 55.735 12.663 -8.296 -2.150 -1.540 C4   LSB 4  
LSB C5   C5   C 0 1 Y N N N N N 61.275 54.370 12.398 -6.942 -2.342 -1.741 C5   LSB 5  
LSB C6   C6   C 0 1 Y N N N N N 60.739 53.834 11.225 -6.043 -1.358 -1.375 C6   LSB 6  
LSB C7   C7   C 0 1 N N N N N N 58.164 51.850 9.477  -5.407 -0.757 1.485  C7   LSB 7  
LSB C8   C8   C 0 1 N N R N N N 58.233 53.292 8.915  -4.868 0.566  0.937  C8   LSB 8  
LSB C9   C9   C 0 1 N N S N N N 59.555 54.141 9.012  -5.519 0.896  -0.420 C9   LSB 9  
LSB O10  O10  O 0 1 N N N N N N 59.163 55.346 8.359  -4.398 0.928  -1.350 O10  LSB 10 
LSB C11  C11  C 0 1 N N N N N N 57.713 55.408 8.659  -3.264 0.668  -0.691 C11  LSB 11 
LSB N12  N12  N 0 1 N N N N N N 57.307 54.352 9.387  -3.436 0.448  0.620  N12  LSB 12 
LSB C13  C13  C 0 1 N N N N N N 56.072 54.306 9.948  -2.458 0.166  1.503  C13  LSB 13 
LSB C14  C14  C 0 1 N N R N N N 55.442 52.939 10.143 -1.050 -0.068 1.018  C14  LSB 14 
LSB C15  C15  C 0 1 N N S N N N 55.055 52.571 11.562 -0.284 1.256  1.018  C15  LSB 15 
LSB C16  C16  C 0 1 N N S N N N 56.019 52.566 12.756 1.104  1.043  0.410  C16  LSB 16 
LSB C17  C17  C 0 1 N N N N N N 55.173 52.206 13.997 1.870  2.367  0.410  C17  LSB 17 
LSB C18  C18  C 0 1 N N R N N N 54.399 50.870 13.935 3.292  2.133  -0.104 C18  LSB 18 
LSB C19  C19  C 0 1 N N R N N N 52.878 50.947 13.764 4.135  1.064  0.594  C19  LSB 19 
LSB C20  C20  C 0 1 N N N N N N 51.968 49.775 13.380 5.127  0.270  -0.259 C20  LSB 20 
LSB C21  C21  C 0 1 N N N N N N 50.507 50.239 13.595 5.773  -0.822 0.596  C21  LSB 21 
LSB C22  C22  C 0 1 N N R N N N 49.428 49.160 13.585 6.849  -1.540 -0.222 C22  LSB 22 
LSB C23  C23  C 0 1 N N R N N N 49.727 47.731 14.022 8.006  -0.702 -0.768 C23  LSB 23 
LSB C24  C24  C 0 1 N N N N N N 48.583 46.885 14.497 9.383  -1.363 -0.864 C24  LSB 24 
LSB O25  O25  O 0 1 N N N N N N 57.093 56.466 8.579  -2.176 0.633  -1.231 O25  LSB 25 
LSB O26  O26  O 0 1 N N N N N N 55.511 55.323 10.365 -2.711 0.101  2.687  O26  LSB 26 
LSB C27  C27  C 0 1 N N N N N N 54.223 52.590 9.251  -0.350 -1.062 1.947  C27  LSB 27 
LSB C28  C28  C 0 1 N N N N N N 53.630 53.695 8.428  -1.053 -2.419 1.864  C28  LSB 28 
LSB O29  O29  O 0 1 N N N N N N 54.784 51.187 11.343 -0.149 1.728  2.360  O29  LSB 29 
LSB C30  C30  C 0 1 N N N N N N 56.789 53.879 12.917 0.958  0.537  -1.027 C30  LSB 30 
LSB C31  C31  C 0 1 N N N N N N 55.123 49.532 13.789 3.496  2.334  -1.607 C31  LSB 31 
LSB C32  C32  C 0 1 N N N N N N 56.358 49.494 14.671 3.096  3.760  -1.990 C32  LSB 32 
LSB O33  O33  O 0 1 N N N N N N 53.489 50.809 15.072 4.377  2.462  0.766  O33  LSB 33 
LSB C34  C34  C 0 1 N N N N N N 47.953 49.592 13.599 7.147  -2.982 0.193  C34  LSB 34 
LSB C35  C35  C 0 1 N N N N N N 47.566 50.166 14.958 5.871  -3.819 0.081  C35  LSB 35 
LSB O36  O36  O 0 1 N N N N N N 49.696 48.109 12.635 6.965  -1.207 -1.607 O36  LSB 36 
LSB H2   H2   H 0 1 N N N N N N 59.626 56.714 9.863  -8.208 0.931  -0.170 H2   LSB 37 
LSB H3   H3   H 0 1 N N N N N N 60.539 57.643 11.963 -9.810 -0.824 -0.818 H3   LSB 38 
LSB H4   H4   H 0 1 N N N N N N 61.640 56.129 13.574 -8.999 -2.920 -1.824 H4   LSB 39 
LSB H5   H5   H 0 1 N N N N N N 61.747 53.713 13.113 -6.587 -3.262 -2.181 H5   LSB 40 
LSB H6   H6   H 0 1 N N N N N N 60.804 52.773 11.034 -4.985 -1.508 -1.531 H6   LSB 41 
LSB H7   H7   H 0 1 N N N N N N 57.158 51.438 9.308  -5.184 -1.559 0.782  H7   LSB 42 
LSB H7A  H7A  H 0 1 N N N N N N 58.908 51.221 8.966  -4.936 -0.972 2.444  H7A  LSB 43 
LSB H7B  H7B  H 0 1 N N N N N N 58.377 51.867 10.556 -6.486 -0.681 1.620  H7B  LSB 44 
LSB H8   H8   H 0 1 N N N N N N 58.005 52.863 7.928  -5.039 1.373  1.650  H8   LSB 45 
LSB H9   H9   H 0 1 N N N N N N 60.332 53.448 8.658  -6.014 1.866  -0.381 H9   LSB 46 
LSB H14  H14  H 0 1 N N N N N N 56.308 52.341 9.822  -1.077 -0.473 0.007  H14  LSB 47 
LSB H15  H15  H 0 1 N N N N N N 54.331 53.333 11.887 -0.830 1.992  0.428  H15  LSB 48 
LSB H16  H16  H 0 1 N N N N N N 56.815 51.823 12.601 1.650  0.307  1.001  H16  LSB 49 
LSB H17  H17  H 0 1 N N N N N N 55.860 52.145 14.854 1.362  3.080  -0.239 H17  LSB 50 
LSB H17A H17A H 0 0 N N N N N N 54.431 53.007 14.129 1.911  2.763  1.424  H17A LSB 51 
LSB H19  H19  H 0 1 N N N N N N 52.253 51.641 13.182 3.682  0.521  1.422  H19  LSB 52 
LSB H20  H20  H 0 1 N N N N N N 52.128 49.498 12.327 4.600  -0.188 -1.096 H20  LSB 53 
LSB H20A H20A H 0 0 N N N N N N 52.186 48.901 14.012 5.899  0.939  -0.637 H20A LSB 54 
LSB H21  H21  H 0 1 N N N N N N 50.466 50.727 14.580 6.227  -0.372 1.478  H21  LSB 55 
LSB H21A H21A H 0 0 N N N N N N 50.269 50.940 12.782 5.013  -1.540 0.905  H21A LSB 56 
LSB H23  H23  H 0 1 N N N N N N 50.448 47.263 14.709 8.009  0.366  -0.548 H23  LSB 57 
LSB H24  H24  H 0 1 N N N N N N 48.955 45.888 14.775 9.324  -2.231 -1.521 H24  LSB 58 
LSB H24A H24A H 0 0 N N N N N N 48.115 47.359 15.372 10.101 -0.650 -1.268 H24A LSB 59 
LSB H24B H24B H 0 0 N N N N N N 47.840 46.788 13.692 9.703  -1.680 0.129  H24B LSB 60 
LSB H27  H27  H 0 1 N N N N N N 54.553 51.810 8.549  0.691  -1.173 1.643  H27  LSB 61 
LSB H27A H27A H 0 0 N N N N N N 53.429 52.229 9.921  -0.392 -0.693 2.972  H27A LSB 62 
LSB H28  H28  H 0 1 N N N N N N 52.779 53.306 7.850  -2.112 -2.294 2.087  H28  LSB 63 
LSB H28A H28A H 0 0 N N N N N N 53.284 54.501 9.092  -0.938 -2.827 0.860  H28A LSB 64 
LSB H28B H28B H 0 0 N N N N N N 54.392 54.088 7.739  -0.608 -3.103 2.588  H28B LSB 65 
LSB HO29 HO29 H 0 0 N N N N N N 54.517 50.783 12.160 0.329  1.123  2.944  HO29 LSB 66 
LSB H30  H30  H 0 1 N N N N N N 57.458 53.808 13.787 1.943  0.299  -1.429 H30  LSB 67 
LSB H30A H30A H 0 0 N N N N N N 57.384 54.068 12.011 0.336  -0.358 -1.036 H30A LSB 68 
LSB H30B H30B H 0 0 N N N N N N 56.078 54.705 13.068 0.493  1.310  -1.639 H30B LSB 69 
LSB H31  H31  H 0 1 N N N N N N 54.443 48.720 14.087 4.544  2.171  -1.856 H31  LSB 70 
LSB H31A H31A H 0 0 N N N N N N 55.426 49.399 12.740 2.878  1.623  -2.156 H31A LSB 71 
LSB H32  H32  H 0 1 N N N N N N 56.864 48.525 14.552 3.342  3.937  -3.037 H32  LSB 72 
LSB H32A H32A H 0 0 N N N N N N 57.043 50.304 14.378 2.024  3.889  -1.841 H32A LSB 73 
LSB H32B H32B H 0 0 N N N N N N 56.062 49.626 15.722 3.638  4.470  -1.365 H32B LSB 74 
LSB H34  H34  H 0 1 N N N N N N 47.798 50.361 12.828 7.913  -3.398 -0.461 H34  LSB 75 
LSB H34A H34A H 0 0 N N N N N N 47.322 48.716 13.387 7.502  -2.998 1.224  H34A LSB 76 
LSB H35  H35  H 0 1 N N N N N N 46.508 50.467 14.942 6.074  -4.837 0.413  H35  LSB 77 
LSB H35A H35A H 0 0 N N N N N N 47.718 49.402 15.735 5.093  -3.381 0.706  H35A LSB 78 
LSB H35B H35B H 0 0 N N N N N N 48.193 51.043 15.178 5.537  -3.835 -0.957 H35B LSB 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LSB C1  C2   DOUB Y N 1  
LSB C1  C6   SING Y N 2  
LSB C1  C9   SING N N 3  
LSB C2  C3   SING Y N 4  
LSB C3  C4   DOUB Y N 5  
LSB C4  C5   SING Y N 6  
LSB C5  C6   DOUB Y N 7  
LSB C7  C8   SING N N 8  
LSB C8  C9   SING N N 9  
LSB C8  N12  SING N N 10 
LSB C9  O10  SING N N 11 
LSB O10 C11  SING N N 12 
LSB C11 N12  SING N N 13 
LSB C11 O25  DOUB N N 14 
LSB N12 C13  SING N N 15 
LSB C13 C14  SING N N 16 
LSB C13 O26  DOUB N N 17 
LSB C14 C15  SING N N 18 
LSB C14 C27  SING N N 19 
LSB C15 C16  SING N N 20 
LSB C15 O29  SING N N 21 
LSB C16 C17  SING N N 22 
LSB C16 C30  SING N N 23 
LSB C17 C18  SING N N 24 
LSB C18 C19  SING N N 25 
LSB C18 C31  SING N N 26 
LSB C18 O33  SING N N 27 
LSB C19 C20  SING N N 28 
LSB C19 O33  SING N N 29 
LSB C20 C21  SING N N 30 
LSB C21 C22  SING N N 31 
LSB C22 C23  SING N N 32 
LSB C22 C34  SING N N 33 
LSB C22 O36  SING N N 34 
LSB C23 C24  SING N N 35 
LSB C23 O36  SING N N 36 
LSB C27 C28  SING N N 37 
LSB C31 C32  SING N N 38 
LSB C34 C35  SING N N 39 
LSB C2  H2   SING N N 40 
LSB C3  H3   SING N N 41 
LSB C4  H4   SING N N 42 
LSB C5  H5   SING N N 43 
LSB C6  H6   SING N N 44 
LSB C7  H7   SING N N 45 
LSB C7  H7A  SING N N 46 
LSB C7  H7B  SING N N 47 
LSB C8  H8   SING N N 48 
LSB C9  H9   SING N N 49 
LSB C14 H14  SING N N 50 
LSB C15 H15  SING N N 51 
LSB C16 H16  SING N N 52 
LSB C17 H17  SING N N 53 
LSB C17 H17A SING N N 54 
LSB C19 H19  SING N N 55 
LSB C20 H20  SING N N 56 
LSB C20 H20A SING N N 57 
LSB C21 H21  SING N N 58 
LSB C21 H21A SING N N 59 
LSB C23 H23  SING N N 60 
LSB C24 H24  SING N N 61 
LSB C24 H24A SING N N 62 
LSB C24 H24B SING N N 63 
LSB C27 H27  SING N N 64 
LSB C27 H27A SING N N 65 
LSB C28 H28  SING N N 66 
LSB C28 H28A SING N N 67 
LSB C28 H28B SING N N 68 
LSB O29 HO29 SING N N 69 
LSB C30 H30  SING N N 70 
LSB C30 H30A SING N N 71 
LSB C30 H30B SING N N 72 
LSB C31 H31  SING N N 73 
LSB C31 H31A SING N N 74 
LSB C32 H32  SING N N 75 
LSB C32 H32A SING N N 76 
LSB C32 H32B SING N N 77 
LSB C34 H34  SING N N 78 
LSB C34 H34A SING N N 79 
LSB C35 H35  SING N N 80 
LSB C35 H35A SING N N 81 
LSB C35 H35B SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LSB SMILES           ACDLabs              12.01 "O=C2OC(c1ccccc1)C(N2C(=O)C(CC)C(O)C(C)CC4(OC4CCC3(OC3C)CC)CC)C"                                                                                                                                                         
LSB SMILES_CANONICAL CACTVS               3.370 "CC[C@H]([C@@H](O)[C@@H](C)C[C@@]1(CC)O[C@@H]1CC[C@@]2(CC)O[C@@H]2C)C(=O)N3[C@H](C)[C@@H](OC3=O)c4ccccc4"                                                                                                                
LSB SMILES           CACTVS               3.370 "CC[CH]([CH](O)[CH](C)C[C]1(CC)O[CH]1CC[C]2(CC)O[CH]2C)C(=O)N3[CH](C)[CH](OC3=O)c4ccccc4"                                                                                                                                
LSB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC[C@H]([C@H]([C@@H](C)CC1([C@H](O1)CC[C@@]2([C@H](O2)C)CC)CC)O)C(=O)N3[C@@H]([C@@H](OC3=O)c4ccccc4)C"                                                                                                                  
LSB SMILES           "OpenEye OEToolkits" 1.7.0 "CCC(C(C(C)CC1(C(O1)CCC2(C(O2)C)CC)CC)O)C(=O)N3C(C(OC3=O)c4ccccc4)C"                                                                                                                                                     
LSB InChI            InChI                1.03  "InChI=1S/C29H43NO6/c1-7-22(26(32)30-19(5)25(34-27(30)33)21-13-11-10-12-14-21)24(31)18(4)17-29(9-3)23(36-29)15-16-28(8-2)20(6)35-28/h10-14,18-20,22-25,31H,7-9,15-17H2,1-6H3/t18-,19+,20+,22+,23+,24-,25+,28+,29+/m0/s1" 
LSB InChIKey         InChI                1.03  PLMSSXURLNIBST-CWZDORBJSA-N                                                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LSB "SYSTEMATIC NAME" ACDLabs              12.01 "(4R,5S)-3-{(2R,3S,4S)-2-ethyl-5-[(2R,3R)-2-ethyl-3-{2-[(2R,3R)-2-ethyl-3-methyloxiran-2-yl]ethyl}oxiran-2-yl]-3-hydroxy-4-methylpentanoyl}-4-methyl-5-phenyl-1,3-oxazolidin-2-one (non-preferred name)" 
LSB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(4R,5S)-3-[(2R,3S,4S)-2-ethyl-5-[(3R)-2-ethyl-3-[2-[(2R,3R)-2-ethyl-3-methyl-oxiran-2-yl]ethyl]oxiran-2-yl]-3-hydroxy-4-methyl-pentanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one"                       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LSB "Create component"     2011-04-13 PDBJ 
LSB "Modify aromatic_flag" 2011-06-04 RCSB 
LSB "Modify descriptor"    2011-06-04 RCSB 
LSB "Modify name"          2024-01-18 PDBJ 
LSB "Modify name"          2024-02-19 PDBJ 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      LSB 
_pdbx_chem_comp_synonyms.name         "(4R,5S)-3-[(2R,3S,4S)-2-ethyl-5-[(3R)-2-ethyl-3-[2-[(2R,3R)-2-ethyl-3-methyl-oxiran-2-yl]ethyl]oxiran-2-yl]-3-hydroxy-4-methyl-pentanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
