data_TLB
# 
_chem_comp.id                                    TLB 
_chem_comp.name                                  "2'-O,3'-C-METHYLENE-ARABINOFURANOSYL-THYMINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C11 H15 N2 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-02-07 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        350.219 
_chem_comp.one_letter_code                       N 
_chem_comp.three_letter_code                     TLB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1OCI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TLB O2P    O2P  O 0 1 N N N 4.968  10.203 -3.343 1.159  4.891  1.708  O2P    TLB 1  
TLB P      P    P 0 1 N N N 5.197  8.811  -2.896 0.058  3.882  1.859  P      TLB 2  
TLB O1P    O1P  O 0 1 N N N 6.467  8.458  -2.222 -1.074 4.253  2.952  O1P    TLB 3  
TLB O3P    O3P  O 0 1 N Y N ?      ?      ?      -0.798 3.600  0.516  O3P    TLB 4  
TLB "O5'"  O5*  O 0 1 N N N 3.980  8.382  -1.926 0.542  2.401  2.294  "O5'"  TLB 5  
TLB "C5'"  C5*  C 0 1 N N N 2.652  8.799  -2.176 -0.440 1.390  2.458  "C5'"  TLB 6  
TLB "C4'"  C4*  C 0 1 N N R 1.631  8.060  -1.303 0.244  0.100  2.863  "C4'"  TLB 7  
TLB "O4'"  O4*  O 0 1 N N N 1.686  6.662  -1.520 -0.725 -0.943 3.024  "O4'"  TLB 8  
TLB "C3'"  C3*  C 0 1 N N R 1.688  8.290  0.221  1.247  -0.402 1.833  "C3'"  TLB 9  
TLB "O3'"  O3*  O 0 1 N N N 0.959  9.461  0.603  2.560  0.122  2.091  "O3'"  TLB 10 
TLB "C2'"  C2*  C 0 1 N N S 1.172  6.946  0.739  1.085  -1.922 1.889  "C2'"  TLB 11 
TLB "O2'"  O2*  O 0 1 N N N 2.371  6.722  1.458  0.565  -1.959 0.535  "O2'"  TLB 12 
TLB "C1'"  C1*  C 0 1 N N R 0.920  6.071  -0.489 0.023  -2.155 2.942  "C1'"  TLB 13 
TLB N1     N1   N 0 1 N N N 1.286  4.651  -0.263 -0.822 -3.239 2.541  N1     TLB 14 
TLB C2     C2   C 0 1 N N N 0.270  3.709  -0.081 -0.561 -4.568 2.951  C2     TLB 15 
TLB O2     O2   O 0 1 N N N -0.925 3.994  -0.057 0.389  -4.887 3.668  O2     TLB 16 
TLB N3     N3   N 0 1 N N N 0.681  2.392  0.073  -1.468 -5.526 2.484  N3     TLB 17 
TLB C4     C4   C 0 1 N N N 1.993  1.938  0.079  -2.573 -5.305 1.676  C4     TLB 18 
TLB O4     O4   O 0 1 N N N 2.218  0.736  0.203  -3.331 -6.196 1.302  O4     TLB 19 
TLB C5     C5   C 0 1 N N N 2.992  2.989  -0.075 -2.785 -3.886 1.284  C5     TLB 20 
TLB C5M    C5M  C 0 1 N N N 4.469  2.645  -0.059 -3.957 -3.566 0.412  C5M    TLB 21 
TLB C6     C6   C 0 1 N N N 2.609  4.283  -0.233 -1.920 -2.967 1.729  C6     TLB 22 
TLB "C9'"  C9*  C 0 1 N N N 2.965  7.918  0.996  0.869  -0.559 0.353  "C9'"  TLB 23 
TLB H1P    H1P  H 0 1 N N N 6.554  7.473  -2.176 -1.476 5.148  2.934  H1P    TLB 24 
TLB H3P    H3P  H 0 1 N N N 0.147  -0.894 0.287  -1.132 4.363  -0.003 H3P    TLB 25 
TLB "H5'1" 1H5* H 0 0 N N N 2.411  8.602  -3.222 -1.148 1.706  3.229  "H5'1" TLB 26 
TLB "H5'2" 2H5* H 0 0 N N N 2.570  9.871  -1.995 -0.973 1.259  1.512  "H5'2" TLB 27 
TLB H3     H3   H 0 1 N N N 0.675  8.520  -1.645 0.733  0.243  3.836  H3     TLB 28 
TLB "H3'"  H3*  H 0 1 N N N -0.012 9.280  0.544  3.110  -0.164 1.350  "H3'"  TLB 29 
TLB "H2'"  H2*  H 0 1 N N N 0.307  6.998  1.378  1.999  -2.516 1.981  "H2'"  TLB 30 
TLB "H1'"  H1*  H 0 1 N N N -0.137 6.146  -0.757 0.456  -2.385 3.922  "H1'"  TLB 31 
TLB HB     HB   H 0 1 N N N -0.053 1.707  0.183  -1.297 -6.487 2.768  HB     TLB 32 
TLB H6     H6   H 0 1 N N N 4.617  1.679  -0.564 -3.936 -4.194 -0.478 H6     TLB 33 
TLB H5M1   1H5M H 0 0 N N N 5.041  3.411  -0.584 -3.919 -2.518 0.115  H5M1   TLB 34 
TLB H5M2   2H5M H 0 0 N N N 4.814  2.581  0.973  -4.882 -3.745 0.958  H5M2   TLB 35 
TLB HA     HA   H 0 1 N N N 3.335  5.074  -0.334 -2.038 -1.920 1.466  HA     TLB 36 
TLB "H9'1" 1H9* H 0 0 N N N 3.211  8.590  1.811  -0.001 0.000  0.002  "H9'1" TLB 37 
TLB "H9'2" 2H9* H 0 0 N N N 3.820  7.720  0.363  1.692  -0.424 -0.357 "H9'2" TLB 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TLB O2P   P      DOUB N N 1  
TLB P     O1P    SING N N 2  
TLB P     O3P    SING N N 3  
TLB P     "O5'"  SING N N 4  
TLB O1P   H1P    SING N N 5  
TLB O3P   H3P    SING N N 6  
TLB "O5'" "C5'"  SING N N 7  
TLB "C5'" "C4'"  SING N N 8  
TLB "C5'" "H5'1" SING N N 9  
TLB "C5'" "H5'2" SING N N 10 
TLB "C4'" "O4'"  SING N N 11 
TLB "C4'" "C3'"  SING N N 12 
TLB "C4'" H3     SING N N 13 
TLB "O4'" "C1'"  SING N N 14 
TLB "C3'" "O3'"  SING N N 15 
TLB "C3'" "C2'"  SING N N 16 
TLB "C3'" "C9'"  SING N N 17 
TLB "O3'" "H3'"  SING N N 18 
TLB "C2'" "O2'"  SING N N 19 
TLB "C2'" "C1'"  SING N N 20 
TLB "C2'" "H2'"  SING N N 21 
TLB "O2'" "C9'"  SING N N 22 
TLB "C1'" N1     SING N N 23 
TLB "C1'" "H1'"  SING N N 24 
TLB N1    C2     SING N N 25 
TLB N1    C6     SING N N 26 
TLB C2    O2     DOUB N N 27 
TLB C2    N3     SING N N 28 
TLB N3    C4     SING N N 29 
TLB N3    HB     SING N N 30 
TLB C4    O4     DOUB N N 31 
TLB C4    C5     SING N N 32 
TLB C5    C5M    SING N N 33 
TLB C5    C6     DOUB N N 34 
TLB C5M   H6     SING N N 35 
TLB C5M   H5M1   SING N N 36 
TLB C5M   H5M2   SING N N 37 
TLB C6    HA     SING N N 38 
TLB "C9'" "H9'1" SING N N 39 
TLB "C9'" "H9'2" SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TLB SMILES           ACDLabs              10.04 "O=C1C(=CN(C(=O)N1)C3OC(C2(O)COC23)COP(=O)(O)O)C"                                                                                                              
TLB SMILES_CANONICAL CACTVS               3.341 "CC1=CN([C@@H]2O[C@H](CO[P](O)(O)=O)[C@]3(O)CO[C@H]23)C(=O)NC1=O"                                                                                              
TLB SMILES           CACTVS               3.341 "CC1=CN([CH]2O[CH](CO[P](O)(O)=O)[C]3(O)CO[CH]23)C(=O)NC1=O"                                                                                                   
TLB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)NC1=O)[C@H]2[C@@H]3[C@@](CO3)([C@H](O2)COP(=O)(O)O)O"                                                                                             
TLB SMILES           "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)NC1=O)C2C3C(CO3)(C(O2)COP(=O)(O)O)O"                                                                                                              
TLB InChI            InChI                1.03  "InChI=1S/C11H15N2O9P/c1-5-2-13(10(15)12-8(5)14)9-7-11(16,4-20-7)6(22-9)3-21-23(17,18)19/h2,6-7,9,16H,3-4H2,1H3,(H,12,14,15)(H2,17,18,19)/t6-,7-,9-,11-/m1/s1" 
TLB InChIKey         InChI                1.03  PZOSKPASRDLNLU-LUQPRHOASA-N                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
TLB "SYSTEMATIC NAME" ACDLabs              10.04 "[(1R,2R,4R,5S)-1-hydroxy-4-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,6-dioxabicyclo[3.2.0]hept-2-yl]methyl dihydrogen phosphate" 
TLB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R,2R,4R,5S)-1-hydroxy-4-(5-methyl-2,4-dioxo-pyrimidin-1-yl)-3,6-dioxabicyclo[3.2.0]heptan-2-yl]methyl dihydrogen phosphate"              
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TLB "Create component"  2003-02-07 RCSB 
TLB "Modify descriptor" 2011-06-04 RCSB 
# 
